Deinococcus psychrotolerans: EHF33_12850
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Entry
EHF33_12850 CDS
T07550
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dph
Deinococcus psychrotolerans
Pathway
dph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHF33_12850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dph03021
]
EHF33_12850
03400 DNA repair and recombination proteins [BR:
dph03400
]
EHF33_12850
Enzymes [BR:
dph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHF33_12850
Transcription machinery [BR:
dph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHF33_12850
DNA repair and recombination proteins [BR:
dph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHF33_12850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AZI43525
UniProt:
A0A3G8YEW6
LinkDB
All DBs
Position
1:2599054..2602497
Genome browser
AA seq
1147 aa
AA seq
DB search
MKPRIERFGEIQEVIKLPTLTEIQVNSFSTFLQEGRPINDRLNAGLQGAFREVFPIDETE
KGRSTGLVLDYLEYRLGDPVYTPEECREKDLTYQAPLYAKLQLIHKDSGLIKEDQVFLGD
LPLMTGDGSFVINGADRVVISQIHRSPGVYFTTNYKGLKKYYTAAIIPMPKRGPWIELEY
AGGILEMKVNKRKFPVAMLLRVLGYDDASLKALFSEFEPDIELPEDKTAGMGADEALLRL
FTVLRPGDPPKRDKATQYLYGLLADPKRYDLGAPGRFKMNTKLGIKRDDSTLLNFVDGKF
TDAGLIDTIRYLMALTNGQTESTVGADADGVAITVPVRPDDIDHLGNRRVRTVGELLADQ
LRVGLGRMARGVRERMLLGNPDAATPTKLVNNRPIVAAMREFFGRSQLSQFKDQTNPLSD
LRHKRRISALGPGGLTRERAGFDVRDVHRTHYGRICPIETPEGANIGLISSLASYAKVNP
LGFIEAPYRRVENGRVTDDVQYMTADIEDRYAVAQANTRLNADGTFAEERVLCRKSGDPS
FYEHADVQYMDVSPKQIVSINTSLIPFLEHDDANRALMGSNMQSQAVPLIRAQSPAVGTG
VEERVITDSGTSVVSDVTGTVTYVDARNIQVTLSEDAPNIDYVKGNVRTFELVRFTRSNQ
GTNLDQHPTVSFGDEVTAGQVIADGPASDMGRLALGQNITIAIMPFDGFNFEDAICISEG
LTRKDFYTSVHIEKDEVEARDTKLGPEKITRDIPGLSEAALRDLDEDGIVRVGADVKPGD
ILVGKTSFKGESEPTPEERLLRSIFGEKAREVKDTSLRVQSGQGGVVVKTVRFRRADEGV
DLKPGVREVVRVYVAQKRQMQVGDKVANRHGNKGVVSKILAPEDMPYLEDGTPVDLVFNP
LGVPSRMNLGQILETHLGEVARLTGQKFVTPVFDSATEIAIKEMLEVAAAERLQARKDEG
FDLDKREQEVLDRAGKLGVIDQPAGEYEKAQRQLSRTGKSILYDGRSGEPISGPVVVGTM
YVMKLYHMVEDKLHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEM
LTIKSDDIDGRDAAYQSIVKGEEVSGSTIPESFKVLVKELHSLGLDVEVLDRHDKNVDIF
EGMLPKR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagccacgcatcgagcgattcggcgagattcaagaagtcattaaactgcccaccctg
accgaaattcaggtcaattcattcagcacctttttgcaagaaggccgtccaatcaatgac
cgcttgaatgcgggtttgcagggcgcgttccgcgaagtttttccgattgacgaaactgag
aaagggcgctccactggccttgttttagattacttagagtaccgcctcggcgatccggtg
tatacccccgaagagtgccgtgaaaaagatttgacgtaccaagcgcctctttacgccaag
ctgcaactcatccacaaagacagcggcctgatcaaagaagatcaggtgttcctcggcgac
ctcccgctgatgactggcgacggctcgttcgtcatcaacggcgcagaccgcgtggtcatt
tcgcagattcaccgcagccccggtgtgtacttcacgaccaattacaagggcctcaagaag
tactacacggcggccattatcccgatgcccaagcgcggtccctggatcgagctggaatac
gcgggcggcatcttagagatgaaggttaacaagcgcaaatttccggtggcgatgttgctg
cgcgtgcttggttacgacgacgccagcctcaaagcgctgttcagcgagtttgagccggat
attgaacttcccgaagacaaaacggcaggcatgggcgcagacgaagccctgctgcgcttg
