Drosophila pseudoobscura: 4804763
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Entry
4804763 CDS
T01032
Name
(RefSeq) nucleoporin NUP188 homolog isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
dpo
Drosophila pseudoobscura
Pathway
dpo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4804763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpo03019
]
4804763
Messenger RNA biogenesis [BR:
dpo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
4804763
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
4804763
NCBI-ProteinID:
XP_001361274
UniProt:
A0A6I8UV41
LinkDB
All DBs
Position
3:14872954..14879187
Genome browser
AA seq
1881 aa
AA seq
DB search
MPIVEKYVIKDWKRLWQMVSGIHHETPRDIVREELMSVCSELQAGVLQFKPKSASDVQLE
ALLRDKKQEKLLSFTERLQDLLNIESAQCWEILCYYLTQEYRGSASLLTQLISTETSMAK
LLADIVHYYSLERMIVLKIVKNLLVFYSVPNHPYHKEYREVVDKITLSRLRDSYFDQLES
LIDEEPPRKLTAGECFYSTDSLKAWSERNSRETKEVLHILLLMTEHLPMGLEQIKRLFSV
FKQHSFGRTHKSLNEGNVFHQELRRSLIYSEMALLLRCLDFEEPRENCDIIEKLVGCLDV
DITSMYHRQEHGPLLLSWMLMRLRGTNDADDASSLLRCRHIGKRAVDLKCFVELHSIVTH
PMFSDDSLLSRIVRKTVYNQVGYLCDLFDGDGSCARYEGIYTLLYELLSWPQLAKDFCTR
EDTGARSLYTTLLENFPLDFTNLAKLGQALTKGGQRNYIKKQLESLPILALMYDERVHKL
NEVDTDEFELTAGVSPYPGIDFNIPVGTSCAAVQHPSGCYMHFRTQVNFFDALHHEMNCL
LKETGHLHGDFESNDRIRRVEAGLKFLECAVQHTQSVEGISAEMVHPTEMCIDLLNKFKT
VQCPPVGLLSACLNVCTALLPLVDEEIFTRVSNLGILPSISDRSVEDYKLYAAGSAACFQ
ARFLGCIIDNVEKKLERYDFLLSYLAFLRTYTKLKRNRYMQVELPGLIFVLRDVFPHVHA
WHFRSHQDKNKIYFEIFSYICDILDLISTGSTPRSEDRELLLKVCIYSLLNLENGMILLR
FVGVGNSYLQNSMELETNWMQQQPHGLTMLVRLSMRILMQLLRLKGSVYGGHESLSPLEA
LIYTQPKQRDTLRIIPTVCSYMSNIFDRWLPILSCRLLKRIALEFNMSLLACLDMEPDQI
RLTFIQKLPDELESDSIKIAILELVDACIAKQPGVTEAFFKVNYGQDKCSRSFFGKECQP
TIGESIVTYMKEFLDALEQEPLTIQQALPRKIMNIFHSLWKHNLQMLVNDLLKESKFWQR
LCSPLLCQFEPNIRVYTQILNIVSIEVYTCNGENAALKDVLTKFFEIKHFGEWLNYVFDI
PKAPAVANSSSDELPDWICCLQSFKDLIIIMLKKQPKLMSIPEPQFKLMAKKCLAVLVDR
SHYLEDMRPFIMLAELYVFILLKLNHSYTNSDKEDRELMEHLLQLMSRICSCYEDLHVRA
KEACLAIIIKSAHLYTSLLIHDSAISLSFLNSVVSIICTELQSMENSVNLDRRQSVENTD
STDSTTNSLILCLNLLKTVATIFNSEGPGNWDLPFVSVRLFQRLLRCIAHTLPLHNKQVL
TVHLLDVLIVFAKSHCSVEFLHCDIGEYLWLSLQPPPELVQAKYEFNKPKADADRWTPEH
WWPVYARGIELVNIIYEKHKGCFLKNALQFVDIHEVYLVDAMLLSKQSLEPAAMQLIKAV
VSLVASLTEHHMEWAQQNKTSLMNIMRAMQTLLCHVSTLFHQQRNLKCLLAGRHCQLEIL
RSTAAIVIDDDLIAACNDLTDIIIYCTKSLLEFSPDLMELICSSVYEPSKWSPLLDVKFG
APKMSEQNITLTFTMILNMVSIYVKALNMQNHGFSEVPLNTLPNVSQDGDGGEVADNESA
SLLQTNRTFSKTISSTSIVSVSCPASELLSNMDSQLCLLALEHLLMFVASQGIYIIRSTN
LEPRWKQIVRRDINSDLLCFHEFVRRKVIADNRDSRSPWLRRKHGLFKLNFLDPTRSSSS
PSSRSTDVVRRTNTAPTNELRVNVVRRLHLQQQHRTPAAGTNNFDMTRDLSPIGAEHGPP
AAQHMATSSTPRSNDPAGDLGSRKRLYPGDNYVLDDLAAIEVQYFPPPMEPGFCEQSQVQ
LVEEDYLKLMSLLFVVIPSSE
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgcccattgtggaaaagtatgtcatcaaagactggaagcgcctttggcaaatggtgtcc
ggcatccaccatgaaactccccgggacatagtgcgggaggagctgatgagtgtgtgcagt
gaactgcaggccggcgtgctgcagttcaagccgaagagtgcatcagatgtccagctggaa
