Dreissena polymorpha (zebra mussel): 127856166
Help
Entry
127856166 CDS
T08834
Name
(RefSeq) tetratricopeptide repeat protein 37-like isoform X1
KO
K12600
superkiller protein 3
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127856166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127856166
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
127856166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_11
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_1
TPR_12
TPR_17
TPR_8
ANAPC3
TPR_7
ARM_TT21_2nd
TPR_15
DUF3856
TPR_9
TPR-S
ARM_TT21_C
TPR_4
Motif
Other DBs
NCBI-GeneID:
127856166
NCBI-ProteinID:
XP_052248166
LinkDB
All DBs
Position
1:152014338..152112502
Genome browser
AA seq
1306 aa
AA seq
DB search
MDPKQSKAFLRNARESIRKKEFKEAETQCKDILANDSTNYMALVLLAVAAEGLSENDQAL
SAYRQATLADDSQILAWQGLCNFFEKNSIPAYANEQCGVYLKLLQMNKDDIGKKKEIIFN
MVKISEHIKDAEKIQQIPELCRKYLSTSTDYTDATEVVLAYYLPALLKTCPEDLPAETEH
FLNNFPSSPAVLKHKMLSVLDICIGQLSVSSEVLTNHVTRYEAVTAGKDCDVLATAQACL
AVIANDFKKSRSLLEKVCNKNPMLVCSHCLLAESLYKLHQYDTAIKLCQSGLSLLDRKDR
VLTCKPGPVRNFLNLLMVQALVQTGDPTKLNRALEICTKELDDNSEVQLLKGNVYFRQRD
FKAAKGCLLGDSVEKQVLEGLIDLEENNLESAKSRFESLLAAEPDVASHHLNLAKCLWKM
GTAREYSFTLLLKAAKLSPETSEAFLYLGHYYGQEGGDRIRARKCYQKAFDLDPSSEVAG
EKLCDFLTEIGEDEKCHQILLQFTSSCPPGRGKWAWLRLGLHQMKHDDPSVAIVSLQSAL
RADSKDVHVWECLGEAYMARGSYTAALKAFIRATELDQSSVYSLFQIASIKQALGQYTEA
LQEYTHILRQAEDYVPALKGLGETYVSIAHNHLSNCFHGRAKDTAELAVDCLFRACKLRP
DVSCLWKLMGDACTILHVLPEFRFLRPDKGVWTKVELLKVGSGCYIRALKIMPELSPLWH
DLGLNYIYQSQCTSGSEAISLAERSVQSLKKAIQLEPGNYKHWNALGYVACQNVYFKPDL
AQHCFIKSTQLETNNVAAWTNLAALYLKHDNIKLGHEAFKIAQSLEPSYVACWIGQAIIA
ELVGHEDAMDLFRHTTELSNHPEGALGYGHWVCSMLLQSDKKDSPMYVYAIEQMAAIPAA
SDALARYTDRIKTNPVAYVLHGLLLQRQKLYKTAAHQLQIAVRLYEEAGDQGDQWRAALA
NCAMSLRQSGRADEACDMYERLGDTSDPGVLHQWGLALYQRGLYQQALQVYHKAAELSGS
NLERSHVMAAMAMSLYRLGDLDSTKTTLFHSSQSEEVSIHGLKGLCALGLLLADPSLAQA
AIHELAGFSNHPHHGGDILLLQCITYLTQGNIEQAKKIVQCSLHENPCQGNAWHLLSVLL
LKHFPKIPVAATACSRNAVLFNHQSVNKIERFLVPLADIQDGYHGNSTSCRNAFLSAQRA
VHLYPENISGWLTLSSAIGMEALCASDVRKRSLFEQQYYLLSQLYQTEKDTATCCWCLRQ
KVTCSAQAGLHNRVMDDLDVLMTEFGEIPSVLELFNIIKDGLQKRQ
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaacaaagtaaagcatttctgaggaatgctagggagtcaattaggaagaaa
gaattcaaggaagctgaaacacagtgcaaggacattcttgcaaatgacagcaccaactac
atggccctggtgttgttggcagttgctgcagaagggttgtcagagaatgatcaagctcta
tcagcatacagacaggctacactggcagatgactcgcaaatacttgcttggcagggcctt
tgcaacttctttgagaagaattccataccagcgtatgccaatgaacagtgtggtgtttac
ctgaagctgttgcagatgaacaaagatgatattggtaagaagaaagaaattatttttaat
atggtgaaaatatcagagcatatcaaggatgcagagaaaatccaacagattccagagcta
tgcaggaagtacttgagtacaagtacagactacactgatgcaacagaggttgttctggcc
tactatctccctgccctacttaagacatgtccagaagaccttcctgcagagacagaacac
ttcctaaacaattttccatcctcgccggcagtattgaagcacaaaatgttgtcagttctg
gacatctgcattggtcaactgtctgtctcatctgaggtattgacaaaccatgtgaccaga
tatgaagctgtcactgctggcaaggactgtgatgttcttgccactgcacaggcatgtttg
gcagtgattgccaatgacttcaagaaaagtcggtcccttttagaaaaagtgtgcaataag
aaccctatgcttgtgtgtagccactgtttgctggctgagtctctctataagctgcatcag
tatgacactgccatcaaactgtgccagtcagggttgagcttgctagacagaaaggaccga
gtgctgacatgtaagcctggcccagtgaggaacttccttaaccttctgatggtgcaagct
