Dermatophagoides pteronyssinus (European house dust mite): 113795783
Help
Entry
113795783 CDS
T05775
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dpte
Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113795783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpte03019
]
113795783
Messenger RNA biogenesis [BR:
dpte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113795783
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113795783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
113795783
NCBI-ProteinID:
XP_027201805
UniProt:
A0A6P6Y922
LinkDB
All DBs
Position
Unknown
AA seq
2004 aa
AA seq
DB search
MDFIDMEFIKQTDQNQSVMTSGSGTATTSSSCSSSSSSLEETSYFIESIRHSNVTPTLIT
AYLIKLCDSKINCTEDLLIKFANIIVENLICESPLSEILRQLDSVDFYKKLFNHQQFDFN
KFLIVCRYLCSSDKQGLDILGLTFFSKVWKNNAHFQQQVIRYCIVSDWIQQILSKCTHPT
LIKKVPQIENLKCPMEYETDCQIYCWKYQCLCQILLDLSDSNQLTRSFVEEIFFTPLNKC
PDLLVFALIECHGNHGLKETVLIKALLKFICVSHNNPNPNATLIIQKIWPTDFVYTPKTI
LTWAQKSLLTAMVELYTSSSPEEQSYKLSKILDLSQDLKVLNVLLSSNTYSFVIDLACFA
SRREYLKLDKWLNDKITQNGSQFIEACIQFLKKRCAIFGATEPATFSLPNETYRIILNCL
RHHVSDSPKSMIELEIMKMYTRFNQWANPNQFNVNSQQLPTPTTVMKPNQFDSVAGSHLF
GENPVRSPQLANSNANQQQQQPYSPETEEEFTKDIEEEADSYFQRIYNQDQPDSLTIDQF
LDMLKKFQESSLKREKEIAACMIRNLFKEYPFLPQYPDKELVITGEIFGGIILNNFVKGL
TMVNALRCVMDALKRTEASARYFMFGQAALNKLKTRLKEFPQFCNHLCNIPAYRDLPPIL
IEYIEFAKQGMNPPSLAQNHRITLLNNQNKMNQSNDQPPPQQQLEIPPSAFQDKVAFIIN
NLSQMNIVKKADEFKELFLKDKDQYFQWFSHYFIMKRVGLESNYHELYASFMVKVNLSDL
SAKILIETYRNIKVLLRSNKETDNFQDRTLLKNLGNWLGMITLAQNKPILTRNLDLKNLL
IEAFHKGQLQMFFIVPFVTKILMGTSKSKVFRPPCPWTVKLIKILVELHSIPDLKLNLKF
EVEVLCKHLELDINDYVGKSQDLKNKELFMKLEPQLGAAPIPRPNFIANNIGGSVIEPSV
QLHQSSMHSTIDNNLIHPQAVVASAANATGVNQMQNYNEINVNNISNLSQSIIIQPNLQI
IMMNPQHKNFIRNLIEKCVQDWITFVSDRVIKVCMVTTETLVKKDFAHEPNAELMRNAAH
KMMRSLVAGYSLINTQEPLLNRIQMSLLNYFLGNQMKVTKELIDSTIQTLINDNLELCVC
FVQKTCIERAIEELDKRMKPDFEARQKNSADANSKKSSSISMKQLQIYEEMGRNIAGFSS
NQSSSFYSPIDNQSAKAMNYGNVNVLSNVTAAHNNNNYPLIHNEHNAAATLNVNQANQVH
IDAFVVIYDKLIKHLSELIQEFEYVHYTTEAMHQVLEILKVSKQNPRDQGTAVSLIKNVI
NGLRELLLNAETGVTDLAVISRARDFYLILLKALADQRAYNLRFTTLNVTRSVLEHWIAM
NTSFPDDLFDILYRQDLINLNFLDNEFYQILENGSTSFPMVLNFLKYYLNSINSNNFQTT
LDLLQRIVAMKMNQQSPTNTQLIIELKHILSLARININPNQSNNNDMMEGPILETIVKEW
IRFYNSKDINSSFPIVVKTMNAQGVLKNDESISNFFKFFLEFCIERCYQIISYADQHPTF
PLNNIHLKCYEFIDSYSVLVILFIKQSGNQGNLDQKFQFLLRILTILATTAYRDQEIHQK
DFFSLTYYRIILSIFIEFFYSPLNLGFQELVVSNDNLFEVFKFHLVRNYSNFLHQMCPSK
IPSFTFAWLDFISHRIFMEKCLDNSPQINHKTWPLYAALLTDLLLFLKPILQNMDSFIVN
CNMELHKGTLRLFAILSHDFPEFLCEYCYNLCDIIPIRAVQLRNIILSANPINIPDVSNL
KVDNLYEIIPPVRIPSTSLCDQLHYFQKELDSYLLQRNPNNFLIELAQGLSANLLNVEKQ
SSSTTMINALTLYIGISAIQTSKTVTINSIHNSVHLEIFQHLLMNFDSQGRYILINSMVD
HLRYPNNETLLFICLLLTLFKDNNEHIREQIVRVLLERYIAHRPHPWGVEYLINELFRNP
NYKLLEHNFIKCVPEIEKYFTRST
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatcgatatggaattcatcaagcaaacggatcaaaatcaatccgttatgact
tctgggagcggaacagcgaccacctcgtcgtcatgttcgtcatcatcatcgtcattagaa
gagacgtcctatttcatcgaatcaatcaggcattcgaatgttacaccaacactgataaca
gcttatctaatcaaattatgtgattccaaaattaactgtacagaagatttattaatcaaa
