Deinococcus puniceus: SU48_03555
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Entry
SU48_03555 CDS
T04339
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dpu
Deinococcus puniceus
Pathway
dpu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SU48_03555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpu03021
]
SU48_03555
03400 DNA repair and recombination proteins [BR:
dpu03400
]
SU48_03555
Enzymes [BR:
dpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SU48_03555
Transcription machinery [BR:
dpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SU48_03555
DNA repair and recombination proteins [BR:
dpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SU48_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ANE43001
UniProt:
A0A172T7M9
LinkDB
All DBs
Position
772567..776013
Genome browser
AA seq
1148 aa
AA seq
DB search
MSFIGKKPRIERFGEITEVIPLPDLTEVQRNSFEAFLQADRAPDARDNVGLQSAFREVFP
IDETEKGRSTGLVLDFLEYRLGDVPYTPEECREKDLTYQAPMYAKLQLIHKDSGLIKEDQ
VFLGDLPLMTADGSFVINGADRVVISQIHRSPGVYFTSSYKGIKKMYTGAIIPMPKRGPW
IELESNGGVLEMKVNKRKFPVAMLLRVLGYDDASLKALFTEFDPNLELPEDKSAGMGADE
AMLRLFTVLRPGDPPKRDKAIQYLYGLLADPRRYDLGEPGRFKMNTKLGVNRPERTLLTF
VDGKFSDAGLVDTIRYLLALQQGLETVKIEEGALEVPVAEDDIDHLGNRRVRTVGELLAD
QLRVGMGRMARGVRERMLLGNPDAATPTKLVNNRPIVAAMREFFGRSQLSQFKDQTNPLS
DLRHKRRISALGPGGLTRERAGFDVRDVHRTHYGRICPIETPEGANIGLISSLSSYAKVN
SLGFIQAPYRKVNHGVVSDEVIYMTADIEDRYVIAQANTALNTDGTFAEERVLARKKGDP
TYYEHEDVDFMDVSPKQIVSINTSLIPFLEHDDANRALMGSNMQSQAVPLVRADSPAVGT
GVETRVVTDSGTSVVSDVTGRVSYVDARVIQVTLSEDSAEAGMVKGNVRTFELVRFTRSN
QGTNLDQHPIVDTGDEVKAGQVIADGPASDLGRLALGQNITIAIMPFDGFNFEDAICINE
GLIRKDFYTSVHIEKDEIEARDTKLGPEKITRDIPGLSEAALRDLDEDGIVRVGAEVKPG
DILVGKTSFKGESEPTPEERLLRSIFGEKAREVKDTSLRVQSGQGGIVVKTVRFRRGDEG
VDLKPGVREMVRVYVAQKRQLQVGDKVANRHGNKGVVSKILPPEDMPYLEDGTPVDLVFN
PLGVPSRMNLGQILETHLGEVARLTGQKFETPVFDSVTEATIKEMLEVAAAERLQVRKDE
GFELDSREQKVLDRAGKTGVINSPNGDYDGAQMQLARTGKSVLYDGRSGEAISGPVVVGT
MYVMKLYHMVEDKLHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQE
MLTIKSDDIDGRDAAYQSIVKGEEVSGSTIPESFKVLVKELHSLGLDVEVLDSYDKNVDI
FEGMMPKR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagttttattggtaagaagccccgcatcgaacgctttggtgaaatcaccgaagtgatc
ccgcttcctgatctcaccgaagtgcagaggaactcttttgaggcgttcctgcaagcagac
cgcgcaccggacgcccgcgacaacgtgggcctgcaaagtgcgttccgcgaagtgttcccc
atcgacgaaaccgaaaaaggccgcagcacgggcctcgttctcgatttcttggaataccgc
ctcggagacgtgccctacacgcccgaagagtgccgcgaaaaagatttgacctatcaggcc
ccgatgtacgccaagctgcaactgatccacaaagacagcggcctgatcaaagaagaccaa
gtcttcctcggcgacctgcccctgatgaccgccgacggctcgttcgtcatcaacggcgca
gaccgcgtggtcatttcgcagattcaccgcagccccggcgtgtacttcaccagctcctac
aagggcatcaagaagatgtacacgggcgcgatcattccgatgcccaagcgcggcccctgg
atcgaactcgaatccaacggcggcgtgctggaaatgaaggtcaacaagcgcaaattcccc
gttgccatgctgctgcgggtgctgggctacgacgacgccagcctgaaggcgctgtttacc
gaatttgaccccaacttggaactgcccgaagacaagagcgcgggcatgggggccgacgag
