Drosophila pseudoobscura: 4814623
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Entry
4814623 CDS
T01032
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
dpo
Drosophila pseudoobscura
Brite
KEGG Orthology (KO) [BR:
dpo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpo04040
]
4814623
Ion channels [BR:
dpo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
4814623
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
4814623
NCBI-ProteinID:
XP_033241007
UniProt:
A0A6I8WEL9
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Position
X:complement(15180603..15252555)
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AA seq
2163 aa
AA seq
DB search
MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQK
EIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNILTFVVVSK
GKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVES
TEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALR
TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQK
CIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDDGISFPLCGNISGAGQCEDDYVCLQGF
GPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYL
VNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANAQAQAAADAAA
AEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPAP
TTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTY
QDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGG
MAVMGVSTMTKESKLRNRNTRNQSVGATNGATTCLDPNHKVEHRDFEIGLECTDEAGKIK
HHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTF
KDKALEALMKGIEVFCVWDCCWAWLKLQEWISLIVFDPFVELFITLCIVVNTMFMAMDHH
DMNKEMERILKSGNYFFTATFAIEATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLE
GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQ
LFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFF
LATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIAD
CFKLIRNKLTNQISDQPSGERTNQISWIWSEEHGDNELELGHDEILADGLIKKGIKEATQ
LEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDD
TASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGELEEGPLDGD
IIIHATDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFET
AVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTN
AWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQ
AIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTW
VNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFII
FGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPR
WRPQAIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSE
CLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVL
RLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNF
KTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLV
ISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEF
LDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGE
IAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKTRAEGGGAPSDAEGGPEDGDGGG
DAGDLDDPDAAADAAPTGPHDGAAALDPENDPSGAAAAPQPAGDGGEGPEGGATADPHES
NVNSPTMDGAAATAAGSPGAGSAGSTGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRT
ADV
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagattccgactcgatatctgaggaagaacgcagtttgttccgtccctttacc
cgcgaatcattggtgcaaatcgaacaacgcattgccgctgaacatgaaaagcagaaggag
ctggaaagaaagagagccgagggagaggtgccgcaatatggtcgcaagaaaaaacaaaaa
gaaatccgatatgatgacgaggacgaggatgaaggtccacaaccggatcctacacttgaa
