Dreissena polymorpha (zebra mussel): 127843930
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Entry
127843930 CDS
T08834
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127843930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127843930
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127843930
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127843930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
127843930
NCBI-ProteinID:
XP_052229792
LinkDB
All DBs
Position
9:complement(76661865..76756562)
Genome browser
AA seq
2473 aa
AA seq
DB search
MNLDSLSFALAEISYSVANLTKKNFRSSVAEINHLVGQHGAEADRHLFRCLFSHIDFSSD
GKSAGKDFHQIQFLIQECGTLLSKPNFVSTLCFAIESPLHHQKTLKPSTQLFPQISKILR
LTRVQEVVFGLALLNSTSSELRNHSTQFVKQKLPDLLRSYIDADSAVRQEGGLQDIAIEV
LHLLLAHLVHSKEQFGIGSEQKEAFFSTLRKDFPRDRVPVVIGPLLYPETDDISVDKLVF
VTSMPKTHLDASLADMMQEYDFSCTASIEACRGLLLEFGARDLSPAVVARVFGMMAKNPS
SLPDQPTQVNTAPGSGWGDIGKDKMDQPGVNTWNVENFVQCIQDLAPNINWREVVGELDY
PQFFVANKRGLHVLKKGLILGLQEIFPVEYLYRLWKNTEGQLSFIIQSLRNPDVFCFADY
PCHSVVIDILKTPPDDEKREIVTWKSLDLVEVLLRLSEVGHYQQVLELFKFPVQNCPDML
VLALLQISPTWNTLKQELISMLMPLFLGNHQNSAVVLHYAWHCQGHSSTIRTLIMHSMAE
WYMRGEPHDQTRLSRILDVAQDLKALSMLLNATPFAFVIDLACLASRREYLKLDKWLGDK
IREHREPFIQMCVTFLKRRCPQLVGGFPKEDLKSQQLPPETIKVMLTCLQQVAGSINQEL
AEVILTMINNASMLMKQWQSSVGPKPPNPGTPGQAMGPGPGVPLGPTGIQGNPGLSMGLG
MGQNTMGSGMAGNTASQQVGMLDQVDKLGIPNSWGVPGQASTGFAGLGAPNNATPGSPAK
GFPTAGSNASFTGIQNLTSQLQNLPMPSSSGLPGMGTQRAPSVNTLGSLSAQQVIKQQTP
QPPNPLGQSQQQQQQQQQQQQQTMQQPQAPSDIFSLIPNFRQSFSIEVEDEANLYFQRIY
NQPPYPTISIDEVLETLKRFKDSAIKKEKEVHECMLRNLFDEYQFFPKYPDRELHTTALL
FGGIIEKGLATYMTLGLALRYVLEALRKPHGTKMYFFGIAALDRFKTRLKDYPSYCQHLA
AIPHFSQFPQTLIEYVEYGGRNQEPPSMLPAPPSTRSLTPVSASLNLLGGQSMFNVNLTS
SAAGSGSLGSSSLDSFNALMNMAATMTSTPTTTVTVTTSAMSAPTTTTSATKSQQMPKPS
IANATNIDTLLAGQSKEELVVPAESIQDRVFFIFNNLSLANMTQKCDELKKEVKEEHRQW
VAQYLVMKRASIEPNFHTLYANFVEALNIKEITDMVVLETFRNIKVLLRSDKGDANFSDR
TLLKNLGHWLGMLTLAKNKPILHIDIDLKSLVYEAYHKGARELLYVVPFSAKVLESCHKS
KVFRPPNPWTMGIMNVLAELHQEPNLKLNLKFEIEVLCKTLNLELHDLKPGNYLKDTSRL
TTLEPQLSVSKPIMPVPQPISTPQPEPPLAGPVLTNVTPTVSAPPPPPMAASTTPSSTPS
LPAEQMFAYEDINITSLAGLAQHINYSDQMLGVFQANPQLKQFVRHALERSVQDILPPVV
ERTLKIALRNCEQILKKDFALDPDENRMRQAARHMISSTTSGLALYTCREPLFTAISNNL
KNAFMTMVQNPTQQQKEMIEQAAQIIATNNTALASAFIQKTAVERAIPEIEKSLAADFES
RKVAREKGIRYCDPVVLTYQAERMPEQIRLKVGGETPQQIAVYEEFARNIPGFLPIMESP
MQAVVTKPVPSYPTTEAVFEKVAMELEQHLQQTMTTPSSNPLVVQIRGLLEAVITAMTTL
DMSSANALLQKAVEGFMELYTPMTPDQKLMLRFRECHLLVLKGLQQDQRAFGPQWTKQIT
RCLIECVHDNNRFNIEAVDVLIRSGLVSVPQYDVYLCQLMEDNNMMAISLAMQLVQRYCI
DDKANSSVTEADFCNTIEFLNLLAAKMRQPPSELTNLLDGLRQSATTVSAADYGMLDRPL
RGPTSMMQSGISQAREIEDPPGLPEKTEYLLREWVNMYHSPAAGRDSTKAFSLFVQQMHQ
QGILKTDDLITRFFRLCTEMCVDLCYRALSEQAQTQNVAMTRNKCFPTLDAFVRLIMLLV
KHSGDNSNTNTKINLLNKVLGIVAGVLLQDHEVRGEEFQQLPYHRIFIMLFIDLNGPEHV
