Danaus plexippus (monarch butterfly): KGM_208376
Help
Entry
KGM_208376 CDS
T04344
Name
(GenBank) CCR4-NOT transcription complex subunit 1 isoform 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGM_208376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_208376
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KGM_208376
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KGM_208376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-ProteinID:
OWR54280
UniProt:
A0A212FKR2
LinkDB
All DBs
Position
Unknown
AA seq
2384 aa
AA seq
DB search
MNLDPLTFSLSQINYLVVNLNKKNFKQTSQELSQIVSLYGLEAENQLLRCLLSEAAKTWD
ERTASSVHASLLAQHLACLLNHPAKSTVICQAVDQPTRSLQKVLKPTNSLLSRLARLLKF
TTAQDVAFTLVLRRNSSKPDIVSLAKQHLKKRFLDFVQCYLDAERGHQVERAGLQECSPE
VLQTLLTSLAYENFRLAAVTKDLFLKRLRIDFPREVVPIVLAPLLYPDDTQTPLEEMTTS
DDMTAAMMDNTLAEIIRDIGYAFTASVEDCKNNMVNFGAREPTAIDVARIISTMIKYHAT
IQEAPHVQTPGNFWMNHEAKKEAMAHGHVGETWNPEVFVQTLKELASNLNWKEVILQLDH
PEFIVPDRQGLSLLFTILRLGLQSAGYPANIFPVEYLCRRWANLEGQMSLLTNILKHPDI
FSFADHPFHPVSIDLLKSPPETDNKEVSTWRCLYLVELLLYASERGYYLQVHELFKYPLQ
HCPDILLLALLQISPPITVFRQELLTTLIPIFLGNHPNSGIVLQHAWHSQNPNIKPIIMH
AMADWYIRGECDQSKLSRILDVAQDLKALSLLLNVQSFPFIIDLACLASRREYLKLDKWL
TDKIRDHGETFVTAMVKFLQRRCPQIIGKIPEDQLPKAAQLPPETVGTMLACLQLCIPNV
QQELQEAIYNLMASCQALILTKARPGIPGIARPHTRILETPFNPAGLGPQLFTPHVDAIA
NLAPNVANMTLGAPANTAFAMPGTLGPLVAAPGSPSRLLGAGPNSPFAMMPMQQHVANVA
NMGALARMPPTPMDKPRLPDPIHLPEMIHNVSKEIEDEANGYFQRIYNHPPHPTLSIDEV
LEMLKKFQDSPNKRERDVFSCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIEKGLVPSY
VSLGLALRFVLDALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFNEFPPHL
IEYIEYGLQSQEPPTKPQGAVLPTSLTAILNQTAVITVSAPYRAVICAPSAISVISKVSN
CIAGGIGSRPSIANATNIDTLLTATDREEKINAPPEAIQDKTAFIFNNLSQLNLQPKCEE
LKEIITEEYFPWLSQYLVMKRASIELNFHALYSNFLDVLKIREINRLVTKETYRNIRVLL
RSDKGIANFSDRSLLKNLGHWLGMLTLARNQPILYIDLDLKALLLEAYHKGQQELLYVVP
FVAKVLESCAKNVVFKPPNPWTMALMNVLAELHQEPDLKLNLKFEIEVLCKNLSLDIADL
KPSLYLKDPEKVRTIEFQLSQPKPVKETPNVMPVNQTLVPAPQIQLMPPQPQMIPVEDMS
AAAPTPTAGLVANDPNLMGVLGLPEPRFNYLDVNVSSTSAFGQKICFNPHIILFQNYPHL
KQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFSFDPDEVRMRTCAHHMMRNLT
AGMAMITCREQIISTISTNLKAAFITALIPTTPQQKDIIESAAAVLATENMELACAFIQK
TAVEKALPELDKRLMNDYEMRKIARQEGRRYYDPIVLTYQTERIPERVRLRVGGPTDLQI
SVYEEFACNIPGFMPVRDAGMFIPKPSAQEQVPQMTFNQVMNPQQVYGTDEMGTLISAAE
LFLSNALSVPSFAVQATNMHTLLECLIIARRNRDIVSGYTLLQRAVEGLLDGHIVQPGTN
PEHAEMMTRYRDIHLRVLKLLEDARVYGHAWTTKQITYCVSECRDELRYNLEAIDCLVRN
HLINMPQYDLALAHLMDNGNNYVAVAFAMQVVQLYLVDDRNNVYATESDLYHTTDTLVRM
MSHSRQPPPEGLATLIETIRINQDPSTYLGERSPLGPTAHIHNGILQVRARDYEDPPGLQ
EKTENLLREWRNVLLSPLTEIEIGQNFNIYVHRMNMNGILKSDDMITRFFRIATQMCVEN
VYQLLNEDRMNPPPVPPKRDKYYAMCDSFIKLVSLLIKNTADGGNPTPKLNLLNKILGII