cagggtgtgccaatacctgttcgactgcagggcagcttccctccggaattggcctccact
cctctcgaggatatcgatcccttctacagcaatatactgacattcgtagttgtaagcaaa
ggaaaagatatttttcgcttttctgcatcaaaagcaatgtggctgctcgatccattcaat
ccgatacgtcgtgtggccatttacattttagtgcatccattattttcgttattcatcatt
accacaattctcgtcaactgcatcctgatgataatgccgacaacgcccacggttgagtcc
actgaggtgatattcaccggaatctacacatttgaatcagctgttaaagtgatggcacga
ggtttcattttatgcccgtttacgtatcttagagatgcatggaattggctggacttcgta
gtaatagctttagcttatgtgaccatgggtatagatttaggtaatcttgcagccttgcga
acgtttagggtgctgcgagcgcttaaaaccgtagccattgtgccaggcttgaaaaccatt
gtcggtgcggtcatcgaatctgtaaagaatctgcgcgatgtgataattttgacaatgttc
tccctatcggtgttcgcgctgatggggctgcaaatctacatgggcgtgctaacgcagaag
tgcatcaagaagttcccgctggacggctcctggggcaacctgaccgacgagaactgggac
tatcataatcgcaacagctccaattggtattcggaggacgacggtatatcctttccgttg
tgcggtaatatctctggagcggggcaatgtgaagacgattacgtgtgtctgcaggggttc
ggcccgaacccgaactatggctacaccagtttcgattcgttcggttgggcgtttctgtcc
gcgttccggctgatgacgcaggacttctgggaggatctgtatcagctggtgttacgcgcc
gcgggaccctggcacatgctgttctttatagtcatcatcttcctaggttcattctatctt
gtgaatttgattttggccattgttgccatgtcgtatgacgaattgcaaaagaaggccgaa
gaagaagaggctgccgaagaggaggcgatacgtgaagccgaagaagccgccgccgccaaa
gcagccaagctggaggagcgcgccaatgcgcaggcccaggccgccgccgatgcagctgcc
gccgaagaggcggccctacatccggagatggccaagagtccgacgtattcgtgcattagc
tatgagctgttcgtgggcggcgagaaaggcaacgatgacaacaacaaggagaaaatgtcc
atacgcagcgttgaggtggagtcggagtcggtgagcgttatacaaagacaaccagcacct
accacagcacaccaagctaccaaagttcgtaaagtgagcacgacatccttatccttacct
ggttcaccgtttaacatacgcaggggatcacgtagttctcacaagtacacgatacggaac
ggacgtggacgctttggtatacccggtagcgatcgcaagccgttggtattgtcaacatat
caggatgctcagcagcacttgccctatgccgatgattcgaacgccgttacgcccatgtcc
gaggagaacggggccataatagtgcccgtttattatggcaatctaggctccaggcattca
tcgtatacctcgcatcagtccagaatatcgtatacctcacatggcgatctactgggcggc
atggccgtcatgggcgtcagcacaatgaccaaggagagcaaattgcgaaatcgcaacaca
cgcaatcaatcagtgggcgccaccaatggcgccaccacctgtctggaccccaatcacaag
gtcgagcatcgcgacttcgaaatcggtctggagtgcacggacgaagctggcaagattaaa
catcatgacaatccttttatcgagcccgtccagacacaaacggtagtcgacatgaaagat
gtgatggtactgaatgacattatcgaacaggccgctggtcggcacagtcgggctagtgat
cgcggtgtctccgtttactatttcccaacagaggacgatgatgaggatgggccgacgttc
aaagacaaggccctcgaagcgttaatgaaaggcatcgaagtgttttgtgtgtgggactgt
tgctgggcttggttaaaattacaggagtggatctcgctgatcgtcttcgatccctttgtc
gagctcttcatcacgctgtgcattgtggtcaacacgatgttcatggccatggaccaccac
gacatgaacaaggagatggagcgcatcctcaagagtggcaattatttcttcacggcaaca
ttcgcaattgaggcaaccatgaaactgtgtgccatgagccccaagtactatttccaggag
ggctggaacatttttgacttcatcattgtggccctctcattgctggagctgggcctcgag
ggcgttcagggcctctccgtcttgcgctcgtttcgtttgctgcgtgtattcaaattggcc
aagtcctggccaacacttaatttacttatttcgattatgggacgcaccatgggcgctttg
ggtaatctgacatttgtactttgcattatcatcttcatctttgcggtgatgggaatgcaa
ctgttcggaaagaattatcatgatcacaaggatcgcttcccggacggcgacctgccacgc
tggaacttcaccgactttatgcacagcttcatgatcgtgtttcgggtgctatgcggcgag
tggatcgagtcaatgtgggactgcatgtacgtgggcgatgtatcgtgcattccattcttc
ttggccaccgttgttatcggcaatctagtggttcttaaccttttcttagccctgcttttg
tccaattttggctcatctagcttatcagcgccgacagccgataacgacaccaataaaata
gccgaggccttcaatcgaattggccgatttaaaagttgggttaagcgtaatattgctgat
tgtttcaagttaatacgtaacaaattgacaaatcaaataagtgatcaaccatcaggtgag
aggaccaaccagatcagttggatttggagcgaagagcacggcgacaacgagctggagctg
ggccacgacgagatactcgccgacggcctcatcaagaagggcatcaaggaggcgacacag
