Dryobates pubescens (Downy woodpecker): 104308907
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Entry
104308907 CDS
T08526
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104308907 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104308907 (TRIP13)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
104308907 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
AAA_14
Viral_helicase1
AAA_18
AAA_5
Cytidylate_kin
IstB_IS21
RuvB_N
NPHP3_N
AAA_28
AAA_24
TsaE
AAA_25
bpMoxR
TIP49
AAA_30
NACHT
RNA_helicase
ATPase_2
AAA_33
DUF815
AAA_7
AAA_11
AAA_17
ABC_tran
PduV-EutP
Zot
Rad17
Mg_chelatase
AAA_19
SLFN-g3_helicase
AAA_3
NB-ARC
PhoH
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
104308907
NCBI-ProteinID:
XP_009908452
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MDKAAGDLKQALPNVCENVQIHVEIHQKSTSVAKTEDIRMSVLKLLNRHNIVFGDYKWTE
FDDGFLNSNVQSVSIVDTDLKLKDRQPIDLSKSNLSLHIFHLNEEGPSSENLEEENEDII
AANHWVLPAAEFHGLWESLIYDTEVKSDLLDYVTTTLLFSDKNVDSNLVSWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLFSKWFSESGKLVTKMFRKIQELI
DDKDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FVENNVSRLSLVLKEISRRSAGLSGRVLRKLPFLAHALYIQSPSVTMTAFLQALSLAVDK
QFEERRKLADCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggataaagctgctggggatttgaagcaagccctcccaaacgtgtgtgaaaatgttcag
atacatgtggaaattcatcagaaatcaaccagtgtggccaagacagaagatatcaggatg
agtgtgttaaagctgttgaacagacataacattgtgtttggtgattacaagtggacagaa
ttcgatgatggtttccttaacagcaatgtgcagtccgtgtcgattgtggatacagacctg
aaactaaaagacagacagcctattgacttgagcaaaagcaatctttctcttcatattttt
catctaaatgaagaaggaccaagctctgaaaacctggaagaagagaatgaggatatcatt
gcagctaaccactgggtgctaccagcagctgaatttcatggcctttgggaaagtcttata
tatgacactgaagtaaaatcagatttgcttgattatgtgacgaccacattactattttct
gacaaaaacgttgacagcaacctggtatcatggaacagagttgttttgctgcatggccct
cctggaactggtaaaacctctctctgcaaagcattggctcagaagctgacaattcgattg
tcgtacaggtacaggtatgggcaattaattgagataaacagccatagccttttctctaaa
tggttttctgagagcggcaagcttgtaaccaagatgttccggaagattcaagagttaatt
gatgacaaagatgctcttgtgtttgtactgattgatgaggtagaaagcctcacagcagct
cgcagtgccttcaaggcaggcacagaaccttcagatgctattcgtgtagtgaatgctgtg
ctgacacaaatagatcagattaaaaggtatcccaatgtagttatcctgaccacttcaaat
attacggagaaaattgacatggcctttgtagacagggctgacataaagcaatacattgga
cctccatctactgcagcaatatttagaatttatctttcttgcttggaagaactgatgaag
tgtcaaataatatatcctcgacagcagctgttgactctcagagagctagagatgataggc
tttgtcgaaaataatgtgtcacggttaagccttgtactaaaagaaatctcaagaagaagt
gcaggtcttagtggccgggtcctgaggaaacttcctttcctagcacacgcactttatatt
cagtctcccagtgtcacaatgacagcgtttcttcaggctctttcacttgccgtagacaaa
caattcgaagaaagaaggaaacttgcagactgtgtgtga
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