Pseudodesulfovibrio piezophilus: BN4_10032
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Entry
BN4_10032 CDS
T02481
Symbol
appF
Name
(GenBank) Oligopeptide transport ATP-binding protein AppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN4_10032 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpi02000
]
BN4_10032 (appF)
Transporters [BR:
dpi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BN4_10032 (appF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_16
AAA_22
NACHT
RsgA_GTPase
SMC_N
AAA_29
RNA_helicase
nSTAND1
NB-ARC
AAA_5
nSTAND3
Mg_chelatase
PRK
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
CCH47272
UniProt:
M1WPS9
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All DBs
Position
complement(33617..34621)
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AA seq
334 aa
AA seq
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MNKLLEIKNVDKHFDISGSFLDQLRIEGGKINRKRTVVKAVNNVSLEILPGETLSVVGES
GCGKSTLARTVMGLYQPNNGEILYRGERIDHLSSAKMKPYRTKMQMVFQDPYASLNPRMA
VREILEEPVKFHNPHMSRGEVKETVAEVMLQVGVDPKWASNFPHEFSGGQRQRISIARAL
VLGPEFVAADEPIAALDVSIQAQILNLLMDAQDQRGLTYLFISHDLSVVEHISTRVAVMY
LGCICELATSADLFSTPKHPYTQALLSAIPRLGGQAGGHTRLSGDVPTPINLPSGCVFNG
RCPHANDRCRNEIPLGRSVDDSIVACHAVEEGRI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacttctcgaaataaaaaatgtcgataaacacttcgatatttccgggtctttt
cttgaccaacttcgaattgaaggtggtaaaatcaaccgcaaaagaactgtggtcaaagcg
gttaataatgtaagcttggaaatattgcccggtgaaactctgagcgtcgttggcgagtcc
ggctgtgggaaatccactctggcacggacggtcatgggactttatcagccgaacaacggt
gaaatcctctatcgaggggagcgcatcgaccatttgtcttcggccaagatgaaaccatat
cgtaccaagatgcaaatggtctttcaggacccatatgcttcattgaacccacgtatggct
gtacgagagattcttgaagagccggtaaaattccataatccgcatatgtctcgcggggaa
gtcaaggaaacagtcgccgaagtcatgcttcaagttggcgtggaccccaaatgggcttcc
aacttcccgcatgagttctcaggaggacaacggcaacgtatatccattgctcgtgctctg
gtccttggaccagagtttgtcgctgcggatgaacccattgctgcgcttgatgtctcaatt
caggcacagattctgaatctgctcatggatgcgcaggaccaacgtggattgacatacctc
tttatcagccatgatctgagtgttgtcgagcacatctccacacgtgtcgccgtcatgtat
cttggctgtatctgcgaactggccacatctgctgatttatttagtactcccaaacatcca
tacacacaggcgctgctctcagccattcctcgtctcggcgggcaggctggaggccatacc
agactctctggagatgttccgactcctataaaccttccatctggatgtgtctttaacgga
cgctgccctcacgccaatgatcggtgtagaaacgagattcctcttgggcggtcagttgac
gacagtatcgtcgcctgtcacgcagtggaagaaggacgcatctga
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