AGCLLQDHEEHGSNFQQLPYHRLLLILFLDMNMAEPVLESMNYQVLTAFCHTLRIIRPSV
APGFCYAWLEIVAHRAFVNRVLAVTPQQKGWGMYSTLLIDLFKFLDPFLRNTELATPVMM
LYKGTLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFPRNMRLPDPFTPNL
KVDLLAEITLPPRAVINYANIIPASQFKKDLDAYIKARAPVTFLSELRSNMQVVNEPGRR
YNSQLMNAVVLYVGTQAIAYIRAKGQTPNMSTIAHSAHMDIFQNFTVDFDYEGRYLFLNA
IANQLRYPNSHTHYFSCCLLYLFAEANTEAVQEQITRMLLERLIVNRPHPWGLLITFIEL
IKNPIYKFWTHEFVHCAPEIEKLFASVARSCIADKAGGERDMTE
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggaccctctaacgtttagtttatcacaaataaattatcttgttgtaaattta
aataagaagaactttaaacagacaagtcaagagttgtcccagattgtcagtctctatggc
ttggaagcagagaatcaactgctgaggtgtctgctcagtgaggcggctaaaacgtgggac
gagcgtacggcatccagcgtgcatgcgtcactcctcgcccagcacttggcctgtctactc
aaccaccccgcaaagtctacggtgatctgccaagctgttgatcaacccacacgctcactg
caaaaggttttaaaaccaacgaattcactacttagtcgactagcaaggttgctgaaattt
acgacagcccaagatgttgccttcacattggtgctgagaagaaattcttcgaaacctgac
attgtttctcttgccaaacagcatttaaagaaaagatttttggactttgtccagtgttat
cttgacgcagagcgtggtcatcaagttgagagagcgggacttcaggaatgcagccctgaa
gttttgcaaactcttctaaccagtctcgcctacgagaacttccggcttgcagccgtcacg
aaggatttgtttttgaaacgtctgcgtatagactttccccgcgaggttgttcctattgta
cttgcgcccctgctgtaccccgacgacacacaaactcctttggaggagatgacaacgtct
gatgatatgacagcagcaatgatggataatactttagcggaaatcattcgagacatcggc
tatgccttcacggcttccgtcgaagactgtaaaaataatatggtcaattttggtgccagg
gagcccacagcaattgacgttgccagaatcatatctactatgatcaagtatcatgcaact
atacaagaagctccacatgtccaaactccagggaatttctggatgaatcatgaggctaaa
aaggaggccatggcccatgggcacgtcggagaaacgtggaacccagaggtatttgtccag
acactcaaagaacttgcttcaaatttaaattggaaagaagtcattctacaattagatcat
ccagaattcattgttcccgacagacagggtttgagcctactatttactattttgcgccta
ggtctccagagcgctggatatcctgcaaatatattccccgttgaatacctttgtcgtcgt
tgggcgaatttggaaggtcaaatgagtttattaacgaacatactcaaacatccggatata
ttcagctttgccgatcatcctttccatccagtatcgatagatctgctgaaatcgccaccg
gaaacagataacaaagaagtatctacttggcgatgtctatatttggtagagctattatta
tatgcttcagaacgcggctattatctgcaagtacacgagctatttaaatatccactacag
cactgtcctgacatactattgttggcgttgttacaaattagtccacctataacggtgttt
agacaagaattattaacaacactcattcctatatttttgggcaaccatccaaactcgggc
atagttttacaacatgcatggcattcacaaaatcccaatatcaagcccataatcatgcac
gcaatggcagattggtacatacgaggagaatgtgatcagtcgaagctatcaagaatattg
gacgttgcgcaggaccttaaggctctatccttattgttgaacgtccaatcttttccattt
ataatcgatctagcttgcctagcatcgcgtagagagtacctcaaacttgacaagtggcta
acagacaaaatacgtgatcatggagagacatttgttacagccatggttaaatttctgcaa
cgacgatgtccccaaataattgggaaaataccggaagaccaattgcccaaagcggcacag
ttaccgccggagactgtgggcacaatgttggcctgtctacagttgtgtatccccaatgtt
cagcaagaattacaggaggcgatatacaacttaatggctagctgtcaagccttaattctt
actaaagctagaccgggtatacccggtattgcaagacctcatacacggattttagaaact
