Dryobates pubescens (Downy woodpecker): 104308097
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Entry
104308097 CDS
T08526
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104308097 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104308097 (XPC)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104308097 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
104308097
NCBI-ProteinID:
XP_009907531
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
METTADDFEEKKPGKKENDSKALGRKKEEDSNSANKPPKQKGANSLVKENKKNTRNKGDH
NKEETCSDLLKLPQKEVKLKRESTVKKEADEDNDDEEDDDDESEDEWEDVEELQEPVTDK
LEAAAFPAEVLPSNPVEIEIETPEQVKKRERSEKMRSEFEIYLRRIRKRFSKEVREDTHK
VHLLCLLANGFYRNRICNQPDLHAIGLSVIPIHFTKVTAGQVDLLYLSNLVKWFVGTFTV
NDELSTEKGEPLQSTLERRFAIYAARDDEELVHILLIVLRALQLLCRLVLSFQPVPLKET
KAKGKISSKRQSLSSTSEGQKSSASTPKAVAKKCPCRKDEDEKSSESKEDKGPEKPKSAQ
TRKSKLITSSQEEKESNTEEGILAGKDVPGRPKNDRRRRVASKVCYKEESGSDEGSVSEF
EVSEEESNLSDEDFETVSKRRRSSMGSQNSKLTTVKKPKAKTSESRLSKNPCGTEPKPAK
SRAPALPHGQRKRNKIISSDEDDGEQEVRKVMGTDQWLEVFLEREDKWVCVDCVRGSVGQ
PQQCFKYATKPLSYIVGFDNDGSVRDVTQRYDPVWMTATRKSRVDPEWWEDTLQPYKSPY
VERDRKEENEFQVKLQDQPLPTAIGEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEA
VYSRDCVHTLHSRDTWLKQARVVRIGEVPYKMVKGFSNQARKARLAEPANRDKEDLALFG
HWQTEEYQPPVAVDGKVPRNEYGNVYLFLPSMLPIGCVQLRLPNLNRLARKLDIDCAQAI
TGFDFHGGYSHPVTDGYVVCEEYKEILIAAWENEQAEIEKKEKEKREKRALGNWKLLTKG
LLIRERLKQRYSIKTEPFAPQTEKGEGFSSDEGGPSSETAVGSTAISWPQNRQLEKKNEE
KTTRKSKREKKGEEAQLFPFEKL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacagcggatgactttgaagagaagaagcctggtaaaaaggagaatgactca
aaagccctaggtaggaagaaggaagaagattccaactcagcaaataagccaccaaaacaa
aaaggggcaaattctctagtaaaagaaaacaaaaaaaatactagaaataaaggggaccat
aacaaagaggaaacatgcagtgacttgctgaagctgccacaaaaagaggtgaagttgaaa
agagaatctactgttaaaaaagaggcagatgaagacaatgatgatgaagaagatgatgat
gatgaaagtgaagatgaatgggaggatgtggaagaactccaggaacctgtcacagataag
ttagaagctgctgcttttccagcggaggtgctgccaagcaatccagttgagatagagatt
gaaacccctgagcaggtcaagaaaagagagaggagtgaaaaaatgagatctgagtttgag
atatatcttcggagaataaggaaacgtttcagcaaggaggttcgtgaggacacccataag
gttcacctcttgtgtttattagcaaacggtttctatagaaacaggatctgcaaccagcca
gatcttcatgccattggtctatctgtcatccctatccacttcacaaaagtgactgcaggc
caagtcgaccttctctacctttccaacttggtaaaatggtttgttggaaccttcactgtc
aatgatgagctttccactgaaaaaggagagccccttcagtcaaccttggagcggcgcttt
gccatctatgctgcacgagatgatgaagagttggttcacatacttctaattgttctgaga
gcattgcagctcctgtgtcgcctcgtgctgtcttttcagccagttcctctcaaggagaca
aaagcaaaggggaaaatctcatccaagaggcagtctctcagcagtacctctgaggggcag
aagagctctgcctcaacacccaaagctgtggcaaaaaaatgtccctgcagaaaagacgag
gatgagaaatcctcagagagcaaagaagacaaaggaccagagaaacccaaaagtgctcag
acacgcaagtcaaagttgattacaagcagccaggaagagaaagaatctaatactgaggag
ggcattttagcaggaaaagatgtgccaggcaggcctaaaaatgatcgccggagacgagtt
gcctccaaagtgtgttacaaagaagaaagtggaagcgatgagggcagtgtttcggagttt
gaggtttcagaggaggagagcaatctctctgatgaggactttgaaactgtctctaaaagg
cggaggagctcaatgggctcccagaactcaaagctaacaactgtaaaaaaaccaaaggcc
aagacttcagaatcaaggctgtccaaaaatccatgtggcactgaacctaagccagcaaaa
agtagagctccagccttgcctcatgggcagagaaagagaaacaaaataatttctagtgat
gaggatgatggagagcaagaggtaaggaaagtgatgggcacagaccagtggctggaggtt
ttccttgaacgtgaggacaagtgggtgtgtgtagactgtgtccgtggtagcgttggccag
ccccagcagtgcttcaagtatgccacaaagcctctttcctacattgtgggatttgataat
gatgggagtgtcagggatgtgacccaaagatacgacccagtgtggatgactgcaacaagg
aagagccgtgtggaccctgagtggtgggaagacacactgcagccatataagagtccttat
gtggaaagagacaggaaggaggaaaatgagtttcaagttaagcttcaagatcagcctctg
ccaacagcgattggagagtacaaaaaccaccctctttatgcactgaagaggcacctcttg
aagtatcaggcgatctatcctgagtcagctgctatcctagggtactgcaggggagaggct
gtctactccagagactgtgtacatacgctgcactccagggacacttggctgaagcaagct
cgagtggtgaggattggagaagtgccttacaagatggtgaaaggattttccaaccaggca
aggaaggcacgccttgcagagcctgcaaaccgagacaaagaggacctggcactgtttggt
cactggcagacagaggagtatcagccgcctgtagcagtggatgggaaggttcctcggaat
gaatatggaaatgtctatctcttcctaccatccatgttacccattggctgtgtgcagctg
agactcccaaatctgaacagattggcacggaagttggacattgactgtgctcaagccatc
actggatttgattttcatggtggctactcacaccctgttactgatggctatgttgtctgt
gaggagtataaagagatcctcattgctgcctgggagaatgaacaagcagaaatagagaag
aaagagaaggagaagcgtgagaaaagagctctggggaactggaagctgctgacaaaagga
cttcttatccgagagagactgaagcaacgttattccatcaagactgaaccattcgcaccc
cagacagagaaaggagagggtttctcttcagatgaaggaggtccaagttcagagactgca
gtagggagcacagccatttcttggccccaaaatcgccagttagagaaaaaaaatgaggag
aagacaacgcgaaagagcaagcgagagaagaaaggagaggaagcacagttattccctttt
gagaaactgtga
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