Dryobates pubescens (Downy woodpecker): 104302508
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Entry
104302508 CDS
T08526
Name
(RefSeq) pseudouridine-metabolizing bifunctional protein C1861.05-like
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub00240
Pyrimidine metabolism
dpub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
104302508
Enzymes [BR:
dpub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
104302508
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
104302508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
104302508
NCBI-ProteinID:
XP_009901325
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MIRKIIYTLERHVSTVARGTTQVRRFLHGAYFKIHPSVQEALMDRRAVVALESTIITHGM
AYPQNLSMAREVEKIVATNGAVPATIGILRGQIHVGLTDEELEFLASSKNTVKVSRRDLP
YVLSQGLSGGTTVSGTMIAAHKAGIPVFVTGGIGGVHRGGENTLDVSADLTELGRTPVAV
VSAGVKSILDIGRTLEYLETQGVCVAAFGESREFPAFFSRRSGFQAPYHVQDEEEAAELI
ASALGLGLNSGVLIAVPCPQDRATSGQVIEEAIQQALSEARSKGITGKEVTPFMLQKISE
LTDGKSLDSNLALIQNNARVGSCIAVALSKLQKARRKEDLPQQEDTTPPQPVVIGGINVD
FVAKAQNPAILGGGQTNAGRVRRTFGGVGRNLADCLSRLGQAPLLLSAVGKDEHSESVLH
YCHHMDMSAVLHLEGKSTATYCAVISSAGELSIGLGDMDIHQQITEQYVAQFKEKLCQAP
LVCIDGNVPLSTIQYVCQLAREHQLAVCYEPTDENKASKPFLSDSWKALTYISPNLQELR
AINRTLGNPLPAELPFRLEDVVQTAVALARPLLAHLRCVVVTLGAHGVLLCGQSLGGSIS
LCPGAHKRTAAASLCATHYPAIHISREEIVNVSGAGDSLMAGILAGMLANHDTDTCVRMG
LLAASLSLRSYEPISPEISTATVSQEQVKSRSWPEVKVWKMD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattaggaagatcatttataccctggaaagacacgtgtccactgtggcacgtgggacc
acccaggtgagaagatttctgcatggtgcttatttcaagattcatccctctgtacaggaa
gccctaatggacaggagagccgttgtagctttggaaagcaccatcattacacatggcatg
gcctatcctcagaatctgagcatggccagagaggtggaaaaaattgtagcaacaaatgga
gcagtgccagccactataggtattttaagaggtcaaatccacgtgggactcacagatgag
gaacttgagttcttagcgagcagtaaaaacacagttaaagtgtctcggagagatcttcct
tatgtcctcagccagggcttgtccggtggcactactgtgtctggaacaatgattgctgca
cacaaagcaggaatccctgtgtttgtcacaggtggcataggaggtgtccatcgaggagga
gagaacactctggatgtgagtgctgacttgacagagctgggacgaactccagtcgctgtt
gtgtctgcaggagtcaagtctatccttgatattggcaggacactggagtatctggagact
cagggagtctgcgtggctgcctttggagagtcaagggagttcccagccttcttctcacgc
cgaagtggctttcaagcaccatatcatgtccaggatgaagaggaggcagctgaactcatt
gccagtgctctgggtctaggcctgaacagtggggtgctgatagcagtgccctgtccccag
gatcgagctacctcaggccaggtcattgaagaggccatccagcaagctctcagtgaagcc
aggtccaaagggatcacaggcaaagaagtgaccccctttatgttacagaagatcagtgaa
ttaactgatggaaaatcactggactccaaccttgctttgatccagaacaatgccagagtg
ggcagctgcattgcagtggccctcagcaaactacagaaagccagaaggaaggaggacctg
cctcagcaagaggacacaaccccacctcagccagtggtgattggaggtatcaacgttgac
tttgtagccaaggcacagaaccctgccatcctgggtggtgggcaaacaaacgctggaaga
gtgagacgaacctttggcggcgttggaagaaacttggcagactgcttaagccgtctagga
caggctcctctccttttgtcagctgtggggaaggatgaacattcagagtctgtcctgcac
tactgtcaccatatggacatgagtgctgtccttcacctggaggggaagagcacagccact
tactgtgctgtgatcagcagtgctggggagctcagcatcggcttgggagacatggacatc
caccagcagataacagagcaatacgtggcccagttcaaggagaagctgtgccaggcccca
ctagtttgcattgatggaaatgtgcctctttccactattcagtatgtctgccaactagct
agagaacatcagctggcagtgtgctatgagccgacagatgagaacaaggcctctaagcca
ttcctctcagacagctggaaagcgctcacatacatttcccccaacctgcaagagctaaga
gcaataaaccggacccttgggaaccctttgccagcagagctgccgttcaggttggaggat
gttgtccagactgcagtggccctggcccgtcctttgctggcccacctgcgctgtgtggtg
gtgacacttggtgctcacggcgtgctcctgtgcggccagagcctgggagggagcatctca
ctttgcccaggagcccacaaacggactgctgctgccagcctctgtgccacccactaccct
gccatccacatcagcagggaggagatagtcaacgtctcaggagctggtgacagcttaatg
gcaggaatccttgcagggatgcttgctaaccatgacacagatacctgtgtccggatgggt
ctgcttgctgcaagcttgtctctccgttcctatgagcccatctccccagaaatcagcact
gccactgtcagccaggagcaagtcaaaagcaggagctggccggaggtgaaggtatggaag
atggattag
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