Pseudodesulfovibrio piezophilus: BN4_11913
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Entry
BN4_11913 CDS
T02481
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dpi
Pseudodesulfovibrio piezophilus
Pathway
dpi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN4_11913 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpi03400
]
BN4_11913 (exoA)
Enzymes [BR:
dpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BN4_11913 (exoA)
DNA repair and recombination proteins [BR:
dpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BN4_11913 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CCH49148
UniProt:
M1WWI1
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All DBs
Position
complement(2007256..2008023)
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AA seq
255 aa
AA seq
DB search
MIIYSWNVNGYRAVIKKDFRDWLDSCGGDVVMLQETKAHPDQIDEEERAPDSYSNNYWNW
SKKKKGYSGVACFTNPEPLEVLTGLPDDRFNGEGRVLHLEYPDFHLFNIYFPNGQMSEER
LAFKMGFYECFLEHAETLRKDKPIVVGGDFNTAHTEIDLKNPKSNAERSGFLPEERAWVD
KFIAHGYVDTFRLFEDGPHHYSWWSYRFNARKNNAGWRIDYFFVSEELKDKVVRAWIEPE
VMGSDHCPIGVEIDF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgattatttattcgtggaatgtcaatggctaccgcgccgtgatcaaaaaggattttcgg
gattggctcgactcctgcggcggggatgtggtcatgctgcaagagaccaaggcacatcct
gaccagatagacgaggaagagcgcgccccggattcctattccaataactattggaactgg
tccaagaagaaaaaaggttactccggcgtggcctgcttcaccaatccggaacctcttgag
gtgctcacgggattgccggatgaccgattcaatggcgaaggccgggtgttgcatctcgaa
tacccggatttccatctcttcaatatctatttccccaatggacagatgtccgaagaacga
cttgcattcaaaatgggcttctacgagtgttttctggaacatgccgaaacattacggaag
gacaagcccattgtggtcggcggcgatttcaatactgcacataccgagattgatctcaag
aatcccaagtccaatgctgagcgctccggtttcctgcccgaggagcgtgcatgggtcgat
aaattcatcgcccatgggtatgtggacaccttccgtttgttcgaggatggcccgcatcat
tattcctggtggtcctatcgattcaatgccaggaaaaacaacgcgggatggcgcattgat
tatttctttgtctcggaagagttgaaggacaaggttgtcagagcctggatcgagccggaa
gtcatggggtcggatcactgtcccatcggcgtggaaatcgatttttga
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integrated database retrieval system
