Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_149604
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Entry
DICPUDRAFT_149604 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03020
RNA polymerase
dpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DICPUDRAFT_149604
09124 Replication and repair
03420 Nucleotide excision repair
DICPUDRAFT_149604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpp03021
]
DICPUDRAFT_149604
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_149604
Enzymes [BR:
dpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DICPUDRAFT_149604
Transcription machinery [BR:
dpp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
DICPUDRAFT_149604
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
DICPUDRAFT_149604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
10499211
NCBI-ProteinID:
XP_003285719
JGI:
Dicpu1_149604
UniProt:
F0ZE84
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
MAAFFPPSSAELRKVKKVQFGILSPDEIRNMSVARIEHPETYENGKPKIGGLLDPAMGTI
DKTQRCQTCSGTMAECPGHFGHIELAKPVFHIGFIDTVLKILRCVCFHCSKLLTDTSEYS
FRQALKIKNQKHRLNAVVEICKNKKVCAIGGNEEEEEHDLSKTDEELDKAVKHGGCGNVL
PKITKEDLKIIVEFKDVTDESIEKKSVLSAERVLNILKRIKDEDSIAMGINPDWAKADWM
VATVLPVPPPPVRPSIMMDTSTRGEDDLTHKLADIVKANKELQRQEKNGAPAHIITEATQ
FLQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGKEGRIRGNLMGKRVDFSARTVIT
ADPNLSIDQVGVPRSIALNLTYPETVTPFNIDKMRELIRNGPNEHPGAKYIIREDGTRFD
LRFVKKVSDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSV
TSPYNADFDGDEMNLHVPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQDTLLGSRLF
TKRDTFIERDLVMNILMWLPSWDGKVPPPAILKPKQLWTGKQLFSLIIPDINLIRFTSTH
NDKEPNECSAGDTRVIIERGELLAGILCKRSLGAANGSIIHVVMNEHGHDTCRLFIDQTQ
TVVNHWLINRGFTMGIGDTIADAQTMEKVTLTISSAKNQVKELIIKAQNKQFECQPGKSV
METFEQKVNQVLNKARDTAGSSAQNSLSEANNLKAMVTAGSKGSFINISQMMACVGQQNV
EGKRVPFGFQSRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
TSETGYIQRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGEDGIDGCFVESQSIDSLRKDN
HDLERMYKHMVEKPDYGEGWMDPLVIELVRGDPLIRDTLEKEFERIKSDRTLMRNEIIPT
GENSWPLPVNLRRLITNAQKLFNIDIRRVSDLNPAFVVLEIEKVVSRLKIIATADTTEDD
ESFNRAWSEVYHNATLLFSILVRSTMASKRVLTEFRLTEKAFLWVVGEIESKFLQALAHP
GEMVGALAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINIAKQVKTPSLTIYL
KPHIARDMDCAKTVKSHLEYTTLANVTSATEIYYDPDPENTIISEDAEFVNSYFEFGMNE
DVGVERMSPWLLRIELDRGMVTAKKLTMAEITQCVVRDFGLNLNCIFSDDNADKLILRIR
MVESEDMKTENDDDDQFLRRIESNMLSGMVLRGIKGIKKVFMRTDDKIPKILDDGSYGNR
EEWILDTDGVSLLEVMSHPDVDHSRTTSNDIVEIIQVLGIEAVRNALLKELRAVISFDGS
YVNYRHLAVLADVMTYRGHLMAITRHGINRVETGPLMRCSFEETVEILMDAAMFSETDDV
KGVTENIILGQLPPLGTGSFEVYLNQDMVKNAHSIALPEPSAISYPDTPGSQTPSYSYDG
SSTPFHNPYDAPLSPFNETYRGDFSPSAMNSPAYKGGYGSSYSYFPQSPTYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYNPTSPYS
YSTYGSKGSSNNNKK