ctggaggtagccatcggcgatggcatggagttcacgatacacggcgacatgaagaacaac
aagccgaagaaatccaaatatctaaataacgcaacgatgattggcaactcaattaaccac
caagacaatagactggaacacgagctaaaccatagaggtttgtccttacaggacgacgac
actgccagcattaactcatatggtagccataagaatcgaccattcaaggacgagagccac
aagggcagcgccgagacgatggagggcgaggagaagcgggacgccagcaaggaggattta
ggtctcgacgaggagctcgacgaggagggcgaattggaggagggcccgctcgacggcgac
atcatcatacatgcaaccgatgaggatatactcgacgaatatccagctgattgctgcccc
gattcgtactataagaaatttccgatcttagccggtgatgatgactcgccattctggcaa
ggatggggcaatttacgactgaaaacttttcaattaattgaaaataaatattttgaaaca
gctgttatcactatgattttaatgagtagcttagctttggcattagaagatgtacatctg
ccacaaagacccatactgcaggatattttatactatatggacagaatatttacggttata
ttcttcttggaaatgttaatcaagtggttggcgctcggcttcaaagtgtacttcacgaac
gcgtggtgctggctcgatttcgtcattgtcatggtatcgcttatcaacttcgttgcttca
cttgttggagctggtggtattcaagccttcaagactatgcgaacgttaagagcactgaga
ccactacgtgccatgtcccgtatgcagggcatgagggtcgtcgttaatgcgctggtacaa
gctataccgtccatcttcaatgtgctattggtgtgtctaatattttggctaatttttgcc
ataatgggtgtacagctttttgctggaaaatattttaagtgcgaggacatgaatggcacg
aagctcagccacgagatcataccaaatcgcaatgcctgcgagagcgagaactacacgtgg
gtgaattcagcaatgaatttcgatcatgtaggtaacgcgtatctgtgccttttccaagtg
gccaccttcaaaggctggatacaaattatgaacgatgctatcgattcacgagaggtggac
aagcagccaattcgtgaaacgaacatctacatgtatttatatttcgtattcttcatcata
tttggatcatttttcacactcaatctgttcattggtgttatcattgataattttaatgag
caaaagaaaaaagcaggtggatcattagaaatgttcatgacagaagatcagaaaaagtac
tataatgctatgaaaaagatgggctctaaaaaaccattaaaagccattccaagaccaagg
tggcgtccacaagcaatagtctttgaaatagtaaccgataagaaattcgatatagtcata
atgttattcattggtctgaacatgttcaccatgacactcgatcgttacgatgcgtcggac
acgtacaacgcggtccttgactatctcaatgcgatattcgtagttattttcagttccgaa
tgtctattaaaaatattcgctttacgatatcactattttattgagccatggaatttattt
gatgtagtagttgtcattttatccatcttaggtctcgtacttagcgatattatcgagaaa
tacttcgtatcgccgaccctgctccgagtggtgcgcgtggccaaagtgggacgcgtactg
cgtctggtgaagggcgccaagggtatacgaacgctgctgttcgccctggccatgtcgctg
ccggcgctgttcaacatctgcctgctgctgttcctggtcatgttcatcttcgcgatcttc
ggcatgtcgttcttcatgcatgtgaaggagaagagcggcatcaacgacgtctacaacttc
aagacgttcggacagagcatgatcctgctctttcagatgtctacctcagccggttgggat
ggtgtactcgacgccattatcaatgaggaagcatgcgatccacccgacaacgacaaaggc
tatccgggcaattgtggttcagcgaccgttggaataacgtttctcctctcatacctagtt
ataagctttttgatagttattaatatgtacattgctgtcattctcgagaactatagtcag
gccaccgaggatgtgcaggagggtctcaccgacgacgattacgatatgtactacgagatc
tggcaacagttcgacccggagggcacccagtacatacgatacgaccagctgtccgagttc
ctcgacgtgctggagcctccgctccagatccacaagcccaacaagtacaaaatcatatcg
atggacatacccatctgtcgcggtgacctcatgtactgtgtggacatactggacgcactg
accaaagactttttcgcgcgcaaaggcaatcccattgaggagacgggcgagatcggcgag
atcgccgccaggccggacaccgagggctacgagcccgtctcctccaccctctggcgccag
cgggaggagtactgtgcccgcctcatccaacatgcctggcgcaagcataaaacgcgcgcc
gagggcggtggtgcaccgtccgacgcagaaggcggccccgaggatggcgacggtggcggt
gatgcgggtgatctggatgatccagatgctgcagccgatgcagcacccactggcccccat
gatggggcggcggcactcgatcccgagaacgatccatcgggcgctgcggcggccccacag
ccagccggcgacggcggcgagggaccggaaggaggagcaacagccgatccgcacgagagc
aatgtaaatagtccgacgatggacggcgccgcggcgacggcggcgggtagcccgggcgca
gggagcgccggcagcaccggccgacagacggccgtcctcgtggagagtgatgggtttgtg
accaaaaacgggcacaaggttgtaatacactcgcgttcgccgagcataacgtcgcgcacg
gcggatgtctga
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