tttgccaacattattgttgaaaatttaatctgtgaatcgccactaagtgaaattcttcgt
caattagattcggtggatttttataaaaaattattcaatcatcaacaatttgatttcaac
aaatttctcatcgtttgtcgttatctgtgctcatcggacaaacaaggtttggacatactt
ggcctaacatttttctcaaaagtttggaaaaacaatgctcattttcagcagcaagtcatt
cgttattgtatcgtgtcggactggatacagcagatattgagcaaatgtacgcatcctaca
ttgattaaaaaagtgcctcaaatcgaaaatctgaaatgtcccatggaatatgaaactgat
tgtcaaatatattgttggaaatatcaatgcttatgtcaaatactattggatctttccgat
tccaatcaactaacgcgatcgtttgttgaggagatatttttcacaccactgaataaatgt
cccgatctgctggtatttgcattgatcgagtgtcatggtaatcatggcctcaaagaaacg
gttctcatcaaagctttgttgaaattcatctgtgtcagccacaataatccaaatcccaat
gccacattgatcatacagaaaatttggcccacagatttcgtttatacacccaaaactatt
ctgacatgggcccaaaaatcattacttacagcaatggttgaactttatacatcatcatct
cccgaagaacaatcatataaactttccaagattctcgatctttcgcaagatctgaaagtg
ttaaatgttttgctttcaagtaatacttattcatttgttattgatttggcttgttttgca
tcacgacgcgaatatcttaaacttgacaagtggttaaatgataaaatcacgcaaaatggt
tcacaattcatcgaagcttgcatacaatttttgaaaaaaagatgcgctatatttggtgca
accgaaccggcaacattttctctgcccaatgaaacgtatcgtatcatattgaattgtctt
cgtcatcatgtttccgattcaccaaaatcaatgatcgaattggaaataatgaaaatgtac
acaagattcaaccagtgggctaatcccaatcaattcaacgtcaattctcagcaattacca
acaccaacaaccgtcatgaagcctaatcaatttgattcagttgcaggatctcatttgttt
ggcgaaaatcctgttcgcagtccacagctagccaacagcaatgctaatcaacaacaacaa
caaccttacagtcctgaaacagaagaagaattcacaaaggatattgaggaagaagccgat
tcttattttcaaagaatttacaatcaagatcaaccagattcattaactattgatcaattt
ctggatatgttgaaaaaatttcaggaatcttctttgaaaagagaaaaagaaattgccgct
tgtatgataagaaatttattcaaagaatatccatttttgccacaatatccggataaagaa
ttggtcattactggcgaaatattcggtggtatcattttgaataattttgtcaaaggtctt
actatggtcaatgcattacgttgtgtaatggatgccctcaaacgtaccgaagcatcggct
agatatttcatgttcggccaagccgcattgaataagttgaaaacccgtctaaaagagttt
cctcaattttgtaatcatctttgtaatatacctgcttatcgtgatttaccacccatcttg
atcgaatatattgaattcgctaaacaaggtatgaatccgccatcgttagcacaaaatcat
cgtattacacttttaaacaatcaaaataaaatgaatcaatcgaatgatcaaccaccacca
caacaacaattggaaattccaccaagcgctttccaggataaagttgcattcattattaat
aatctttcccaaatgaatattgtcaaaaaggcggatgagtttaaggaattattcctgaag
gataaagatcaatattttcaatggttttcgcattatttcatcatgaaacgtgttggtttg
gaatccaattatcacgaattatatgcttcattcatggtcaaagtaaatctatctgatttg
tcggcaaaaatcctgattgaaacttatcgcaacatcaaagttttattacggtccaataag
gaaacggataattttcaggatcgaacattactgaaaaatcttggcaattggctgggaatg
ataacattggcacagaataaaccaatcctcactcgaaatttagatttgaaaaatctattg
atcgaagcttttcataaaggtcaactgcaaatgtttttcattgtgccgtttgtgacgaaa
atattgatgggaacatcgaaatcaaaagtttttcgtccgccatgtccatggacagttaaa
ttgatcaaaattttggtcgaattgcatagtattccggatttgaaattgaacctcaaattc
gaggtggaagttttatgcaaacatctggaattggatatcaatgattatgtgggaaaatcg
caagatttaaaaaataaagaattattcatgaaattagaaccacaactcggtgctgcacct
attcctcgacccaatttcattgcgaataatattggtggatcggtaatagaaccaagcgtt
cagttacatcaatcgtccatgcattcaaccattgataataatctaatacatccgcaggca
gttgttgcctcggcagcgaacgcaacaggtgtaaatcagatgcaaaattataacgaaatc
aatgtaaacaatatttccaatctttcacaatcgattattatacaaccaaatctgcagatt
ataatgatgaatccacaacataaaaacttcattcgtaatctgattgaaaaatgtgtgcaa
