Drosophila persimilis: 6592945
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Entry
6592945 CDS
T01063
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dpe
Drosophila persimilis
Pathway
dpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6592945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpe03019
]
6592945
Messenger RNA biogenesis [BR:
dpe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6592945
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6592945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NCU-G1
DUF4327
Motif
Other DBs
NCBI-GeneID:
6592945
NCBI-ProteinID:
XP_026842727
LinkDB
All DBs
Position
Unknown
AA seq
2544 aa
AA seq
DB search
MNVENLKTPPTQLRNLVKHVNKRNFNETSEQINQFIKDHGLEADRSSLRYLFTAINFSDP
SPTVTVQLQAKLLGGQLQRQLQSSSFVSNICFAFDQHFANSQKSLKPSETAELIGQVCRL
TGINKLCECVFALAVTHSSHPELRESARDCLRGSITELLDSYLGNNNSSSATSGLQDISI
DLLQYLLCCLKIYVTPKLHEQFLIKLREEFPRQAVPLILAPFLYGSTTAATSNPVRANAS
ETDAEAEATTTTEIETASSSISPSTSSNSCGTDALNEVGIEDIYDHLSEIIFTNQGKNNI
MDTSWINLILEIGYEFTSSVEECKNHLCSRERERTELQPKDVAKIVGLMCRRHSSLLDCN
VNLPTPANFWPGQGQGGGSNSSGGSSQAQATPAQQGQNSSSNSNNNDGASDGGGSSSSDK
KDKKETTDATQTWKPDVFVQALKELVPQLNWKDVCIELDHPEFVLKDRIGLDLLLTILRL
ATQSNIFPHPECIYRHWANTEGQLSLISTLLKNPDLFSFADFVFSQPTLDVLKTAPDADN
KEISAWKSLHLVEVLLSIADKGYYTQVHELFKFPAQNCPDVLFLALLHINPPLTPLRQDL
FNLLIPTFLNNHPNSNVILASAWSSTNFSLRPNIMNAMSEWYLRSSDFDQVKLSRILDLA
QDLKALSSLLNARSFLFIIDLACLASRREYLKLEKWLTDKIRDHGEPFMQAMIKVLLRRC
PQVANAKVPEEQLPPKQAQLLPETVTTMINSLQTCINSCMQPEMVEMIMQMTANVAIMAN
KARAQQQQQQQQQQQPGLVPPPPPSILRHRGMDLPGGIVPPSPQQQQQQQQPFSGSLNAQ
QMFGPGIDPLTNMSNNLAGLNLSGPNGAFNFGNMLTSPSRLMGPGGSPYPLNPMQMPQPL
PPPPNVGNLGRMLPGGSQQPPTPSSAPPTAPNPNNPVMADLQIPVSKEVEDEVNSYFQRI
YNHQPNPTLSIDEVLDILQRFKESSNRREQEVFLCMLRNLFEEYRFFCQYPEKELQITAQ
LFGGIIDRNLVPTFVALGLSLRCVLDALRKPDGSKLYYFGVTALDRFKTRLHTYNKYCEH
IRSIPHFSDFPQHLIQYVEYGMHGQEPPPHKLVGLSNTISALATGPPTEPLYRTSAMQGH
VPATAAPSSGQKPTVAVSHATRMKSIANATNIDTLLVANQEEKVTVPPEPVQDKTAFIFN
NLSQLNIPQKCDEIKEIMTQEYWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNGEINRF
VTKETLRNIKVLLRSDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEA
YHKGQQELLFVVPFVAKILESSAKSKIFRSPNPWTMGIMYVLGELHQEPDLKLNLKFEIE
VLCKTLNLELAKLRPVIYLKDPTRALHIEQQMSQPKPKQTESVPSPAQQQQQQQQQQQPP
PQQQQQQQQQQQPPPPPPAEVDAAQAAAMMMNAAGGGSNNASGSVASPSLPIDPSQVSLP
PPEPRYSYVEVNVTNFQLIAQQLVLPPNIPFLHANPGIKHIVINAVERTITDWLQPVVDR
SIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQNLHK
AFVSALTGMPSLSEIQAASMQLASENVELVCAFIQKTSAEKAALEIDRRLSTDIETRKIA
REEGSRFVDAQILSYQQERLPEAVRIKVGAAPATLYAVYSEFARTIPGFQQMSDRDIALF
APKPQDLPPPNVFANDDSSMVYAEVAAKMEAFMNTAINVPTLQLQAGKMHMLLNALMSTR
RLRDQESAFILLTRAVEGLTEGLINVQEHLEQMKLYRDIHLRILSLLHNSFGAPNTERAV
TKCFFEIREEARFNVEAARALITAHFVNLNQFDGMLRDCMDNGNNYMAISFGIGLIERLI
VEDRAINIVSDNEFMATVELLGRLTQHRHRYPECIVNAIDTLWSGNFNSTADYSPFNANE
RSLAGASQYIHSGMLHVRSCDTDDPPGLQEKTEFLLKDWVALYAQQTQQTTRDARNFGAF