ttcacggtgctgcgccccggcgacccacccaagcgcgacaaggccacccagtacctctac
ggcctcttggccgatcccaagcgctacgacctcggcgctccgggccgcttcaagatgaac
accaagctgggcatcaagcgcgacgacagcaccctgctcaacttcgtggacggcaagttc
accgacgcgggcctgatcgacaccatccgctacctgatggcgctgaccaacggccaaacc
gagtccaccgtgggcgcggacgccgacggcgtggccatcaccgtaccggttcgccccgac
gacatcgaccacctcggcaaccgccgcgtccgcaccgtgggcgaactgctggccgaccag
cttcgtgtcggcctgggccggatggcgcgtggcgtgcgcgagcgcatgctgctcggcaat
cccgacgctgccactcccaccaagctggtcaacaaccgtcccatcgtggcggccatgcgc
gagttctttggacgctcgcagctcagccagtttaaagaccaaaccaacccgctctccgat
ttgcgccacaagcgccgcatctcggcgctggggccgggcgggctgacccgcgaacgtgcc
ggattcgacgtgcgtgacgttcaccgtacccactacgggcgcatctgcccgattgaaacg
ccggaaggtgccaacatcggtttgatcagctcgctggccagctacgccaaggtcaatccg
ctgggctttatcgaagcgccttaccgccgcgtggaaaatggccgtgtcaccgacgacgtg
cagtacatgaccgccgacattgaggaccgctacgccgtagcgcaggccaacacgcgtctg
aatgccgacggcacctttgctgaagagcgcgtcctttgccgtaaaagcggcgatcccagc
ttctacgagcacgccgacgtgcagtacatggatgtgtcgcccaagcagatcgtttcgatc
aacacctcattgatccctttccttgagcacgatgatgccaaccgcgccctgatgggttcg
aacatgcagtcgcaggccgtgccgctgatccgcgcccaaagccccgctgtgggtactggt
gtggaggagcgcgttatcaccgactcgggaacgagtgtggtcagcgacgtgaccggcacc
gtcacctacgtggacgcccgcaacattcaggtcacgctgagcgaagacgcgcccaacatc
gattacgtcaagggcaatgtccgcacctttgagctggtgcgctttacccgctccaaccaa
ggcaccaacctcgatcagcaccccaccgtctcgttcggggacgaagtcacggcgggtcag
gtcatcgccgacggccccgcttccgacatgggccgcctggcgctgggccagaacatcacc
atcgccatcatgccgtttgacggtttcaacttcgaagacgccatctgcatctccgaaggg
ctgacccgcaaggacttctacacctcggttcacattgagaaagacgaagtggaagcccgc
gacaccaaactggggccggagaagatcacccgcgacatccctggactctcggaagccgcc
ctgcgtgacctcgacgaagacggcatcgtgcgcgtcggagccgacgtcaaacccggcgat
attctggtcggcaagaccagcttcaagggcgaatccgagcccactcctgaagagcgtctg
ctgcgctcgatcttcggcgagaaggcgagagaagtcaaagacacctcgctgcgggtgcag
tcgggtcagggcggcgtggtcgtcaagaccgtgcgtttccgccgtgccgacgagggcgtg
gatctcaagcccggcgtcagagaagtggtgcgcgtttacgtggcccagaagcgtcagatg
caggtgggcgataaggtcgccaaccgccacggcaacaagggcgtcgtttctaagattctg
gcccccgaagatatgccttacctcgaagacggcacgcccgtcgatctggtgttcaacccg
ctgggcgtgccctcgcgcatgaacctgggtcagattttggagacccacctgggcgaggtc
gctcgcttgaccggccagaaattcgtgaccccggtcttcgattcggccaccgagatcgcc
atcaaggaaatgctggaagtcgccgccgcagagcgccttcaggcccgcaaagacgagggc
tttgacctcgacaagcgtgagcaggaagtgctcgaccgcgccgggaagctcggcgtgatc
gaccagcctgcgggcgagtacgaaaaagcccagcgccagctttcacgcaccggcaagagc
atcctgtatgacggacgcagcggcgagccgatcagcggccccgtggtggtcggcaccatg
tacgtgatgaagctctaccacatggtggaagacaagttgcacgcccgcagcaccggcccc
tacagcttgatcacccagcagccgctgggcggcaaggcgcagttcggcggccagcgcttc
ggcgagatggaagtctgggcgctcgaagcctacggcgcggcccacaccctccaggaaatg
ctgaccatcaagtccgacgatattgacggacgcgacgcggcttaccagagcatcgtcaag
ggtgaagaagtctcgggcagcaccattcccgaatcgttcaaagtgctggtcaaggaactc
cactcgctcggtctggatgtggaagtactcgaccgtcacgacaagaacgtggacattttc
gaagggatgttgcccaagcggtaa
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