Devosia polycyclovorans: ACE4RL_11075
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Entry
ACE4RL_11075 CDS
T11232
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dpv Devosia polycyclovorans
Pathway
dpv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACE4RL_11075 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpv03021
]
ACE4RL_11075 (rpoB)
03400 DNA repair and recombination proteins [BR:
dpv03400
]
ACE4RL_11075 (rpoB)
Enzymes [BR:
dpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACE4RL_11075 (rpoB)
Transcription machinery [BR:
dpv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACE4RL_11075 (rpoB)
DNA repair and recombination proteins [BR:
dpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACE4RL_11075 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
KorB
Motif
Other DBs
NCBI-ProteinID:
XHD26190
LinkDB
All DBs
Position
2211587..2215726
Genome browser
AA seq
1379 aa
AA seq
DB search
MATTFNGRRKVRKSFGSIREVTELPNLIEVQKASYDQFLQVDEPKGGRPEEGLQSVFRSV
FPITDFSNTASLEFVRYEFEQPKYDIDECRARDMTFAAPLKVTLRLIVFEVDEETGARSV
KDIKEQDVYMGDMPFMTPNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAG
RIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLKALGMDAEEILDTYYSKLHYEKTE
KGWRVPYDAEKWKGAKPTHDLIDAKTGDVVHEGGKKLSARQAKKLAENGLTHLLAVDEDL
YGMYVAEDLVNLQTGEIYAEAGDELDEKLLTTLVDKGFDELPILDIDHISIGAYLRNTLA
IDKNETREDALFDIYRVMRPGEPPTVETAEAMFQSLFFDAERYDLSAVGRVKMNMRLELD
APDTMRTLRKEDIVEVVRTLVDLRDGRGEIDDIDNLGNRRVRSVGELMENSYRLGLLRME
RAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVAHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINNLATYARVNKYGFIETPYR
KIVDGKLTNEVVYLSAMEEAKHYVAQANVQFNADGTLKDDLVVARHAGDNGLTPKENVDL
MDVSPKQMVSVAASLIPFLENDDANRALMGSNMQKQAVPLLRAEAPFVGTGMEPVVARDS
GAAIVAKRTGIVDQVDATRIVIRATAETDASKSGVDIYNLMKFQRSNQSTSINQRPLVVV
GDHINAGDIIADGPSTELGDLALGRNVLVAFMPWNGYNFEDSILLSEKIAMQDVFTSIHI
EEYEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVHIGAEVQPGDILVGKITPKGES
PMTPEEKLLRAIFGEKASDVRDTSLRVPPGDAGTVVEVRVFNRHGIDKDERAMAIEREEI
ERLAKDRDDEQSILDRNVYARLKEMLFGKAATAGPKGYVVGTKLNDSIFEGQPRSKWWQF
AVEDDKVMTEMEALHAQYEESRRLLEQRFIDKVDKLQRGDELPPGVMKMVKVFIATKRKI
QPGDKMAGRHGNKGVVSRIVPVEDMPYLEDGTSVDIVLNPLGVPSRMNVGQILETHLGWA
CAGMGRKIDEMVRAYHAKGDLTPLRAEINTLFANDDTLNDLDDDSLVRLGEHLSKGVPIA
TPVFDGAKEADIVVMLEQAGLKASGQSTVYDGRTGEQFDRQVTVGYIYMLKLDHLVDNKI
HARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTIKSDDVAGRTK
VYEAIVRGDDTFEAGIPESFNVLVKEIRSLGLNVELDMREDEEPEQQDPELAPPQEAAE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacgttcaacggccgccgcaaggttcgcaagtccttcggctccatccgcgaa
gtcacggagttgcccaatctgatcgaagtccagaaggcttcctatgatcagtttcttcag
gtcgacgagcccaagggcggacgtcctgaggaagggttgcagtccgtgttccgctcggtg
ttccccatcaccgacttctcgaacaccgcctcgctcgaattcgtgcgctacgagttcgaa
cagccaaagtacgacattgatgagtgccgtgcgcgcgacatgaccttcgctgccccgctc
aaggtgacgctgcggctgatcgtgttcgaagtggacgaagaaaccggtgcgcgttcggtc
aaggacatcaaggagcaggacgtctatatgggcgacatgcccttcatgacgcccaacggc
acctttgtcgtcaatggcactgagcgcgttatcgtttcgcagatgcaccgttcgcccggc
gtgttcttcgaccacgacaagggcaagacccactcttcgggcaagctgctgtttgctggc
cgtatcattccctatcgcggttcctggctcgatatcgagttcgacgccaaggacatcgtc
tatgcgcgtatcgaccgtcgccgcaagattccggtcacttcgctgctcaaggcgctgggc
atggatgccgaggaaatcctcgacacctattacagcaagctgcattacgagaagaccgag
aagggctggcgcgtcccctacgacgccgagaagtggaaaggcgccaagccgacccatgac
ctgatcgatgccaagactggcgacgtggtgcatgagggcggcaagaagctctcggcccgc
caggccaagaagctggctgagaacggcctgacccatctactggctgtcgatgaagacctc