VQKMNTYGILKTDDLITRFFRQATNICTDVVYRMFADPSMPINQAKNKIFQWIDAFVHLI
AMLVRHSGEPGNPTTKINLLNKVLGIVLGTLLKDHEMRGVSFQQVGYHRFFMMLFMELCS
ADVNLDSLMHSIVSAFAYTYHQLKPSVAPGFCFAWLELISHRVFLGRILVQIPGQKGWPL
YAQLLQDLFKYLAPFLRNTELGKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDTIPP
NCVQMRNIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAPKVLSSYIVNIKPPNFKKDLDS
YLKARAPVTFLSELRGHLQVTSEPGTRYNMTLMNALVMYVGTQAIALIRNKNFVPNTSNI
AHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQE
QITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEITKLFESVARSCLA
KSNVTQQLNMAIVDGESQEVGNIN
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagagaacttgaaaacaccgccaacgcagcttcgtaatttggtcaaacacgtg
aacaagcgaaattttaatgaaaccagcgagcaaataaaccagttcatcaaagaccacggc
ctggaagctgatcgtagcagtctgcgctatctgttcactgcgatcaacttcagtgaccca
tcgccgaccgtcaccgtccagttgcaagccaaattactcggtggccagttgcagcggcag
ttgcaaagctcctcgtttgtgtccaacatctgcttcgcgtttgaccagcactttgccaac
agccaaaagtctctcaagccgtctgagacagcagagctcattggccaggtgtgcagactg
accggcataaacaagctctgcgagtgcgtatttgccttggcggtgacccactcgtcgcat
ccagagcttcgagaatcggccagagactgcttgcgaggttccataaccgagctgctcgat
tcctatttggggaacaacaacagctcctcagctaccagtggactgcaagatatatcgatc
gatcttctgcagtatttgctgtgctgcctcaaaatttacgtgacgccgaagctgcacgag
caatttttgatcaaactacgtgaggagtttccgcggcaggcggtgcctttgattttggcg
ccattcctttacggctcaacgacggcggcgacctcgaatccagttagggccaacgccagc
gaaactgatgcagaggctgaggcaacgacaacgacagagatagagacggccagcagcagc
atcagccccagcaccagcagcaacagttgcggcacggatgccttgaatgaggttggaatc
gaggatatctatgatcatttaagcgaaataatattcacaaaccagggtaaaaataatatt
atggacacatcttggattaatctaatccttgaaatcggttacgaatttacatcgagcgtc
gaagagtgtaaaaatcacctgtgctctcgcgaacgagagcgcaccgaactccagccaaaa
gatgttgccaaaatcgttggtctcatgtgccggcggcactcgtctttgctcgattgtaat
gtaaatctaccgacgccagctaatttctggcctggacagggtcaaggcggtggcagcaac
agtagcgggggctcgtcacaagcacaggccaccccagcgcagcagggacagaactcaagc
agcaacagtaacaacaacgatggagccagcgacggtggaggcagctcgtccagtgataag
aaggacaagaaggagacgacagatgccacacagacatggaagccggatgtctttgtgcag
gcactcaaggaactggtgccacagctcaactggaaggacgtttgcattgagctcgatcat
cccgagtttgtgctgaaggatcgcatcggcttggacctgctgttgacaattctgcgactg
gccacacagtcgaacatctttccacatccagaatgcatttaccgccactgggccaacacg
gagggtcagctgtcgctgatctctacgctgctaaagaatccggatctgttctcctttgcc
gactttgtgttcagtcagccaacgctggatgtcctgaagacggcaccggatgcggacaat
aaggagatttcggcctggaagtccctccaccttgtcgaggtcctgctctctattgcggac
aagggctactacacgcaggtccatgagctgttcaagttccctgcacagaactgcccggac
gtcctgtttttggcactgctgcacataaatccaccactgacaccgctgcggcaggacttg
ttcaatttgctgataccgacgttcctcaacaatcatcccaactcgaatgtgatcctggcc
agcgcctggagctcgaccaacttctcgctgcggccgaacattatgaacgccatgtccgag
tggtatctgcgtagcagcgactttgatcaggtgaagctgtcgcgcattctcgatctcgcc
caggacctgaaggccctctcgtcgctcctgaatgcacgctcctttctgttcatcatcgat
ctggcttgcctggcctccaggcgggagtacttgaagctggagaaatggctgaccgataag
atccgcgatcatggtgagcccttcatgcaggccatgataaaggtgctgctgcggcgctgc