LEVINFQILTAFCNTYHVLRPTKAPAFMFAWLELISHRVFIGRMLSLTPQQRGWGMYAQL
LIDLFKFLYPFLRNAELTQPIHFLYKGTLRVLLVLLHDFPEFLCDYHYAFCDVIPPNYIQ
MRNLILSAFPRNMRLPDPFTPNLKVDMLPEIQHAPRIPLNFANMITPNSFKIDLDSYLKT
RSPVTFLSDLRISLQSKEPGSRYNIPLMNALVLYVGTQAITHIHTKGLTPSMSTIAHSSH
MDIFQNLAVDLDTEGRYLFLTSIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRV
LLERLIVNRPHPWGLLITFIELIKNPQFKFMNHEFVHCAPEIEKLFESVVRSCVIQSKTT
VTPSRDQDTSDLH
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagactcgctctcatttgccttagctgaaataagttattcggtggcaaatctt
acgaagaaaaacttcaggtccagtgttgctgaaataaatcacttggtgggacagcacgga
gcagaggctgatcggcacctgtttcgctgtctcttctcccacattgacttcagcagtgat
ggtaaaagtgctggcaaagatttccatcagatacagttcttgatacaggagtgtggtacg
ctactcagcaagccaaacttcgtctctacattgtgttttgctatagagagtcctctacat
caccagaagactttaaaaccctcgactcagctgttcccacagatcagtaagatcctacga
ctgacccgtgtgcaggaagttgtgtttggactcgcacttctgaattctacgagctcagaa
ctccgaaatcactccacgcagtttgtgaagcagaagctaccagacctactacgttcctac
atagatgcagactcagctgtgaggcaggaaggtgggctgcaggatattgctatagaggtg
ctacatctcctcttggcacatctggtccactccaaggaacagttcggcattggatcagaa
cagaaggaggccttcttctctactctaagaaaagatttccctcgcgaccgcgttccggtt
gttattggcccactgctctacccggagactgacgacatctccgtggataagctagtgttt
gtaaccagcatgcccaagacccatctggatgcctcactagcagacatgatgcaagaatat
gacttctcttgcacagccagcattgaagcatgtcggggcctgctcctggagtttggagct
cgagacctgagcccggcagtggtggcgcgggtgttcggcatgatggctaagaacccttcc
agtcttccagaccaacccacacaggtgaacactgcaccgggcagtgggtggggcgacatt
ggcaaagataagatggaccagcctggtgtgaacacatggaatgtggagaactttgtgcag
tgcatacaggacttggctcccaacattaactggcgtgaggtggtgggggagctggactac
cctcagttctttgtggccaacaagcggggcctacacgtgctcaagaaggggctcattctg
gggctacaggagatcttccccgtcgaatatctttacaggctgtggaagaatacggaggga
cagctctcgttcattatccaatccctgcgcaatcctgacgtgttctgcttcgctgactac
ccgtgtcactctgtggtcattgacatcctgaagacaccaccggacgacgagaaacgagag
atcgtcacatggaaatccctggacctggtagaggtgctactgcgcctgtcggaggtggga
cactatcagcaggtcctggaactcttcaagttccctgtacagaactgccctgacatgctg
gtccttgcgctactgcagatttctccgacatggaacaccctgaagcaggagctgatctcc
atgctgatgcctctgttccttggcaaccaccagaactctgcagtggtgctgcactacgcc
tggcactgccagggccactcgagcaccatccgcaccctcatcatgcactcgatggccgag
tggtacatgagaggggagccccacgaccagaccaggctctcacggatactggatgtggct
caggaccttaaggccctctctatgctgctcaacgccacaccgtttgcattcgtcattgac
ctggcctgcctggcctcgcgcagggaatacctcaaactggacaagtggctgggagacaag
ataagagaacacagggagccgttcatccagatgtgtgtgacgttcctgaagcgtcgctgc
ccccagttggtcggtggtttccccaaggaggacctcaagagtcagcagttgcccccagaa
accatcaaggtcatgttgacctgtctacagcaggttgcaggaagtatcaatcaggagtta
gcggaggtcatactgacaatgattaacaacgccagcatgctgatgaagcagtggcaaagc
tcagtcggaccgaaacctcccaaccctggcactccgggacaagcgatgggtcccggaccg
ggtgtgccacttgggccaacaggaattcagggcaatcccggcctcagcatgggtctggga