ctagtgcaaactggtgaccccacaaaactgaacagggctcttgaaatctgcacaaaggaa
ctggatgacaactcagaagtgcagcttttaaaaggaaacgtttacttcagacagcgagac
ttcaaggctgcaaagggatgcttgttgggtgattctgtggagaagcaagtcctggagggc
ttgatagacctcgaggaaaataatctggaatctgccaaatccagatttgaatcactgttg
gcagcagagcctgatgtagcctcccaccacctgaacttggccaagtgcctctggaagatg
ggcacagccagggaatatagctttacactactgctcaaggctgccaaactgagccctgaa
accagtgaggcatttctctacctgggtcattactatgggcaagagggtggggacagaatc
cgagcccggaaatgttaccagaaggcatttgaccttgaccccagcagtgaggtcgcagga
gagaaactgtgtgacttcctgacggagattggagaagatgagaaatgccatcagattctg
ctacagttcaccagttcatgcccacctggccgaggcaagtgggcgtggctgaggctgggg
ctgcatcagatgaaacatgatgatccctctgtggccattgtgtccctccagtctgcattg
agagcagactctaaagacgtccatgtgtgggagtgtttaggggaggcatacatggcccgt
ggtagctacacggctgcgttgaaggctttcatcagagcaaccgagcttgaccaatcatct
gtctacagcctgttccagattgcctctataaagcaggccctgggacagtacactgaggct
ctgcaggagtacactcacatactcagacaggctgaggactatgtacccgctctgaaaggc
ttgggagagacctatgtttcaattgcccacaatcatcttagcaactgtttccatgggcgg
gcaaaagacacagcagagctggcagttgactgcctgtttagagcatgcaagctgaggcca
gatgtctcttgtttgtggaaactgatgggggatgcctgcactattctccatgtgttacca
gagttcagatttttgagacctgacaaaggtgtttggactaaagtagaacttttgaaagtg
ggaagtggatgctatatcagagccttgaagatcatgccagagctatctcccttgtggcat
gacctgggacttaattatatctaccaatcacagtgcacctctgggagtgaggccatttca
ttggctgaaagatctgtccaatccctgaagaaggccatccagttggaaccaggaaattac
aagcattggaatgccttgggatatgttgcatgccagaatgtgtatttcaagccagacttg
gcccaacactgcttcataaagtcaacacagctagaaacaaacaatgtggcagcatggacc
aaccttgcagctctctacctaaaacatgataatataaagttgggccatgaagcgttcaag
atagcccagagcctagagccctcctacgtggcctgctggataggtcaggccatcatagcg
gagctggtgggacatgaggacgccatggatctgttcaggcacaccacagagctcagcaat
catccagagggtgctcttgggtacggccactgggtgtgcagtatgctcctacagtcagac
aagaaggacagtcccatgtatgtgtacgccatagagcagatggcagccatcccagcagcc
tccgatgccctagccagatacacagatcggataaagaccaatcctgtggcctacgtactt
catggcctgcttctacagagacagaagctgtacaagactgctgcccatcaacttcagatt
gcagtgagactgtatgaggaggcaggggaccagggagatcagtggcgtgcagcgctggcc
aactgtgctatgagtctcagacagagtggtcgggcggatgaggcctgtgatatgtatgag
agactgggagacacatcggaccccggggttctacaccaatggggtctggccctgtaccag
aggggcctctaccaacaggcgctacaagtttaccacaaggcagcagagctgtctggtagc
aaccttgagaggtcacatgtcatggctgccatggcaatgtcactgtacaggctgggggac
ctagacagcactaagacgactttgtttcatagctcacagagtgaggaggtatccatccat
ggactgaagggtctgtgtgccctggggctgctactggcggacccctccctggctcaagca
gccattcacgagctagcgggcttctccaaccacccacatcacgggggcgacattctgctg
ctgcagtgtatcacatatctcacacagggcaacatagagcaagcaaagaaaatagtgcag
tgcagccttcatgaaaacccttgtcaggggaatgcctggcatttattgtcagttttactt
ctcaagcactttccaaagataccagtggcagctactgcatgctcaaggaatgctgttcta
tttaaccatcagtcagttaataagattgagaggttccttgtgccattggcagatattcaa
gatggttaccatggtaacagcactagctgcagaaatgcttttctcagtgctcagagagca
gtgcacttgtatccagagaatatttcaggctggctgacgctttcatctgctattggtatg
gaggcattgtgtgccagtgatgtgagaaagaggagcctgtttgagcagcagtattacctg
ctatcacagctctaccaaacggagaaagacactgccacatgttgctggtgtcttcgtcag
aaggtcacatgttctgcacaggctggactgcacaatagagttatggatgatttagacgtg
ttgatgacagagtttggagagattccatcagtactggagctgtttaatatcattaaagat
ggtctacagaagaggcaatga
DBGET
integrated database retrieval system
