Dendroctonus ponderosae (mountain pine beetle): 109542019
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Entry
109542019 CDS
T04899
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109542019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109542019
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
109542019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_8
TPR_17
TPR_16
TPR_19
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_6
ANAPC3
TPR_9
TPR_7
TPR_15
TPR_21
ARM_TT21_C
TPR_COPA_B
BDI_1685-like_C
DUF7017
HTH_11
FAT
Motif
Other DBs
NCBI-GeneID:
109542019
NCBI-ProteinID:
XP_019766605
UniProt:
A0AAR5Q025
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MDIKTLLKQARAALKAKDFAAALKVSKSIVKQDKNSYMGLVFLGLALQEVGPTHQALKAF
QKAIDLDAANPLAWQGLVSYHEKLNSDSSQTELLKLYQAYLAIETNEAKLLEYAKRLSGL
NGQGDALETCKVLLSTANKCSTEARVEIAKLVAHHLESGVETKLLDLYEACLELLLPSAA
VSEGFYSSYITVLNKSRQMLRVLDHSQKMHELFPSSVVALSWICKVFNEMSIEENSEVDS
ITPKIGGFTAKLLNLEPANAMALFTQAVLLFRDRNVFEAREKLLLVTKQRQGLVYAWVLL
TDVLIRLRLSSEALASLARSQKLVRSLTNPVLLHKVRIQHLEILSLSDNVDDWQKCLDIA
AEDVDQNQCLGPLIRASVNLQEFSLAENHISALESLKPEAAHAFKIRLYRKQGKYTAAQQ
LIEEFTCNSTDWWIEVGLLHWEMGQFSKCLDPFLKAAKCDPSNFACFVHLGQYYNRVGHL
DKARRCYEKAFKLNPASPEAGSELSKVYRKLKNWESNLSLLLNLTEGLVDSANVWAWLQL
GLTYLEQGNPVNALEYLRIVIRIDPENTNCWESLGDAYFAKGAFTSALKCYQKALDLSEF
SLYSALQVAYIKKVLGDYVEAQADFEAILTRSNQYVPALKGLSETCLCQARECLKNQRLG
AARDFVQDAVNKVTLAITQRSELTCLWKLLADCVMFVAQLPEKYSCLKLPHLPASGSPQK
SAILEQTELFEWATKFYCKAVSSAEDNPFLWHDLGTCYLQYACNHNDPVKKNELLNNAIS
IAQHCTSLNPEYWQHWNLLGVAAVLREPPNYALAQHSFIKAVIAESNSAVAWTNLGILYL
RMEDLELANKAFGEGQRSDPNYVNCWIGQAIIAEXMXHSDAMGLFRHSTQLQQHQEGSLG
YGHXVCDSLINRKCNDKSWEYNINNMHAIPAAFDNVLWFTEKSPDSSCAWNMLGILAERM
GLLGSAKKAFKHALVLAERAHKDLARTNYGRLLYRTGEYEEAIEMFSHVEAATFSSGAGF
ALALFRNGQYEESYAAYEQALHWLTEEQTSQSELLVALASMAYKFQGADAAKTLLFQSIG
LNPPSPWSLYATFALSLLQKDWKLSQLVLKELVALETSSFGLNHNQPEFIYHYATLLSQF
YLLKNDRKEALAGLSRLVHKYPNIGSTWLSLSQMILRLEVDKGRLQAGANCANIALKLGQ
RHMDASKVQCLAALSFQRAGDWKRAALFAQKAIHLCPDQADGWATLIRPLQSLQAGELCQ
KLPGYFARVECNETIRSWVQKVLSVDLMRPISKATFFVKKAFSASCA
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaagacgttgttgaagcaggcgagagcagcactgaaagccaaagattttgct
gccgcccttaaagtttccaagtcgatcgtcaagcaagacaagaacagctacatggggctg
gtgtttctagggctagcgctccaagaagttggcccgacgcatcaggcgctgaaggccttt
cagaaggcaatcgatctggacgctgccaatccgttggcttggcaaggcctggtcagctac
catgaaaagctcaacagcgacagctctcaaaccgagttgctcaagttgtaccaggcctat
ttggcaattgaaaccaatgaggccaagcttcttgagtatgctaaaagactgtcagggctg
aacggccagggagatgctctggaaacttgcaaggtgttgttgagtacagccaacaaatgc
tcgactgaggctcgagtggagattgccaaactcgtggcacatcatttggagtcgggggtt
gaaactaaacttctggatctgtatgaagcctgcctggaactgctactgccgtccgccgca
gtgtccgaggggttctactccagctatatcactgtgctgaacaagagtcggcaaatgctt
cgggttttagatcattcgcagaaaatgcatgaactctttccatccagtgtggtcgccctc
agttggatctgcaaagtgttcaatgaaatgtccatcgaggaaaactctgaggtggactca
attacgccaaaaattggcggctttaccgccaaactcctcaatctcgaacctgccaacgct
atggctttattcacgcaagctgttctcctcttcagggaccgcaatgttttcgaagctcga
gaaaagctgctgcttgtaaccaagcaaaggcaggggttggtttatgcctgggtgttactc
acggacgttctgatccggctgcgtttgagcagcgaggctttggcatctctagccagaagc