atgggtcagaacaccatgggctctggaatggctggaaatacagcctcacagcaggtggga
atgttggatcaagtggacaagctgggtattcccaactcatggggtgtgcctggtcaggcc
agtacagggtttgcgggccttggtgcacccaacaacgccactccgggctctcctgccaag
ggcttccctactgcgggctccaatgccagcttcactggaatccagaacctcacctcacag
ctgcagaacctgccaatgccatcctcctcggggctgccaggcatggggacacagcgtgcg
cccagtgttaacaccctcggctctctgagtgcccagcaggtgatcaaacaacagaccccg
cagcccccaaatccccttgggcaatcacagcaacaacagcagcagcaacaacagcagcag
cagcaaaccatgcagcagccacaagccccgtcagacatattcagcctgattccaaacttc
cgtcagtcgttcagcattgaggtggaggatgaggcgaacctgtacttccagcgtatctac
aaccagccaccctaccccaccatctccatcgacgaggtcctcgagacactcaaacgattc
aaggactcggccattaagaaagagaaggaagtacacgagtgtatgctgagaaatctcttt
gatgagtaccagtttttcccaaaatacccggaccgggagcttcacaccactgccttgctg
tttgggggcatcattgagaaaggactggccacgtacatgacccttggcctggctctgcgc
tatgtacttgaagcactgaggaaaccacatggtaccaagatgtacttctttggtatcgct
gccctggatcgcttcaagacaaggctcaaggattatccgtcgtattgtcagcatttggcg
gccattccacacttcagtcagtttcctcaaacactgatagagtacgtggagtacggaggc
aggaaccaggagccccccagcatgctgcctgccccacccagcacccgcagtctcacccct
gtctctgccagcctgaacctcctggggggccagtccatgttcaacgtcaacctgacctcg
tcagctgctgggtcagggtcgctggggtccagctccctggactcctttaacgctttgatg
aacatggctgctacaatgacgtccacgcccaccaccacggttactgtgacgacgtcagcc
atgtcggctcccaccacaaccacgtctgctacgaaatctcagcagatgcctaagccctca
attgccaatgccaccaacattgacacactgctagccggccagagcaaggaagagctggtc
gtaccagcagagtccattcaggatcgggtgttcttcatcttcaacaatctctccctagca
aacatgacacagaagtgtgatgaactgaagaaggaggtgaaggaagagcacaggcagtgg
gtggcccagtacctcgtgatgaagagggccagcattgagcccaacttccacacactctac
gccaactttgtggaggccctcaacatcaaggaaatcactgacatggtcgtcctggagacg
ttcagaaatatcaaggtgttgctgcgaagtgacaaaggtgatgccaacttctctgacagg
accttgctgaagaacctcggacactggctgggaatgcttacactggccaagaacaaaccc
atcctccatattgatattgacttgaagtcccttgtttacgaggcgtaccacaaaggggct
agagaacttctgtatgtcgttccgtttagcgccaaagtgctcgagtcttgccacaaaagc
aaggtattccgcccgcccaatccctggaccatgggcatcatgaacgtgttggcagagctg
catcaagaacccaatctgaaactgaacctgaagtttgagattgaagtgctctgtaaaaca
ctcaacctggaactccatgatttaaagcccggcaattacctgaaggacacaagtcgactg
accaccctggaacctcagctctccgtgtcaaaacccatcatgcctgtccctcaacccatc
tctacgcctcaaccagaaccacccctagctggtccagttctaacgaacgtgacgccgaca
gtctctgcgccgccaccacctccgatggcagcatccactacgccgagctctacgcccagt
cttccggcagaacagatgtttgcatatgaggatatcaacatcacgtccttggcaggtctt
gcccaacatatcaactacagtgatcaaatgcttggtgtgttccaagctaatccacagctg
aagcagtttgttcgccatgccctggaaagatctgtccaggacattctgccccctgttgtt
gaacggacactgaagattgcactgcgaaattgtgaacagatccttaagaaggactttgcc
cttgaccccgacgagaaccggatgcgtcaggcagcccgtcacatgatcagcagcacgacc
tcaggtcttgctctgtacacctgcagggaaccactgttcacagccatctccaataaccta
aagaacgcttttatgacaatggttcaaaacccgacccagcagcagaaggagatgatcgag
caggctgcccaaatcattgccacgaacaacacggccctggccagcgccttcatacagaag