gcacttttgagggataagaagcaggagaaactgctgtcgttcacagagcggttacaagac
ttgctcaacatcgagtcggcacaatgctgggagatattgtgttactatctcacgcaagag
taccgcggctccgccagtctgctgacccagctgatttccacagagacgtctatggccaag
ctgctggcggatatagtacactactactcgctggaacgcatgattgtgctgaagattgtg
aagaacctgctcgttttctacagtgtgcccaaccacccctaccacaaggagtaccgcgaa
gtagtggataagataacgctgagtcgcctgcgggactcgtacttcgatcagctggagagt
ctgatcgatgaggagccaccgcgaaagctgacggcaggcgaatgcttttactccaccgac
agtctgaaggcctggtccgagcgcaattctcgcgagaccaaagaagtgctgcacatcctc
ctactgatgaccgagcacttgccgatggggctggaacagatcaaaaggctcttttcggtt
ttcaagcagcactcttttggtcgcacgcacaaaagcctgaacgagggtaatgtcttccat
caggaattgaggcgcagtctcatctactcggagatggcgctgcttctaaggtgtttggac
ttcgaggagccccgcgaaaactgcgatatcattgagaaactagtcggttgccttgatgta
gatataaccagcatgtaccatcgccaggagcatggacccttgcttctgtcttggatgtta
atgcgtttgagaggcaccaacgatgccgatgatgcatccagtttgcttcgttgccgacac
attggcaagcgcgccgtggatcttaaatgttttgtcgagctccattcgattgtcacacat
ccgatgttctcggatgacagtcttctgtcacgaattgtacgcaagaccgtctacaaccag
gtggggtacttgtgcgacctcttcgacggtgatggcagctgtgcccgctacgagggaatt
tacacgctgctatacgagcttttgtcgtggccgcagctggccaaggatttctgcactcgt
gaagatactggggcgcgctcgctctacacaactttgttggagaactttcccctggacttt
acgaatctggccaagctgggacaggcgctaaccaaagggggacaacggaactatatcaag
aaacagctggagtccttgcccatactggcgctcatgtacgacgagagggtgcacaaactg
aatgaagtggacacggatgagtttgaattgacggccggcgttagtccctatccgggcata
gactttaacatccccgtgggcaccagctgcgcggccgtacaacatccgtccggctgctac
atgcatttccgcactcaagtaaactttttcgatgccctgcaccacgagatgaactgcctg
ctgaaagagacgggccatctgcacggcgactttgagagcaacgaccgcattcgtcgcgtg
gaggccggcctgaaattcctggagtgcgcagtgcagcacacccaatcggttgagggcatc
agtgccgagatggtgcatcccaccgagatgtgcattgatcttctgaacaaattcaagacc
gtgcagtgccccccagtgggactattgtccgcatgcctcaacgtttgtacagcgctgctg
ccgctagtggatgaagagatattcacgcgcgtaagcaacctgggcatcctgcccagcatt
tctgatagatctgtggaagactacaagctctatgctgccggcagtgccgcctgcttccag
gcgcgctttcttggctgcatcatagacaatgtggagaagaaactcgagcgctacgacttc
ctgctctcctacctggcctttctgcgcacatatacgaagctcaagcgcaatcgctacatg
caggtggagctccctggcctgatcttcgtgctgcgcgatgtctttccccacgtgcatgcc
tggcacttccggtcacatcaagacaagaacaagatatacttcgagattttcagctacatc
tgcgacattctcgacctaatcagcaccggcagtactccgaggagcgaggaccgcgagctc
ctcctcaaagtgtgcatctattcactgctgaatctcgagaacggcatgattctcctcagg
tttgtgggcgtaggcaactcctatttgcagaactccatggaactggaaacgaactggatg
cagcagcagccgcacggcctgacgatgctagtgcgtctctccatgcgcattctaatgcag
ttgttgcgactgaagggttcggtgtatggcggccacgaatcgctctccccgctagaagcc
ttgatatacacccagcccaagcagagggacacgttgcgtatcattccgactgtgtgtagt
tatatgagtaacattttcgacagatggctgcccatcctgtcgtgtcgtctgctgaagcgc
attgccttggagtttaacatgtcgctgctggcttgtctcgacatggagcccgaccagatc
aggctgacctttatacagaagctgccggacgagctggagagcgattcgatcaaaatagcc
attctggagctggtggatgcctgcattgcaaagcagccgggcgtgaccgaggcatttttc
aaagtcaactacggccaggacaagtgctcgcgctcgtttttcggcaaggagtgtcagccg
accattggcgagagcattgtcacgtacatgaaggagttcctcgatgcactcgagcaggag