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattctttccgccatcatcagcagaacttagaaaagttaaaaaggttcagttt
ggtatcctcagcccagatgaaattagaaatatgtcagttgcgcgtattgaacatccagaa
acatacgaaaatggcaaaccaaagattggtggtttattagacccagctatgggtacaatt
gataaaactcaaagatgtcaaacttgttcaggtacaatggcagagtgtcccggccatttt
ggtcatattgaattggctaaacctgtttttcatattggttttatagatacagtattaaaa
attttaagatgtgtttgtttccattgttcaaaattattaactgatacaagcgaatattca
tttagacaagctttaaaaattaaaaatcaaaaacatagattaaatgcagttgtagaaatt
tgtaagaataaaaaagtgtgtgcaattggtggtaatgaggaagaggaagaacacgatctc
agtaaaacagatgaagaattagataaagcagttaagcatggtggttgtggtaatgtatta
ccaaagattaccaaagaagatttaaagattattgtagagttcaaagatgttacagatgaa
tcaattgaaaagaaatcagttttatcagcagaacgtgttttaaatattttaaagagaatc
aaagatgaagactcaattgcaatgggtatcaatccagattgggccaaggccgattggatg
gttgctacagtattaccagtaccaccaccaccagttagaccatcaattatgatggatact
tcaacaagaggtgaagatgatttaacacataaattagcagatatcgtcaaagccaataaa
gaattacaacgtcaagaaaagaatggtgctccagcacatattataacagaagccacacaa
tttttacaatttcacgttgctacatatgttgataacgaaattccaggtctcccacaagct
caacaacgttctggtagaccattaaaatcaattcgtcaacgtttaaagggtaaggaaggt
agaattagaggtaatcttatgggtaaacgtgttgatttctctgcacgtacagtaattact
gccgatccaaatctttcaattgatcaagtaggtgttccacgttcaattgcactcaatctt
acttatccagaaactgttacaccattcaatattgacaagatgagagagttaattcgtaat
ggtccaaatgaacatccaggtgccaaatatattatccgtgaagatggaactcgtttcgat
ttacgttttgttaaaaaagttagtgatacacatttagagtgtggttataaagtcgaaaga
cacattaacgatggtgatgtagttattttcaatcgtcaaccatctcttcataaaatgtct
atgatgggtcatcgtatcaaggttatgccatattcaacttttcgtttaaatctttctgta
acatcaccatataatgcagattttgatggtgatgaaatgaatcttcacgttccacaaact
ttagaaactcgtgccgaagttatcgaaattatgatggtaccacgtcaaattgtttctcca
caatcaaatcgtccagttatgggtattgtacaagatacacttttgggcagtcgtcttttc
acaaagagagatacttttatcgaaagagatttagttatgaatattttaatgtggttacca
tcatgggatggtaaagttccaccaccagcaattttaaaaccaaaacaattatggaccggt
aaacaacttttctcactcatcattcccgatatcaatttaattcgtttcacaagtactcac
aatgataaagaaccaaatgaatgttctgctggcgatacaagagtcatcatcgaaagaggt
gaattgttggctggtattctttgtaaacgttctttgggtgctgctaatggttcaattatt
cacgtagtaatgaacgaacatggtcatgatacttgtcgtctctttattgatcaaactcaa
actgtagttaatcattggttaatcaatcgtggtttcacaatgggtattggtgatactatt
gctgatgctcaaacaatggaaaaggttactcttacaatttcatctgctaaaaatcaagta
aaagaattaattatcaaagctcaaaataaacaattcgaatgtcaaccaggtaaatctgtt
atggaaacttttgaacaaaaagtaaatcaagtattaaataaagctcgtgatactgctggt
agtagtgctcaaaattcactttcagaagcaaataatttaaaggcaatggtaactgctggt
tcaaaaggttcattcattaatatttcacagatgatggcttgtgtaggtcaacaaaatgtc
gaaggtaaacgtgtaccatttggtttccaaagtagaacattaccacatttcactaaagat
gattatggtccagaaagtcgtggttttgtagagaatagttatttaagaggtctcacacca
caagagtttttcttccatgctatgggtggtagagaaggtcttattgatactgctgtaaaa
acatcagaaactggttatattcaacgtcgtcttgtaaaggctatggaggatgtatcaatc
aaatatgatgccactgttagaaactcattgggtgatgttattcaatttgcttatggtgaa