gccatgctgcgcctgtttaccgtgctgcgtcccggcgatccaccgaagcgcgacaaggcg
attcagtacctctacggcctcttggccgacccccgccgctacgatttgggcgagccgggc
cgcttcaagatgaacaccaagctgggcgtcaaccgtcccgagcgcaccttgctgaccttc
gtggacggcaagttcagcgacgctgggctggtagacaccatccgttatctgctggcgctt
cagcagggcctagagaccgtcaagatcgaagaaggcgcgctggaagtgcctgtggccgaa
gacgacatcgatcacctcggcaaccgccgggtgcggacggtgggcgaactgctggccgac
caactgcgcgtgggcatgggccgcatggcgcgtggtgtgcgcgagcggatgctgctcggc
aaccccgacgccgcgactcccaccaagctggtcaacaaccgtcccatcgtggccgccatg
cgcgagttctttggacgcagccagctgagccagtttaaggatcagaccaacccgctgtcc
gatttgcgccacaagcgccgaatctccgcactggggccaggcgggttgacccgtgaacgc
gcaggcttcgacgtccgcgacgttcaccgcacgcactacgggcgcatctgccccatcgaa
acgccggaaggcgcgaacatcggtctgatctcctcgctgtccagctacgccaaagtgaac
agcctcggctttattcaggctccttaccgcaaggtgaatcacggcgtcgtcagcgacgaa
gtgatctacatgacagccgacatcgaagaccgctacgtgatcgcgcaggccaacaccgcg
ctgaataccgacggcacctttgcagaagagcgtgtgctggcgcgtaagaaaggcgacccg
acctactacgagcatgaagacgtcgatttcatggacgtttcgcccaagcagatcgtgtcc
atcaacacctcgcttattccgttcctagagcacgatgacgccaaccgcgccctcatggga
tcgaacatgcagtctcaggccgtgccgctggtgcgtgccgacagccccgccgtgggcaca
ggcgtggaaacccgcgtggtcaccgactccggaaccagcgtggtcagcgacgtgacgggc
cgcgtgagctacgtggacgcccgcgtgattcaggtcacgctcagcgaggactctgccgaa
gccggaatggtcaagggcaacgtccgtaccttcgaactcgtgcgctttacccgctccaac
caaggcaccaacctcgatcagcaccccatcgtagacacgggcgacgaagtgaaggccgga
caggtcatcgctgacggccccgcctccgatttgggccgcctcgcgctgggccagaacatc
accatcgccatcatgcccttcgacggcttcaacttcgaagacgccatctgcatcaacgag
ggcctcattcgcaaggatttctacacctcggttcacatcgagaaagacgaaatcgaagcc
cgcgataccaagctggggccagagaagatcacccgcgacattccgggattgtctgaggct
gccctgcgcgacctcgacgaagacggcatcgtgcgcgtgggtgccgaagtcaaacccggc
gacattctggtgggcaagacctccttcaagggtgaatccgagcctacccccgaagaacgc
ctcctgcgctccatcttcggtgaaaaagcgcgtgaagtgaaagacacctcgttgcgcgtg
cagtccggtcagggcggcatcgtcgtcaagaccgtgcgcttccgccggggcgacgaaggc
gtcgacctgaagccgggcgtgcgcgagatggtgcgcgtgtacgtggcccagaaacgtcag
ttgcaggtgggcgacaaggtggccaaccgtcacggcaacaagggtgtggtctccaagatt
ctgccccccgaagacatgccctaccttgaagacggcacccccgtcgatctggtgttcaac
ccgctgggcgtgccctcgcgcatgaacctcggccagattctggaaacccacctcggtgaa
gtggcccgtctgaccggccagaagttcgaaacgcccgtattcgactcggtgaccgaagcg
accatcaaggaaatgctggaagtggccgccgccgaacgcctgcaggttcgcaaggatgag
ggcttcgaactcgattcccgcgagcagaaagtgctggatcgtgcgggcaaaaccggcgtc
atcaactcgcccaacggcgattacgacggcgcacagatgcaactggcccgcaccggcaag
agcgtgctgtatgacggacgcagcggcgaagcgatcagcggcccggtcgtggtcggcacc
atgtacgtgatgaagctgtaccacatggtggaagacaagttgcacgcccgctccactggc
ccttacagcctgattacccagcaaccactgggcggcaaggcgcagttcggcggacagcgc
ttcggggaaatggaagtgtgggcgctggaagcttacggcgcggcgcacacccttcaggaa
atgctgaccatcaagtccgacgacatcgacggacgcgacgccgcctaccagagcatcgtg
aagggcgaagaagtgtcgggcagcaccattcccgaatccttcaaagtgctggtcaaagaa
ctccactcgctcggtctggacgtcgaagtgctcgactcctacgacaagaacgtggacatc
tttgaaggcatgatgcccaagcgctga
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