ccacaggtggccaatgccaaggtgcccgaggaacagttgccaccgaaacaggcccagctg
ctgcccgagacggtaaccacgatgatcaattccctccagacgtgcatcaacagttgcatg
cagcccgagatggtcgagatgatcatgcagatgaccgccaatgtggccattatggcgaat
aaggcacgtgcccaacagcagcagcagcagcaacaacaacagcagcccggtctggtgccg
ccaccgccgccgagtattctgcgtcatcgcgggatggatctacccggaggcattgttccc
ccatcaccgcagcagcagcagcaacagcagcagcccttctccggcagcctcaatgcccag
caaatgtttggccccggcatagatccactcaccaatatgtcaaacaatctggcaggcctc
aatctgagtggaccgaatggagccttcaactttggaaatatgttaacatctccgtcccgc
ctgatgggtcccggaggcagcccctatcctctgaatcccatgcagatgccgcagccacta
ccgccgccaccgaatgtcggaaatctgggtcgcatgctacccgggggatcgcaacagccg
ccgacaccatcatcggcaccgccgacggcacccaatcccaacaatccggtgatggctgac
ctgcagatacccgtgtccaaggaggtggaggatgaggtgaactcgtatttccaacgcata
tacaaccatcagcccaatccgacgctctcgattgacgaagtgctggacatactgcagcgc
ttcaaggagtccagcaatcgacgggagcaggaggtcttcctgtgcatgctgcgaaacctg
ttcgaggagtatcgcttcttctgccagtatccggaaaaggagctacagatcaccgctcaa
ctgtttggcggcatcatagaccgcaacctggtgcccactttcgtggcgctcggtctctcg
ctgcgctgcgtcctggatgccctgcgcaagccagacggctccaagctctattactttgga
gtgacggccctcgatcgtttcaagacacgactccacacatacaacaagtactgcgagcat
atccgctccattccgcacttctcggactttccgcagcacctcatccagtatgtggaatat
gggatgcacggccaggagcccccgccgcataagctggtgggcctgagcaacacaatctcg
gccctggccacaggaccaccgacggaaccgctctatcgcactagtgccatgcaaggtcat
gtgccggcaactgcagctcccagctccggccagaagcccactgtggctgtgtcgcatgcc
acgcgcatgaagtccattgccaatgcgacgaatatcgacactctgctggtggccaatcag
gaggagaaggtgacggtgccgccggaaccggtgcaggacaagacggcctttatattcaac
aatctcagtcagctgaacataccgcaaaagtgcgatgagatcaaggagattatgacccag
gagtattggccatggctggcccagtatctagtcctcaagcgagcctccatggagttcaac
tttcacacgctctactacaactttctggatgcgctcaagaacggcgagatcaatcgtttt
gtgaccaaggagacgctgcgcaacatcaaggtgctgctgcgctccgacaagggtgtgatc
aacttctcggaccgcagtctgctgaagaatctcggccactggctgggcatgatgaccctg
ggtcgcaaccgacccattctgcagcttgacctcgatctcaagtcgctactggccgaggcc
tatcacaaggggcagcaggagctactgttcgttgtgccttttgtggcaaagatcttggaa
tcgtcggcaaagtcgaaaatcttccgatcccccaatccctggacaatgggcatcatgtat
gtgctgggggaactgcatcaggagccggatctcaagctgaaccttaagttcgaaatcgaa
gttctctgcaaaacactcaatctggagttggccaagttgcggccagtcatctacctgaag
gatcccacccgggccctgcacatcgagcagcaaatgtcccagccgaagcccaagcagacg
gaatctgtgccttcgccggcacagcaacaacaacaacaacagcagcagcagcagccgcca
ccacagcaacaacagcagcagcagcagcaacagcaacctcctccaccgcctccagcggag
gtggatgccgcccaggcggcagccatgatgatgaacgctgctggaggaggctcgaacaac
gcatcaggatcggttgcctcgcccagtctgcccatcgatcccagtcaggtgtccctgcca
cctccagagccacgctactcttacgtggaggtcaacgtgaccaacttccagctaatagcc
cagcagctggtgctgccacccaacatacccttcctgcacgccaatccgggcatcaagcac
atcgtcataaatgccgtggagcgcaccattaccgattggctgcagcccgtcgtggatcgc
agcatccgcatcgcctgcgccaccacagagcagatcatacgcaaggactttgccctggat
gcggatgagaaccgcatgcgcacagctgcccaccaaatggtgcgcaatctggctgccggc
atggccatgattaccggcaaagacgagatcgcgcgcgccattagccagaatctacacaaa
gcctttgtgtcggctctgacgggcatgcccagcctctcagagattcaggccgcctccatg