tatggcatgtatgtcgccgaggatctggtgaatctccagaccggtgagatctatgccgag
gccggcgacgagctggacgaaaagctgttgaccactctggtggacaagggttttgacgag
ctgccgatcctggacatcgatcacatctcgattggtgcctatctgcgcaacacgctggcg
atcgacaagaacgagacgcgtgaagacgcgctgttcgacatctatcgcgtgatgcgtccc
ggcgagccgccgaccgtggaaaccgctgaggcgatgttccagtcgctgttcttcgatgcc
gagcgctacgacctttcggccgtcggtcgcgtcaagatgaacatgcgtcttgagctcgat
gctcccgacaccatgcgcaccctgcgcaaggaagacattgttgaagtcgtccggaccctg
gtcgacctgcgcgatggccgcggcgaaatcgacgatatcgacaatttgggtaaccgccgc
gtccgttcggtcggtgaactcatggagaactcataccgccttggtctgctccgcatggag
cgtgccatcaaggagcgcatgagctcggtcgaaatcgacaccgtcatgccgcaggacttg
atcaacgccaagccggctgccgccgcggtgcgtgaattcttcggttcctcgcagctgagc
cagttcatggaccagaccaacccgctctcggaagtcgcgcataagcgtcgtctttccgcg
cttgggccgggtggtcttacccgtgagcgtgccggtttcgaagtgcgcgacgttcatccg
acccactacggccgtatctgcccgattgagacgccggaaggccccaatatcggtctgatc
aacaatctggccacctatgcgcgcgtcaacaagtacggcttcatcgaaaccccgtaccgc
aagatcgtcgacggcaagctgaccaatgaagtggtttacctctccgccatggaagaggcg
aagcactatgtcgctcaggcaaacgtgcagtttaacgctgacgggaccctgaaggacgat
ctggttgtggctcgccacgctggcgacaacggcctgacgcccaaggaaaacgtcgatctg
atggacgtttctcccaagcagatggtctcggttgcggcttccctgatcccgttccttgaa
aacgacgacgccaaccgcgccctgatgggctcgaacatgcagaagcaggctgtgccgctg
ctgcgtgccgaggcccccttcgtgggtaccggcatggagcccgtcgtggcccgtgactcg
ggcgctgcgatcgtggccaagcggaccggtatcgtggaccaggtggatgcgacccgtatc
gttattcgtgcgacggccgaaaccgatgcgtcgaagtcgggcgtcgatatctacaacctg
atgaagttccagcgttcgaaccagtcgacctcgatcaaccagcgcccgctggtggtggtg
ggcgaccatatcaatgctggtgacatcattgccgacggtccttcgaccgaactgggcgat
ctggccctgggccggaacgtgctcgtcgcgttcatgccctggaatggctacaacttcgaa
gactccatcctcctgagcgaaaagatcgccatgcaggacgtcttcacctcgatccatatc
gaggaatatgaagtgatggctcgcgacaccaagcttggtccggaagaaatcacccgcgat
attcccaacgtctcggaagaagcgctgaagaacctggacgaagccggtattgtgcatatc
ggcgccgaagtgcagccgggcgacatcctcgttggcaagatcacccccaagggtgaatcg
ccgatgacgccggaagaaaagctcctgcgcgccatcttcggtgagaaggcctctgacgtt
cgcgacacctcgctgcgcgtgcccccgggcgatgccggtaccgtcgtggaagtccgtgtc
ttcaaccgtcatggcatcgacaaggacgagcgtgccatggccatcgagcgcgaggagatc
gagcgcctggccaaggaccgcgacgacgagcagtcgatcctcgaccgcaacgtctatgcg
cgcctcaaggaaatgctgttcggcaaggccgcaacggccggtccgaagggctatgttgtt
ggcaccaagctcaatgactcgatctttgaaggtcagccccgttcgaagtggtggcagttt
gccgtcgaggacgacaaggtcatgaccgagatggaagctcttcatgcgcagtatgaagag
agccgtcgtctgctcgagcagcgcttcatcgacaaggtcgacaagctgcagcgcggtgat
gaacttccgccgggcgtgatgaagatggtcaaggtcttcattgctaccaagcgcaagatc
cagccgggcgacaagatggccggtcgccatggtaacaagggcgtggtctcgcgcattgtt
ccagtcgaggacatgccgtatctcgaagacggcacttcggtcgatatcgtgctcaacccg
ctcggtgtgccctcgcgcatgaatgtgggccagatcctggaaacccatctgggttgggcc
tgtgccggcatgggtcgcaagatcgacgagatggttcgcgcctatcacgccaagggtgac
ctgaccccgctgcgcgctgagatcaacacgctgttcgccaatgacgacacgctcaatgat
ctcgacgacgacagtctggttcgcctgggtgaacacctttccaagggcgtgccgattgcg
accccggtgtttgatggcgccaaggaagccgacatcgtcgtgatgctggagcaggcgggt
ctgaaggcctcgggtcagtcgaccgtctatgacggccgtaccggcgagcagttcgaccgt
caggtgaccgtgggctacatttacatgctcaagctcgaccacctggtggacaacaagatt
cacgcgcggtcgatcggtccgtactcgctcgtcacccagcagccgctgggcggcaaggcg
cagtttggtggtcagcgcttcggcgagatggaagtgtgggccctcgaagcgtatggcgct
gcctatacgctgcaggaaatgctcaccatcaagtcggacgacgtggcgggtcgtacaaag
gtctacgaggccatcgtgcgtggcgacgacaccttcgaagcgggcatcccggaaagcttc
aacgttctggtcaaggaaatccggtctctcggtctcaatgtcgaactcgacatgcgtgag
gacgaggaaccagaacagcaagatccggagctcgcacctcctcaggaagcggcggaataa
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