Dryobates pubescens (Downy woodpecker): 104304679
Help
Entry
104304679 CDS
T08526
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104304679 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104304679 (TTC37)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
104304679 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_11
TPR_16
TPR_17
TPR_12
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_9
TPR_7
ANAPC3
HAT_PRP39_N
Arc_MA
TPR_10
ARM_TT21_C
TPR_Slam
Fis1_TPR_C
Sey1_3HB
Retrotran_gag_2
BTAD
TPR_30
Motif
Other DBs
NCBI-GeneID:
104304679
NCBI-ProteinID:
XP_009903748
LinkDB
All DBs
Position
Unknown
AA seq
1537 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKDYKEALKHCKAVLKQEKTNYNAWVFIGLSAAELDQPDQAK
GAYKKAIEYEPNQLLAWQGLANLYEKSNQADVKEDLAEVYQKLLELYKSSDKQKWCDVCN
KLAELYHQEKKCLEVAELWQKLIDMKQEEGAEQAELHQLWKKKIQFLKDSTQDQDNKTEQ
LLLSAFEHALNSAGTVPGEDHQRLYKDFIQCLSKLPHEAARLEKACKDMMALYPAVTYPL
EVLSLHFLQSGTLSEEALDCFSRLLEMDASNGLGIISCGIKCLQEKKYREAIKNLTEGLQ
KTSQCPAAWHYLAEAYMRIHRHRDALQSCNKALQALGTAEGPSLRWKNLVLQLKAEALIK
TADADAAEEAIQALDQIVDASSDPVVLAVRGQAYLKKGLINEASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAEKSFLNAIERKAETAEYHECLGLTYWFMSDETRRDKGKALTQF
LKAAKLDSSLGSAFRYMGNYYRDVAEDKSRARGCYKKAFELDGADEESGTAAVDLSMELD
DMDTALSILNEVTAKAGSGAAKWAFIRRGLYYLRIDQPSKAVPDLQAALRADPKDANCWE
CLGEAYLSRGSYMTALKSFRKASELNPELTYSFYQAAAIEQALGKYQSAIAAYQEILKKT
EDYVPALKGLGECHLILAKSALENYFDRKAVGYIEQALESFTRAAKHRPDVSCVWKLLGD
TCTSVHLISPTTANVQVPASLLGQNEGKEVLKKSELLSLGGRCYSRALKLMHLPSIWCDL
GINYYRQAEHLTAVGTDTSETSELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSIQAERINVAAWTNLGVLYLTTGHIEQAHEAFKTAQSLDPSYLLCWLGQA
LIAERVDSFDTMDLFRHTTELCMHDEGAKGYGHWVCSTLQDKSNRNTEVYQYNIVEMNAI
PTAQVVLTKYTERNPDDASAFTMLGYLDDYLHLKRQAAEAYGRAASLLKNSEDTERYKTA
MQNYGRSLCALGQCDEAIEVYTSIPLTDFDSLVGLALAYFKKGLLQESIRAYEQALSVAE
SEEDKAHVLTAMAIAEYKQNRVDAAQALLFKCSLKEPCVESLKALCTLGLLKKDVTLAAA
ALKELRKHEKGDRRLEDRCLIASALHALQGRNVELQRDICRAIHCQPADPALWALLSQLL
PFHAPRQAKAGAVAGSIAQVLDVNRGKEALLSIAVNQLAAGCLMAEDKKNNPLKNIQKAI
HLSPDSPGAWAVLLAACHAENSTAGLSCAQPPRAALERTLLAAVSAQIAASNLPQNYIQT
LEEWCLCQAVASMQQTGDLSAAEALCTKGLQSRPEHPALLLLLRQVQCKQLLQTHRELPD
NILQELHRTVMSTSTSVAAWQWLAEMYRCQRMMVGAEMCYRKSLQLASQQGSWHGKLSSL
LRLALLALEVCMANVSDDHWPALAQEATAEALKLSPCPLASLLQALLQYQRNMAARDTGR
MLARVLQQPGNAESIVAVARWYLLHHLHAREDPELRQ
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaggaggtgaaggctgccttgaagagcgctagagaagcaatacgaaataaa
gattataaggaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaactaactac
aatgcttgggtgtttattggcctgtcagctgctgagttagaccagcctgatcaggccaaa
ggagcatacaagaaggctattgaatatgaaccaaaccagttactggcatggcagggatta
gcaaatctttatgagaaatccaaccaagcagatgtcaaagaagacctggcagaggtttac
caaaagctcttggaactctacaagagtagtgacaagcagaaatggtgtgatgtatgtaac
aagcttgcagaactctatcatcaagagaagaaatgcttagaggtggctgagttatggcag
aagctcatagatatgaaacaggaggaaggtgcagaacaggcagagcttcatcagctttgg
aagaagaagatccagttcctgaaggacagtacacaggaccaggataataagactgagcag
ttgcttttgtctgcatttgaacatgccctgaactctgctggcactgttcctggtgaggac
caccagcgtctctacaaggactttattcagtgtttgagcaagcttcctcatgaagcagct
aggttggagaaggcctgtaaggatatgatggccttgtatcctgctgtcacctatcctttg
gaagtactttccttgcacttccttcagtcaggtactttgtcagaagaggccctggactgt
ttctccaggcttttggagatggatgcaagcaatggtctaggcatcattagttgtggtatc
aaatgcctgcaagaaaagaaatacagggaggccataaagaatcttactgaaggtctgcag
aagaccagccagtgtccagcagcatggcattatttggcagaggcatacatgagaattcac
aggcacagggatgctctccagtcctgcaataaagctcttcaggctcttggaacggctgag
ggtcctagtcttcggtggaagaaccttgtcctgcagttgaaagcagaggctttgattaaa
acagctgatgctgatgctgcagaagaagccattcaagcactcgatcagattgtggatgca
agcagtgatccagtggttttagctgtcaggggtcaggcttacctaaagaaaggcttaatt
aatgaagcttcaaagatttcacaagagcttcttttgtcccaccctgatctggcggagtcc
catgctctggagggtttcatccattactcccaaaagaactatgaacaggcagaaaaaagt
tttctgaatgctattgaaagaaaggctgaaactgcagagtaccacgagtgcctggggctc
acatactggttcatgagtgatgagacgagaagagacaaaggaaaagcccttactcagttc
ctgaaggctgcaaaattggacagcagcttgggcagtgcctttcgttacatgggcaactac
tacagagatgttgctgaggacaaaagcagagctcgtgggtgctataagaaggcttttgag
ctggatggagctgatgaagagtctggaacagcagctgtagacctaagcatggaactcgat
gacatggacactgctctgtcaatcctgaatgaggtgactgcaaaagcaggcagtggtgca
gccaaatgggccttcattcgtcgtgggctgtactacctgagaattgatcagccatccaaa
gcagtgcctgatttgcaggcagcgctcagggctgatccaaaagatgccaactgttgggag
tgcctaggggaggcttacttgagcagaggcagctacatgacagctctgaaatccttcagg
aaagccagtgagctgaacccagagctcacatacagcttttaccaagctgctgcaattgag
caggccctaggcaaatatcagagtgctatagctgcctatcaagagatcctgaagaagaca
gaagattatgtgcctgcactgaaaggacttggtgagtgccatctcatcctggcaaagtca
gccctggagaactattttgataggaaggctgtgggttacatagagcaagctcttgaatca
tttaccagagcagccaagcaccgtcctgatgtatcttgtgtctggaaactgcttggagat
acctgcacaagtgtgcatctcatctcgccaaccacagccaatgtccaagtcccagcatcc
cttctgggtcaaaatgaaggcaaagaggtgctgaagaaaagtgagctgctcagtctggga
ggaaggtgttacagcagagccctgaagctgatgcatttgcccagcatttggtgtgacttg