cagctggccagcgagaatgtggagctggtgtgcgccttcatccagaagacatcggccgag
aaggcggccctcgagatcgatcggcgcctttccaccgacatcgagacgcggaagattgcc
cgcgaggagggaagtcgctttgtggatgcccagatcttgagctatcagcaggagcgactg
cccgaggctgtgcgcatcaaggtgggcgctgccccggccacactgtatgcggtctactcg
gagtttgctcgcaccattccgggattccagcagatgagcgacagggacattgccctgttc
gctcccaagccgcaggacctgccaccgccgaatgtgttcgccaacgatgacagcagcatg
gtgtacgccgaagtggccgccaaaatggaggcctttatgaacacggccattaatgtgccg
acgctgcagctgcaggccggcaaaatgcacatgctcctcaacgccctgatgtccacgcgt
cgtctgcgcgatcaggagtctgcgttcattctgctgacccgcgccgtcgagggtctcacc
gagggactcatcaacgtccaggagcacttggagcagatgaagctatatcgcgacattcac
ctgcgcatcctcagtctgctgcacaacagctttggggcccccaacaccgagcgagcggtg
accaagtgcttcttcgaaatccgcgaggaagcccgcttcaacgtggaggccgcccgtgcc
ctgatcactgcgcactttgtcaacctcaatcagttcgatggaatgctgcgcgactgcatg
gacaatggcaacaattacatggccatctcgtttggaattggtctgatcgagcgccttatt
gtggaggatcgtgccattaacattgtgtccgacaacgagttcatggccaccgtcgagctg
ctcggccgtctcacccaacatcgccatcggtatcccgagtgcattgtcaatgccatcgat
acactgtggtccggcaacttcaactccaccgctgactacagtccgttcaatgccaacgag
cgttctctggccggtgcctcccagtacatacactccggcatgcttcacgttaggtcatgc
gacacagacgatccgccaggcttgcaggagaagaccgagttcttgctcaaggactgggtg
gccctctacgcacagcagacccaacagacgacgcgcgatgcccggaactttggggccttt
gtccagaagatgaacacctatgggatactaaagacagacgatttgatcacacgcttcttc
cggcaggcgacgaacatctgcacggatgtggtgtaccgcatgtttgcggatccgagcatg
cccattaaccaggcgaagaacaagatattccagtggatcgatgcgtttgtgcatctgatt
gcgatgctcgtgcgacactctggcgaaccgggtaaccccacaaccaagatcaacctgctg
aacaaggtgctgggcattgtgctgggcacactgctcaaggatcacgagatgcgtggcgtt
agcttccagcaggtgggctaccaccggttcttcatgatgctcttcatggagctgtgctcg
gccgatgtcaacctggactcgctgatgcacagcattgtgtcggcgtttgcctacacatac
caccagctcaaacccagtgtggcgcccggcttctgctttgcctggctggagctcatttca
caccgcgtcttcctcggccggatactcgttcagatacccggccagaagggctggccgctg
tacgcccagctgctgcaggatcttttcaaatatctggctccattcttgcgcaacacggag
ctgggcaaacccgtgcagctcctctacaagggcaccttgcgcgtcctgctggtgctgctg
cacgactttccagagttcctgtgcgactatcatttcgggttctgcgacaccataccgccc
aactgtgttcagatgcgcaacatcatcctgtcggcattcccgcgcaacatgcgcctgccc
gaccccttcacgcccaacctcaaggtggacatgctctcggacagcagcaatgcccccaag
gtgctcagcagctacatcgtgaacatcaagccgccgaacttcaagaaggacctcgactct
tacctcaaggcacgcgccccagtcaccttcctctcggagctgcgcggccatctgcaggtg
accagtgagccgggcacccgctacaacatgacactgatgaatgccctggtcatgtatgtg
ggcacacaggcgattgctctcatcaggaacaaaaactttgtgcccaacacttccaatatt
gcacacagcgcgcacatggatatcttccagaatctggccgttgacttggacactgagggt
cgctatctgttcctcaatgcgattgccaatcagttgcggtatcccaacagccacacgcac
tactttagctgtgccgtcttgcacttgtttgccgaggcaaactcggaggcgatccaggag
caaatcacgcgtgttctactcgagcgtttgattgtgaaccggccgcatccgtggggtctg
ctcatcaccttcattgagctgatcaagaaccccatctacaagttctgggatcacgatttt
gtgcactgtgctccggagataaccaagctcttcgaatctgtggctcgctcctgcctggcc
aagtcgaacgtcacccagcagctgaacatggccatcgtcgatggagagagccaggaggtg
ggcaacattaactga
DBGET
integrated database retrieval system