gatggtattgatggttgttttgtcgaaagtcaaagtatcgattcattaagaaaagacaat
cacgatctcgaaagaatgtataaacatatggttgaaaaaccagactatggtgagggttgg
atggatccattggttatcgaattggttagaggtgatccattaattcgtgatacattagaa
aaggaatttgaacgtattaaatcagaccgtactcttatgagaaacgaaattatacccact
ggcgaaaacagttggccattaccagttaatcttcgtcgtttaattacaaatgcccaaaaa
cttttcaatattgacatcagaagagtcagtgacttaaatcctgcttttgttgttttagaa
atagaaaaagtagtttcccgtttaaagattattgccaccgctgatactactgaagatgat
gaaagctttaaccgtgcttggtcagaagtatatcacaatgccactttattattctcaata
ttagtacgtagtacaatggctagtaaacgtgttttaaccgaattccgtttaacagaaaaa
gctttcctctgggttgttggtgaaattgaaagtaaattccttcaagctcttgcacaccca
ggtgaaatggtaggtgctcttgcagctcaatctattggtgaaccagctactcaaatgact
ttaaatactttccattatgctggtgtaagtagtaagaatgtaactcttggtgtaccacgt
cttaaagaaattattaatattgccaaacaagttaaaactccatcacttacaatttatttg
aagccacatatcgctcgtgatatggattgtgctaaaactgtaaagtcacatctcgaatac
accacattggctaatgttacctcagctaccgaaatttattatgacccagatccagaaaat
accattatcagtgaagatgctgagtttgtaaatagttattttgaatttggtatgaatgaa
gatgttggtgtcgaacgtatgtctccatggctccttcgtatagaactagacagaggtatg
gtaactgcaaagaaattaacaatggccgaaattacccaatgtgtagtcagagattttggt
ctcaatttaaattgtatttttagtgatgataatgccgataaacttattcttcgtattcgt
atggtcgaaagtgaagatatgaaaacagaaaatgacgacgatgatcaattcctccgtcgt
atcgaatcaaatatgttaagtggtatggttttacgtggtatcaagggtatcaagaaggta
ttcatgcgtactgatgacaagattccaaagattttagatgatggcagttatggtaatcgt
gaagaatggattttagatactgatggtgtctcattacttgaagtaatgagccatccagat
gtagatcattcaagaactacttcgaatgatatcgtagaaattattcaagtacttggtatc
gaagctgttagaaatgcactcttaaaagaacttagagctgttatttctttcgatggttcc
tatgtaaattatcgtcatttagcagttttagcagatgttatgacatatagaggccatctt
atggctattacccgtcatggtatcaatagagtcgaaactggtccattgatgagatgttcc
ttcgaagaaactgtagaaattcttatggatgccgccatgttctccgaaactgatgatgtt
aaaggtgttactgaaaatattattttgggtcaacttccaccattaggtaccggtagcttt
gaagtttatcttaatcaagatatggttaaaaatgctcactctatcgctttaccagaacca
tctgccatctcctatccagatacaccaggtagccaaaccccatcatattcatatgacggt
agctcaactccattccataatccatacgatgctccattatcaccatttaacgaaacctat
cgtggtgatttctcaccatctgctatgaattcaccagcttataaaggtggctatggtagt
agttattcatatttcccacaatcgccaacttattcaccaacctcaccaagctactcacca
actagtccaagttattcaccaacctcaccatcatactctccaacttcaccatcctattca
ccaacctccccaagctattcaccaacttcaccatcatactctccaactagtccaagttat
tcaccaaccagtccaagctactccccaacttcaccatcatactcaccaactagtccaagt
tattcaccaacttcaccattttattcaccaactagtccaagctactcaccaactagccca
agttattcaccaacttcaccatcatattcaccaacctcaccatcatattcaccaacctca
ccaagttattcaccaactagtccatcatattcaccaactagtccatcatactccccaact
agtccatcatactccccaacctccccatcatattcaccaacttccccatcatactcccca
actagtccatcatactctccaacttcgccatcatactccccaactagtccatcatactct
ccaacttcgccatcatactccccaacttcaccatcatacaacccaacctcaccatattca
tattctacttatggtagcaaaggttcatcaaataataacaaaaaataa
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