Drosophila pseudoobscura: 4803356
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Entry
4803356 CDS
T01032
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4803356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpo03400
]
4803356
DNA repair and recombination proteins [BR:
dpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
4803356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
4803356
NCBI-ProteinID:
XP_001360110
UniProt:
A0A6I8USU9
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Position
3:4202412..4208341
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AA seq
1247 aa
AA seq
DB search
MSDEEEDSVSEGFSASEDEWKPNKDARGGESSDDDDSEFDEMQAAGAAGAAGPSGRSSAG
ASKKRDQKPPSGIKGASVKKRKPSGQSLRSKLYNKYRPPPKTFQTSPSQQNSPSASGSKN
ARTPNESGSQDRQYADSSSESSVEDYLVNPADLDLRSSFFSAQPPSKDKSPAPQFDCNAG
VKILSDSGSEDNNDSSVEDKATNAFDFRGLLENANSLERTRDALARRAVTAASPKNRAAT
MDVNALLALGENPNQNYAKAIESDKDEVKEERAGRRAAAEAPPPPLDGPPRLSKTKSTRI
KRHTKTRPVSTVVAAAQDTDDSDFEEVADAELGSDEDGAATPNISGDLEIHIGLQSGHVT
KEQKSQHELEMALKRRLNRDIKDRYQLQHKVSLLAQMTRSMLYNRLLGDSELMNGALKLL
PSRNAYPTERGTELKYLQSFVTWFKTAIKLLSPHLYPERTAGTKQGIVKELLTQISRKEA
RCKQDMIFIFIVLARGMGMHCRLIVNLQPMPLRPAASDLIPIKLKSNEANRNRSQTVDSD
DKSDSGGETTERKGAAKAKPAGVSSVMNTSKPKLGSPTEPKGPNPSSRRLKSVKKESGAA
KPAKKEAEDIKPGCSPIAKSRIVKKEPERALKSDVVASPPKSGLKAHSKSEKCVFEEKPS
TSKAARPQLSALKRASTVTGMAAADESKKSRLAPDNSFSPVAGRTRKAAERPIPAALQKN
RVGSPQKVGSPVIPKLVFSKAKLQNAKHSDAENANPTEKHQPQHKQQLGTRETRSRSKSP
KVHISPTFLTVKSGAARADSTPSQALTKSQEAEAGAGARTASGRQLRTRQPKIGKQAIPQ
LDGADDLPVAKKRLKLEKLQRSPDSDEVFEPARPVKKAPVLPKAVEKLRKDRRVLSTDDE
SGSKGKPRPDASDMWVEVWSEVEEQWICIDLVKLKLHCVDTIRKNASPGLAYVFAFQDDL
SLKDVTARYCANWSSVVRKARVEKGWIDETIAPYLGRRTKRDICEDEQLRRIHSEKPLPK
SIAEFKDHPLYVLERHLLKFQGLYPADAPTLGFIRGEAVYSRDCVHLLHSREIWLKSARV
VKLGEQPYKIVKARPKWDKLTRSVIKDQPLEIFGYWQTQDYEPPTAENGIVPRNAYGNVE
LFKACMLPKKTVHLRLPGLMRVCKKLNIDCANAVIGFDFHQGACHPMLDGFVVCEEFREV
VCAAWEEDQQEQARKEQEKYETRVFGNWKKLIKGLIIRERLKRKYNF
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaagaagaagactcggtgtccgagggcttctctgccagcgaagatgagtgg
aagcccaacaaagatgctcgtggaggcgaatcatcggacgacgacgatagcgaatttgat
gagatgcaagcagcaggggcggctggtgctgcagggcctagtggccgatcatctgcgggc
gcatcaaaaaagagggatcagaaaccgccgagcggcataaagggagcttcagtaaagaag
cgcaagccaagtgggcaatctctgcgctcaaagctgtacaacaagtaccggccgccgccc
aaaacgtttcaaacttcaccctctcagcagaactcgccatcagcgtcgggttcaaaaaac
gcaagaacgcccaatgaaagcggttcacaggatcggcagtatgctgattccagcagtgaa
tccagcgtggaggactatttggtgaatcctgccgacctcgatctgcgctcgagcttcttt
tcggctcagccaccgtcaaaggataaatcgccagcgccgcaattcgattgcaatgcaggt
gttaaaattctctccgactccggttccgaggataacaacgacagcagcgtcgaggacaaa
gcgaccaatgcgtttgacttccgcgggctcctagagaatgccaacagtctggagcgcacc
agggatgcactggccagacgcgccgtcacagccgcatcgccgaaaaaccgcgccgcaaca
atggatgtcaatgcactgcttgcattgggcgaaaatccaaatcagaactacgccaaggct
atcgaatctgataaggacgaggtgaaggaggagcgagcagggcgacgagctgcagcagag
gccccgccgcctcccttggacggaccgcctcgtctaagcaagaccaagtcgacgcgcata
aagcggcacaccaagacgcggcccgtgtccactgtggtggctgctgctcaagacacagac