caaaagctggtgcgttccttaaccaaccctgttttgcttcataaggtccggattcaacat
ctggaaattctgtcgttatcagacaacgtggatgattggcaaaagtgcctggatattgct
gcggaggatgtggatcagaatcagtgcctaggacctctgataagagctagtgtcaatttg
caggagttttccctagcagagaaccacatttccgctctagagtcgcttaaacccgaagcg
gcccacgctttcaagatccgtctgtatagaaaacagggcaaatatacagcagcgcagcag
ctaattgaagaattcacttgcaactccactgactggtggatcgaagtgggcctactccac
tgggaaatggggcaattttccaagtgccttgacccatttttaaaggcagccaaatgcgat
cccagcaatttcgcgtgctttgtccatttgggccaatactacaatagagtgggccacttg
gacaaggcaaggcgctgctatgaaaaggcgttcaaactcaatcccgcctccccggaggcg
ggcagtgaattgagcaaagtttaccgaaagctgaagaattgggagtccaacttgtccttg
ctgctcaatttaaccgagggcttagtggatagcgcaaatgtgtgggcctggctgcaactg
ggtttgacctacttggaacaaggaaatcccgtcaatgctttggagtatctcagaatcgtt
atccgaattgacccggaaaacacaaattgctgggagtctttgggcgacgcctattttgca
aagggcgccttcacctcggccttaaagtgctaccaaaaagccttggacctatcggagttt
tccctctactcggctttgcaagtggcctacatcaaaaaggttttgggcgactatgtggag
gctcaggccgactttgaggccatcctcacgcgcagcaaccagtacgtgcccgcgcttaaa
ggccttagcgaaacttgcctttgccaggcgagagaatgtttgaaaaaccaacgacttggt
gctgctagggattttgtgcaggatgcggtcaataaggtgactttggccataacacaaaga
agcgagctgacttgcctgtggaagctgctggcggactgtgtgatgtttgtggcccaactt
ccagaaaaatactcctgcctcaagttgccccacttgcctgcttcgggcagcccgcagaaa
tcagcgatcctggagcaaaccgagctgtttgaatgggcgacgaagttctactgtaaagcc
gtgagttcagccgaagacaatccgtttctgtggcacgacttgggcacttgctacctgcag
tatgcgtgcaatcacaacgacccagtgaagaagaacgaacttctcaacaacgccattagc
attgcccagcattgcacctccctgaatcctgagtattggcagcattggaaccttctaggc
gtcgcggcggttcttagagagccccccaattacgcgctggcacaacacagctttatcaag
gctgtgatagcggagagcaacagtgctgtcgcttggaccaacttgggaatcctgtacctg
cggatggaggatctggagctggccaataaggctttcggagaaggccagcgatcggatccc
aactacgtcaactgctggattggccaagcgattattgcagaarcgatggrgcatagcgac
gcaatggggctgttcaggcacagcactcagctgcagcagcatcaggaggggagtcttggg
tatgggcattgsgtgtgcgactccttgatcaaccgcaaatgcaacgacaagtcctgggag
tacaacatcaacaacatgcacgccatcccggcggcctttgataatgtsctgtggttcact
gaaaagagtcccgacagcagctgcgcatggaacatgctgggtatcctggccgaaagaatg
gggctgttgggctcggccaagaaggctttcaagcacgccctagtcctggccgagcgcgcc
cataaagaccttgcgcggaccaactacggaagattgctgtatcggactggggaatatgag
gaggcgattgaaatgttctcccatgtggaggcagccacgttcagcagcggggctggattc
gctctggctctattcagaaatggccaatatgaggagtcctacgcggcttacgagcaagcc
ctccattggctcacagaagaacaaacgtcgcagtcggaactgttggtcgctttagcctcc
atggcctataagtttcagggcgccgatgccgccaaaactctcctatttcaaagtatcggc
ttaaacccgccgtcgccttggagtttatatgccacgttcgccctctccctgctccagaag
gactggaagttgagccagctagtcctcaaagagctggtcgctttggaaaccagctccttc
ggactcaaccacaaccagccggagtttatttaccactatgccacgctcttgtcgcagttt
tacctactgaagaacgaccggaaggaggcgctggccggattgagccgtttggttcacaag
tatcccaacataggctccacttggttgagcttatcgcagatgattctgaggctggaagtg
gacaaaggccgactgcaagcaggcgcgaactgcgccaatatcgcactgaaactcggacag
cgccacatggacgcttccaaggtgcagtgcttggcagctctgtccttccaaagggccggc
gactggaaaagagcggcgctcttcgcgcagaaagccatccatttatgtccagaccaggcg
gacggatgggccacgttgattcggccgctccaaagcctgcaggctggggaactctgccaa
aagctgcctggctactttgcccgtgttgaatgcaacgaaactatccgaagttgggtgcag
aaggtgttaagtgttgatctaatgcgtccaattagcaaagcgacatttttcgttaaaaag
gcttttagcgcttcatgtgcttag
DBGET
integrated database retrieval system