ccattcaatcctgctggcttgggccctcagctttttactccccatgttgacgctattgca
aatttagcaccgaatgtcgccaatatgacattgggagcaccggcaaatacagcttttgca
atgccaggtactctcggaccattagtcgcagctccaggatcaccatctcgtctcctagga
gctggacctaatagtccctttgctatgatgcccatgcagcaacatgtcgccaatgtggca
aatatgggagcattagcccgaatgcctccaacacctatggacaagccacgattgccagat
cctatacatttaccagaaatgattcacaatgtgtccaaagaaatagaagacgaagccaat
ggttattttcaaaggatttacaatcatcctcctcatcctacattatcaatagatgaggta
ctagaaatgcttaagaaattccaagattcgcccaacaaaagggaacgtgatgtgttctct
tgtatgctccggaacctattcgaagagtataaatttttcccacaataccccgataaagag
ttgcatattacagcgcagttattcggtggtatcattgagaagggattagttcctagttat
gtgtcactagggctggctctaagattcgtcctagatgctttacgaaagccggagggctct
aaaatgtattactttggcatagcggctttagatagatttaagtcgcgattaaaagattac
cataaatattgcgaacacgtaagagccataccgcattttaatgagttccctccacactta
atcgaatacattgagtacggtctccagagccaagagccgcccactaaaccacagggggca
gttttacctacgagtctaaccgccatcttgaatcagaccgccgttataacagtttcagca
ccttacagggcagtaatttgcgctcccagtgccatctctgtcatctcgaaagtgtcaaat
tgtattgcgggcggtataggaagtcggccgtcaatagccaacgccaccaacattgataca
ctactgactgctaccgacagggaagagaagataaacgcaccaccagaggctattcaagat
aaaactgctttcatattcaataatcttagtcaattgaacttacaacccaaatgtgaagag
ttaaaagaaattataacagaagaatatttcccatggctatcacagtacctagtgatgaaa
agggcgtccatagaactaaatttccacgctctgtactcaaatttcctagacgtcctaaaa
attcgtgaaataaacaggttagttactaaagaaacttatcggaacatcagagtattgttg
cgatctgataaaggcatagctaacttttctgatcgatcgttactcaaaaacctcggccat
tggttaggcatgctcaccttagctcgcaatcaaccgatcctctacatcgacctcgacctc
aaagcactcttacttgaagcttatcacaaaggccagcaggagctgttatatgtcgtgccg
tttgttgcgaaggtcttggaatcctgcgccaagaacgtcgtatttaaaccgccgaaccct
tggacaatggccctaatgaacgtattggctgaattacatcaagaaccagacttaaaatta
aatctgaagtttgaaatagaagtgctttgtaaaaacttgagtttagacatagccgatctt
aagccatctctgtacctgaaggacccagagaaagtgaggacgatagagttccagctctca
caaccgaaaccggtcaaagaaacccccaacgtgatgccagtgaatcagacattagttccg
gcaccacaaatacaattgatgccaccacagcctcagatgatacccgtcgaagatatgtca
gctgccgcgcccacgcccaccgctgggctggtcgccaatgatccaaacctcatgggcgtc
ctaggtttgccagagccacggttcaactacctcgacgtcaacgtctcatccacctcggcc
ttcggacagaaaatatgtttcaatccgcatatcattctgttccaaaactacccacacttg
aaacaatttgtgaaacctgctatagaaaggtcgattcaagaatggatacatccagtcgtc
gataggtccatcaagtacgctctgacgacttgtgagcagataataaggaaagacttctcc
ttcgaccccgacgaagtacgtatgcgcacttgcgctcatcacatgatgaggaatttaacg
gccggcatggctatgataacctgtcgggagcagatcatcagcaccattagcacaaacctt
aaggcggcgttcatcacggctttgataccgaccacgccgcaacagaaggatatcatagag
agtgccgcagcggtgcttgctactgagaacatggaacttgcttgtgctttcatccagaag
acagccgttgagaaggcgctcccggaactcgacaaacgactgatgaacgattacgaaatg
cgtaaaattgctcggcaagagggcaggagatactacgatcccattgtcttgacgtatcag