gactccgattttgaggaagtggcagacgcggaacttggcagcgacgaggatggtgccgcc
actccgaacatctctggcgatctggaaatccacatcggcctgcagtccggccacgttacc
aaggagcagaagagccagcacgaactggagatggcgctcaagcgtcggctcaaccgcgac
attaaggatcgatatcagctgcagcacaaggtcagtctgctggcccaaatgacgcgcagc
atgctgtacaatcgcctgctgggcgactccgagctaatgaacggggcattgaagctgctg
cccagcaggaatgcctatcccacggagcggggcaccgagctgaagtatctgcaatccttt
gtcacctggttcaaaactgccatcaaactactgagcccccacttgtatcccgagcgaacg
gctggtaccaagcagggcattgtcaaagagctgctcacgcaaatttcgcgtaaggaagct
cgctgcaagcaggatatgatcttcatatttattgttcttgcgcgaggtatgggcatgcac
tgccggctgatcgtcaatctacagccaatgccgttgcggccggcagccagtgacctaatt
cccatcaagctgaagtcgaatgaagcgaataggaatcgaagtcagacggtcgactccgat
gataagagcgactccggtggcgaaacgacggagcgcaaaggtgctgccaaggccaagccc
gcgggggtgagcagtgtaatgaacactagcaagccaaagctgggctccccaacagaacct
aaaggaccgaatcccagttcacgcagattaaaaagtgtcaagaaggagagcggtgcagct
aagccggccaaaaaagaggctgaagacataaagccgggctgtagtcccatcgcaaagtcc
aggatagtcaagaaggaaccagagcgggcactgaaatctgacgtggtcgcaagccctcct
aaaagtggtcttaaagcgcactcaaagtccgaaaaatgtgtcttcgaggaaaaaccaagt
acttcgaaagcagccaggccgcagttgtctgcgctaaagcgtgccagtacggttacagga
atggcggccgcggacgagagtaagaaatccaggttggctcctgacaattcgttctcccca
gtagcaggacgtacgcgcaaagcagctgaaaggccaatacctgcagctctgcaaaagaac
agagtggggtccccgcagaaggtcggatcccccgtcattcctaaactggtcttttcaaaa
gccaaactgcagaatgccaagcacagtgatgccgagaacgcaaatcccacagagaagcat
cagccgcagcataagcagcagctaggtacgcgagaaacacggtcgcgtagcaagtcgcca
aaggtccacatctcacccacttttttaacggttaaatctggcgcagcaagagcagatagc
actccgagccaggcgcttaccaagagccaagaggctgaggctggggctggggccagaacg
gcttctggacggcagcttcggactcgacagccgaagatcggaaaacaggccataccgcag
ttagatggcgccgacgacctgccagtggccaagaagcgtctgaagttggagaagctacag
aggtcgcccgactccgacgaagtatttgagccagccaggccagtgaagaaagcgccggtt
ctgcccaaggcagtggaaaagttgcgcaaggacaggcgagtcttgtccacagacgatgag
agcggctcaaaaggcaagcccaggcctgacgcatccgacatgtgggttgaggtctggtcc
gaggtggaggagcagtggatctgcattgacttggtgaagctaaagttgcactgcgtagac
accatcaggaaaaatgcatctccaggcctggcctacgtatttgctttccaggatgatctg
agtctaaaggatgtgaccgctcgctactgcgccaattggagctccgtcgttcgaaaggca
cgcgttgaaaagggctggatcgatgaaaccatcgctccgtatctgggtcgtcgcaccaaa
agggacatctgcgaggatgagcagctgcggcgcatacactcggagaagccccttcccaag
tccatagccgaattcaaagatcatccgctgtatgttctcgaacggcaccttctgaagttt
cagggcctctatccggcagatgcgccgactcttggctttatacgtggggaagctgtctat
tccagagattgtgtgcatcttctccactcccgggaaatctggctcaagagcgcccgcgtc
gtgaagctgggtgagcagccctacaagattgtcaaggcgcgtcctaagtgggataagctc
acgcgctctgttattaaagaccagccacttgagatattcggctactggcaaacacaggac
tacgaacctcccaccgcggagaacggcattgtgccgcgcaatgcctacggcaatgtggag
ctattcaaggcctgcatgcttcccaagaaaacggtgcacctgaggctgcccggactgatg
cgcgtttgcaagaagctgaacattgattgtgccaatgcagtgatcggctttgacttccac
cagggcgcttgccaccccatgctagatggcttcgttgtctgcgaagagttccgcgaagtg
gtctgtgcggcttgggaagaagatcagcaggagcaggcgcgcaaagagcaggagaagtac
gagacccgagtctttggcaattggaagaagctcatcaagggtctgattatacgcgagcgt
ctcaagaggaagtataatttctaa
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