Desulfovibrio piger: DESPIGER_0199
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Entry
DESPIGER_0199 CDS
T04638
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
dpg
Desulfovibrio piger
Brite
KEGG Orthology (KO) [BR:
dpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpg03016
]
DESPIGER_0199
03036 Chromosome and associated proteins [BR:
dpg03036
]
DESPIGER_0199
Transfer RNA biogenesis [BR:
dpg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DESPIGER_0199
Prokaryotic type
DESPIGER_0199
Chromosome and associated proteins [BR:
dpg03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
DESPIGER_0199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
Pyr_redox
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
SFV72101
UniProt:
A0A1K1LBM0
LinkDB
All DBs
Position
I:complement(194135..196027)
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AA seq
630 aa
AA seq
DB search
MTGGGHAGSEAAVALARLGLRVLLVSGNVDRLGYLSCNPAIGGLAKGHMVREIDALGGMM
GLWADAGGIQFRTLNMSKGPAVRATRAQIDREAYQKVLKKTLFSTPGLRIWQDSVTEVLE
ENGHASGVRTAQGLTFHARHVLLTTGTFLAGLIHIGLTHLPGGRLGDAPATGLSDSLRRL
GLTLGRLKTGTTPRLLRASIDFSRLEEQPGDTPPPRFSFRGPGPVLPQVPCHITWTNEAA
HAAIRSGFDRSPLFTGVIQGTGARYCPSIEDKVARFPERERHQIFLEPEGLDSPEVYANG
ISTSLPLDVQEAMLHAIPGLEHAVMVRPGYAIEYDYANPVQLHGTLETKALPGLWLAGQI
NGTSGYEEAAAQGLWAALNIACREKELDPFVPGRDSSYMAVLVDDLVTSGTEEPYRMFTS
RAEHRLLLREDNADVRLTPLGRKIGLVGEEQWRLFNDKMEHGHAVRRLLQQVRVQLSDGE
EAEQAAPATPEETELRTALRGRTLEEALRRPDMDLERLARLSAPLAEALADRDPRDLETV
QVDVKYAGYLERQRELIARAARLESVELPADLDYRQVAGLSREVEEKLDRVRPRNLGQAG
RISGVTPAAVGCLEIHLHKLGLLRGRRQSL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtgacaggcggcggccatgccggttccgaggccgccgtggccctggcccgcctgggcctg
cgcgtgctgctggtctccggcaatgtggaccgtctgggctacctgtcctgcaacccggcc
atcggtggtctggccaagggccacatggtgcgcgagatcgacgccctgggcggcatgatg
ggcctgtgggccgatgccgggggcatccagttccgcaccctcaacatgagcaagggcccg
gccgtgcgcgccacccgcgcccagatcgaccgcgaggcctaccagaaggtcctcaagaag
accctgttctccacgcccggcctgcgcatctggcaggactccgtgaccgaggtgctggaa
gagaacggccatgcctccggcgtgcgcacggctcagggcctgaccttccatgcccggcat
gtgctgctcaccaccggtaccttcctggccggcctcatccacatcggcctcacgcatctg
cccggcggccgtctgggcgatgccccggccacgggcctttccgacagcctgcgccgcctg
ggcctcacgctgggccgcctcaagaccggcaccacgccgcgcctgctgcgggcgtccatc
gacttttccaggctggaggaacagcccggcgataccccgccgccgcgcttcagcttccgt
ggtcccggcccggtgctgccgcaggtgccctgccacatcacctggaccaacgaggccgcc
catgcggccatccgctccggcttcgaccgctcgcccctgttcaccggggtcatccagggc
acgggcgcccgctactgcccctccatcgaggacaaggtggcccgcttccccgaacgcgaa
cggcaccagatcttcctggagcccgaaggcctggacagcccggaggtctacgccaacggc
atctccaccagcctgccgctggacgtgcaagaggccatgctccacgccatccccggcctg
gagcatgccgtcatggtgcgccccggctacgccatcgaatacgattacgccaaccccgtg
cagctgcacggcaccctggagaccaaggccctgcccggcctgtggctggcgggccagatc
aacggcacgtccggctatgaagaggccgcggcccagggactgtgggcggccctgaacatc
gcctgccgggaaaaggagctcgaccccttcgtgcccggacgcgattcctcgtacatggcc
gtgctggtggacgacctggtcacctccggcaccgaggagccctaccgcatgttcacctcg
cgggcggagcaccgcctgctgctgcgcgaggacaacgccgacgtgcgcctgaccccgctg
ggccgcaagatcggcctggtgggcgaggagcagtggcgcctcttcaacgacaagatggaa
cacggccacgcggtgcgccgcctgctgcagcaggtgcgcgtccagctgtccgacggcgaa
gaggcggagcaggccgctccggcaacgccggaagagacggagctgcgtaccgcgctgcgc
ggccggaccctggaagaggccctgcgccgtcccgacatggatctggaacgcctggcccgc
ctctccgccccgctggccgaagccctggcggatcgcgacccgcgcgatctggagaccgtc
caggtggacgtcaaatatgcgggctatctggagcgccagcgcgagctcatcgcccgtgcc
gcgcgtctggaatccgtggagctgcccgccgatctggattaccggcaggtggcgggcctt
tcccgcgaggtggaggaaaagctggaccgcgtgcggccccgcaacctcggccaggccggg
cgcatctccggcgtgaccccggcggccgtgggctgtctggagatccatctgcacaagctg
ggcctgctgcgcggcaggcggcagtccctctga
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