acagagaggataccggaacgagtccgcctacgcgtcggaggtccaacggacttgcagatc
tctgtctacgaggagttcgcgtgcaacattccaggattcatgcctgtgagagacgctgga
atgttcataccgaaaccgtccgcccaagaacaagtaccacagatgacgtttaatcaagta
atgaatccgcaacaggtatatggaacggatgagatgggtacactgatatcagctgcggag
ttgttcctcagcaacgccctgtctgttccctcgttcgcggtgcaagcgacaaacatgcat
actttactcgaatgcctcatcatcgccagacggaatcgtgatatcgtttcgggctacact
ctcctacaacgagctgttgagggtctcctagatggtcacattgtacagccgggcacgaac
ccagaacacgctgaaatgatgacccgttatcgtgatatccacctgcgagtactgaagctg
ttagaagacgcgagggtgtacggccacgcgtggacaactaaacagatcacatactgcgta
tccgaatgtagggatgaactgagatacaacctggaagctatcgactgtctcgtaaggaac
cacctgatcaacatgccacagtacgatcttgcgttggcacatttgatggacaacggcaac
aactacgtcgccgtggctttcgcgatgcaagtggttcagttataccttgtggatgacagg
aacaacgtgtacgcaacggaatcagacctctaccacactactgacaccctcgttaggatg
atgtcacactcgcggcagccgccgccagagggtcttgccacattgattgaaactatccgc
atcaaccaggaccccagcacatatcttggtgaacgttcacctcttggacccaccgctcac
attcacaatggcattttgcaagtgcgggcccgcgactacgaggatccacccggtctccaa
gagaagacggaaaatctgctccgcgaatggaggaacgtgctcctcagtccactcactgaa
atagagatcggacagaacttcaatatatacgtgcacaggatgaacatgaatggtatactg
aaatctgatgacatgatcacacgtttcttccgcatagccactcagatgtgcgtcgagaat
gtataccagctgttgaacgaggacaggatgaatcctccccccgtgccgcccaagagggac
aagtattacgctatgtgcgactcattcatcaagcttgtgtcgctgctgattaagaatacg
gctgacggaggaaatccaacaccgaaattgaacttattgaacaagatcctgggtataatc
gcgggctgtctgctgcaagaccacgaggagcacggctcgaatttccagcagctgccgtac
caccgtctcctgctgatactgttcctagacatgaacatggccgaacccgtccttgaatct
atgaactaccaggttctaacagcattctgccacaccctccgcatcatacgcccgagtgta
gctccagggttttgttacgcgtggcttgaaatagtcgcccaccgagcattcgtgaatcgt
gttctggctgtgacgccgcaacagaagggttgggggatgtattcgacgctgcttatcgac
cttttcaagttcctcgatccgttcttacgtaacacggagctggcgacgccagtcatgatg
ctgtacaagggaacacttaaagtgttgctagtattgctccacgactttcccgagtttttg
tgtgactatcactatggcttttgcgatgagatcccaccgaattgcatacagatgaggaat
ctcattctgtccgcgttcccgaggaacatgcgtctgccggatccattcacacccaacttg
aaggtggatctgttggccgagatcactctaccaccgcgtgccgttatcaactacgccaat
ataataccggcgtcgcagttcaaaaaggatctggacgcgtatatcaaggccagggctccg
gttacattcctatcggaactgcgcagtaacatgcaggtggtgaacgagccaggtcgcagg
tacaacagccagctgatgaacgcggtggtgctttacgtcgggacgcaggcgatcgcttac
atccgtgccaaagggcagacgccgaacatgtcgacgatagcacattcagctcacatggat
atattccagaatttcaccgtagactttgactatgagggccggtatctattcttgaacgct
atcgcgaatcagctccgttatccgaacagtcacacgcactacttcagttgctgcctgctg
tatctgttcgccgaggctaacacggaggctgttcaggaacagataacgaggatgctccta
gaaaggttgatagtaaaccgaccacatccctgggggctcctcatcacattcatcgaactc
atcaaaaatcctatatataagttctggacacacgaattcgtacattgcgcgcccgagatc
gaaaagttgttcgcgtcggtcgcccgctcgtgcatcgcggacaaggctgggggggaaagg
gatatgaccgagtag
DBGET
integrated database retrieval system