ccactcaccatacaacaggcgctccccagaaagatcatgaacatcttccactcactgtgg
aagcacaacctccagatgctggtcaatgatttgctgaaggagtcgaaattctggcaaagg
ctctgctcgccgctgctctgccaattcgagccgaatatccgcgtctacacccagatcctc
aacattgtgtccatcgaagtctacacgtgcaacggagagaatgccgctctcaaagacgtg
ctgaccaagttctttgagatcaaacacttcggagagtggctcaactatgtattcgacata
cccaaggctcccgccgttgccaactcgagctccgatgagctgcctgattggatttgctgc
ctgcagtcgttcaaggatctgattatcataatgctgaaaaagcagccaaagctcatgagc
atcccggagccacaattcaagctgatggccaaaaagtgcctggccgtgttggtcgatcgt
tcgcactatctggaggacatgcgtccgtttataatgctcgcagagctgtatgtcttcatt
cttctgaagctgaaccactcgtacacgaacagtgacaaggaggaccgggagctgatggag
catttgctgcagctgatgagccgcatctgctcctgctatgaagacctgcacgtgcgtgcc
aaggaggcctgtctggccatcatcattaagagcgcccatctctacacgagtctgctcatc
cacgattcggccatatccctgagtttcctcaactctgtggtcagcatcatctgtaccgag
ttgcaaagcatggagaactcggtcaatctggacaggaggcagtcggtggaaaatacggac
agcaccgacagcaccaccaactctttgattctgtgcctcaatctgctcaagaccgtggcc
actatattcaacagcgaaggacccggaaactgggacctgccctttgtgtccgtccggcta
tttcaacgccttctgcgctgcatcgcccacactctgccgctgcacaacaaacaagtgctc
accgtccacctgctggacgtcctcatagtgttcgcgaagagccactgctccgtggagttt
ctgcactgcgatatcggcgaatacttgtggcttagccttcagccgccgcccgaactcgtc
caggccaaatacgagttcaacaagcccaaggctgatgcggatcgctggaccccggagcat
tggtggcccgtttatgcccggggcattgagctcgtaaacatcatctacgaaaaacataag
ggttgcttcctgaaaaatgcccttcaatttgtggacatacacgaggtctatctggtggac
gccatgctgctgagcaagcagtcgctggagccggctgccatgcagctgatcaaggccgtc
gtttcactggtggccagcctgacggagcaccacatggaatgggcgcagcaaaacaaaacg
tcccttatgaatataatgcgtgcgatgcaaaccctgctgtgccacgtatccacgctgttc
caccaacagcgcaatctgaagtgtctcctggcagggagacactgccaactggagatccta
cgcagcaccgcggctattgtaattgatgatgacctcattgccgcctgtaacgaccttaca
gacatcatcatctactgtacaaagtcgctgctcgaatttagccccgatttgatggaacta
atctgctccagtgtctacgagccgagcaaatggtcaccgctactcgacgtgaagttcgga
gctcctaagatgagcgaacaaaatataacgctaacctttaccatgatcctgaatatggtc
agcatttacgtgaaggccctgaatatgcaaaatcatggcttcagcgaggtgcccctcaac
accctgcccaatgtcagccaggatggggatggtggggaggttgcagacaacgaaagcgca
tcactactccagaccaaccgaaccttctccaagacaatatcgagcacctcgattgtatcc
gtcagttgtcccgccagcgagctgctctcgaacatggatagccaactgtgcctgctggca
ctggagcacttgctcatgttcgtggcgtcgcagggcatttacataattcggtccacaaat
ctggagccgcgctggaaacagattgtgcggcgagacatcaatagcgatcttctctgcttc
catgagttcgtgcgtcgcaaggtgatcgcagacaatcgcgactcccgttccccctggctg
cgccgcaagcacgggctattcaagctaaattttctggatccgactcggagctccagctcc
cccagcagccgcagcaccgatgtagtccgtcgcaccaacaccgcccctaccaacgagctg
cgggtgaatgtagtgcgacggctgcatctacagcagcagcatcgcactccggctgctggc
acgaataactttgacatgacgcgcgacctaagcccaataggagcggagcacggtccgccc
gccgcccagcacatggccacctcgtccacaccccgctccaatgatccggcaggtgacttg
ggcagcagaaagcgcctgtatccgggtgacaactacgtgttggatgatcttgccgctata
gaagtgcagtactttccccctccgatggagcccggcttctgtgagcagtcccaggtgcag
ctggttgaggaggactacctcaagctgatgtcgctgctcttcgttgtgataccgagcagt
gaatga
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