gggataaattactatcgacaggcagagcacctcacagcagtgggcactgacaccagcgag
accagcgagctgctggagaagtccttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaaccatctgtattggaatgcacttggtgtagttgcttcctgtagtgctattgggaat
tatgctctggctcagcattccttcatcaaatcgatccaagctgagcgaatcaatgttgct
gcctggaccaacttgggggttctatatctgacgacaggacacattgagcaagctcacgaa
gccttcaagacagcccagtctctggacccttcctacttactgtgttggcttggacaggct
ctcattgcagagagagtggacagctttgacaccatggatctcttcaggcacaccactgaa
ctctgcatgcatgatgagggagcaaaaggctatggccactgggtgtgctcgacactgcag
gacaaaagcaacagaaacactgaggtgtatcagtacaacattgttgagatgaatgctatc
ccaacagcacaggtggtcttgaccaaatacacagagagaaacccagatgatgcctctgct
ttcacaatgcttgggtatttggatgattatctgcatctgaagaggcaggcagcagaagcc
tatggcagggcagcttccctgctgaaaaactctgaggacactgagagatacaagacagca
atgcaaaactatggcaggtccctgtgtgccctgggccagtgtgatgaggccattgaggtt
tacacatccatacccctcactgactttgatagccttgtggggttagccttggcctacttc
aagaagggtctgctacaagagagcatcagagcctatgaacaggccctgtctgttgctgag
tctgaggaggacaaagctcatgtcctgactgccatggccatagcagagtacaagcagaac
agagtggatgctgcacaggcactgctgttcaaatgctctttgaaggaaccctgtgtggaa
agtctgaaggctctgtgcacactgggcctgctgaagaaggatgtcaccctggcggcagca
gccctgaaggaactcaggaagcatgagaaaggggaccggagactggaggacaggtgtctc
atagcctctgctctccatgctctgcagggcaggaatgtggagctgcagagagacatctgc
agagcaatacactgccaacctgcagatcctgccctctgggctctgctgtctcagctgctt
cccttccatgccccacggcaggctaaggcaggagctgtggcaggaagcattgcccaagtg
cttgatgtaaaccgtggaaaggaggccctgctgagcattgcagtgaaccagctggctgca
ggctgtctcatggcagaagataagaagaacaaccctctgaagaacatccaaaaggccata
cacctctctccagatagccctggtgcctgggcagtgctgctggcagcctgccatgctgag
aactccactgctggcctaagctgtgcccagccgccacgcgctgccctggagaggactctg
ctggctgcagtttcagcccaaattgcagcaagcaaccttccacagaattacatccagact
cttgaagagtggtgtctgtgccaagctgttgccagtatgcagcagactggagacctctca
gcagctgaagctctgtgtaccaagggtttgcaaagccgccctgagcacccagctctgctt
ctgcttttgaggcaagttcagtgcaaacagctactgcagactcacagggagcttccagac
aacatcctgcaggagctccacaggacagtcatgagcacttcaacttcagttgcagcctgg
caatggctggcagagatgtatcggtgccaaaggatgatggttggagcagaaatgtgctac
aggaagagtctgcagctggcatcccagcagggcagctggcacgggaagctgtccagcctt
ctcaggctggccttgctagccctggaagtctgcatggctaatgtctcagatgaccactgg
ccagccctggctcaggaggcaacagctgaggctctgaagctctctccttgccccctggca
tctctcctgcaggcactgctgcagtatcagcgcaacatggcagcaagggacaccggtcgg
atgctggccagagtgcttcagcagccagggaatgcagagagcattgtggccgtggctcgc
tggtacctgctgcaccacctgcatgccagagaggatcctgagctcagacag
DBGET
integrated database retrieval system