gattggataacatttgtatcggatcgtgtgatcaaagtttgtatggtaaccaccgaaaca
ttggtgaaaaaagatttcgcccatgaaccgaatgccgaattgatgcgtaatgctgcacat
aaaatgatgcgttccctggttgctggatattcattgatcaacactcaagaaccgttgctt
aatcgaatacaaatgtcactgttgaattattttctgggaaaccagatgaaagttacgaaa
gaattgatcgattcaaccatacaaacattgattaatgataacctggaattgtgtgtttgt
tttgtacagaaaacatgcatcgaacgtgctatcgaagaactggacaaacgaatgaaacca
gatttcgaagctagacaaaaaaattcagccgatgctaatagcaaaaagagttcatcgata
agtatgaagcaactgcaaatctatgaagaaatgggaagaaatattgccggtttcagttcc
aatcaatcatcatcgttctattcgccaatcgataatcaatcggctaaagctatgaattat
ggaaatgttaatgttttatccaatgtaaccgctgcacacaacaacaataattatccattg
attcacaatgaacataatgctgctgcaacattgaacgtgaatcaagcaaatcaagttcat
attgatgcatttgttgtcatttatgataaattaatcaaacatctaagcgaattgattcaa
gaattcgagtatgttcattacacaactgaagcaatgcatcaggtactggaaattctaaaa
gtatccaaacaaaatccccgagatcaaggtacagccgtcagtttgatcaaaaatgttatc
aatggtcttcgggaattgctgttgaatgctgaaactggtgtcaccgacttggctgtcata
tcacgtgccagagatttttatctgatccttctcaaagctcttgccgatcaacgagcctat
aatcttcgctttacaacattgaatgtaacccgttcggtgcttgaacattggatagcaatg
aatacatcgtttccggacgatcttttcgacatactttatcgtcaagatttgataaatctt
aattttctggacaatgaattttatcagatattggaaaatggttcgacaagttttccgatg
gttttgaattttctgaaatattatctgaatagcattaattctaataatttccaaacaaca
ttggatctattgcagcgaattgttgccatgaaaatgaatcaacaaagccccaccaatacc
caactgatcatcgaattgaagcatattctttcgctggctagaatcaatatcaaccccaat
caatccaataataatgatatgatggaaggtcccattcttgaaacaatcgtcaaggaatgg
atacgattctataattcgaaagatatcaacagctcgtttcccattgtggtgaaaactatg
aatgcacagggtgttctcaagaatgatgaatcgatttcaaatttttttaaattttttctc
gaattctgcattgaacgttgttatcaaataatatcgtatgctgatcaacatccaacattt
ccattgaacaacattcatctgaaatgttatgaatttattgattcctattctgtattggtc
atattgttcatcaaacaaagtggtaatcagggaaatttggatcaaaaatttcaattttta
ttgcgtattctgacaatattggctaccacggcttatcgtgatcaggaaattcaccaaaag
gattttttctcgctaacttactatcgaatcattttgtcgatttttatcgaatttttttat
tcgccattgaatcttggctttcaagaattggttgtcagcaatgataacctgtttgaagtt
ttcaaatttcatttggtgcgcaattactccaattttctacatcaaatgtgtccatccaaa
ataccatcattcacatttgcatggttggattttatttcgcatcgaattttcatggaaaaa
tgtttggacaatagcccccagattaatcacaaaacctggccactttatgctgctctattg
actgatttattactttttctcaaaccaatccttcagaatatggattctttcattgtcaat
tgtaatatggagcttcacaagggaacattgagattatttgcaattttgtcgcatgatttc
cccgaatttttatgtgaatattgttataatctgtgcgacattattccaattcgtgctgta
caacttcgaaacattattctcagtgctaatccgatcaatataccggatgtctccaatttg
aaagtagataatctctatgaaatcataccaccggttcgaattcccagcacatcactttgc
gatcaattacattattttcaaaaagaattggatagctatctacttcaacgcaatccgaat
aattttcttattgaattggcacaaggtttaagcgcaaatctattgaatgttgaaaagcaa
tccagttcaacgacaatgatcaatgcattaaccttatatattggtatatcggctattcaa
accagcaaaacggtaacaatcaactcgattcataattctgttcatttggaaatctttcaa
catttactgatgaattttgattcccaaggtcgctatatattgatcaactcgatggtcgat
catttacgttatccaaacaatgaaaccctgttgttcatctgtttgttgttgacattgttc
aaggataataatgagcacattcgtgaacaaatagtgcgtgtattgttggagcgttatatt
gctcatcgaccgcatccatggggtgttgaatatttgataaatgaattgtttcgaaatcct
aattacaaattattggaacataatttcatcaaatgtgtaccagaaattgagaaatatttt
acacgatcaacatag
DBGET
integrated database retrieval system