actgccgtggagagagcaatacctgagattgagaaaagcctcgctgctgacttcgaaagc
cgtaaggtggctcgggagaaaggtatccggtactgcgacccggtcgtgttgacctaccag
gctgagcggatgccggagcagatccggctcaaagtgggtggggagacgcctcaacagatc
gcagtgtatgaggagtttgccaggaacattcccgggttcctgcccatcatggagtcaccc
atgcaggctgtggtcactaagcctgtgccttcataccctacaacggaggcagtgtttgag
aaggtagccatggagctggagcagcatcttcagcagacgatgaccacgccctcatccaac
cccctcgtggtccagatcaggggtctactagaggccgtcatcacggcgatgaccaccctt
gacatgagctcggccaacgcactgctgcagaaggccgtggaaggttttatggaattgtac
actccaatgacccctgaccagaaactgatgctgagattccgcgagtgtcacctgttggta
ctgaaggggcttcaacaggaccagagggcctttggaccccagtggactaaacagatcacc
aggtgtctgatagagtgcgtgcatgacaacaaccgcttcaacattgaggcagtggacgtg
ctgatccggtctgggctggttagcgtgccccagtacgacgtgtacctgtgtcagctgatg
gaggacaacaacatgatggccatctccttggccatgcagctcgtccagagatactgcatt
gacgataaggctaactcttcagtcactgaggctgacttctgcaacactatcgagttcctg
aacctgttggctgctaagatgagacagcccccatctgagttgaccaacctcctggatggc
ctccgtcagtctgccaccactgtgagtgcagcggactacggcatgctagatcggcctctc
cgtggacccacgtccatgatgcagtccgggatcagccaggcccgggaaatcgaggaccct
cccggacttccggagaagaccgagtacctgctccgggaatgggtcaacatgtaccactca
cctgccgctggccgcgacagcactaaggccttctccttgtttgttcaacagatgcatcag
cagggtatactgaagacagacgacctgatcacccgtttcttccgtctgtgcacggagatg
tgcgttgatctgtgctaccgagcactgtcagagcaggcccagacacagaacgtcgccatg
acacgcaataagtgcttcccgacgctggacgccttcgtgaggctgatcatgctgcttgtg
aagcattctggagataactccaacaccaacacaaagatcaatctgctgaacaaggtgctg
ggcatagtggctggggtgttgctccaggaccatgaggtgaggggagaggagttccaacag
ctgccctatcacagaatctttatcatgctctttatcgacctgaacgggccagaacatgtc
ctagaagtgattaacttccagatattgacagctttctgcaacacttaccacgttctgcgt
ccgaccaaggcgcctgcgtttatgtttgcgtggctggagctcatatcccatcgtgtgttc
atcgggcgcatgctatcactgacaccacaacagaggggttggggaatgtatgcccagctg
ttgatagacctcttcaagttcctctacccgttcctgagaaatgctgagcttacacagccc
atacatttcctatacaagggcacactgcgggtcctgctagtcttgctgcacgatttccca
gaattcctgtgcgactaccactatgcgttctgtgacgtcatcccacccaactacatccag
atgcgcaacctgatcctgagtgcgttcccccgtaacatgcgcctgccagacccgttcact
ccgaacctgaaggttgacatgctgccagagatccagcacgcgcctaggatcccgctgaac
tttgcaaacatgatcacgccgaattccttcaagatcgatttggactcgtacctgaagacc
cgttcacccgtgaccttcctatcggacctgcgtataagcttacagtcaaaggagccgggc
tcacgctacaacatcccgctgatgaacgcgctggtgctgtacgtgggcacgcaggctatc
acccacattcacactaaggggctaacccccagtatgagcaccattgctcactcctcacac
atggatatattccagaacctggctgtcgacctcgacacagaggggcgctacttgttcctg
acgtccattgctaaccagctgcgctaccccaacagccacacccactacttcagctgcacc
ctgctgtacctgtttgcagaggccaatactgaggccattcaggagcagatcacaagagtg
ttgctggagcgtctgattgtcaaccggccccacccctggggactgctcatcaccttcatc
gagctcatcaagaacccgcagttcaagttcatgaaccacgagtttgtccactgtgctcct
gagatagagaagttgtttgagtcggtggtgcgatcctgcgtaattcagtccaagacgacc
gtgacaccgtcacgtgatcaagacaccagcgatctgcattga
DBGET
integrated database retrieval system
