KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_200903
Entry
DAPPUDRAFT_200903 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
dpx  Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dpx04121]
    DAPPUDRAFT_200903
Ubiquitin system [BR:dpx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     DAPPUDRAFT_200903
SSDB
Motif
Pfam: WD40 Bromodomain WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_SCAP Ge1_WD40 Beta-prop_Nup120_160 HTH_63 Beta-prop_NWD2_C
Other DBs
NCBI-ProteinID: EFX72674
JGI: Dappu1_200903
UniProt: E9H6J7
LinkDB
Position
Unknown
AA seq 1357 aa
MHGLLPKRIDWLGNEHDQTYAQVCQSFSHVGPNHLLELCRRLGPLVDKEVPTNVQGVHSL
LGAGRQSILRRKEDIIRKLHREHYVVRQNKRPRLFPHDIAHPPNNVPLLLGREFTGAIDT
QSATPAKLYSRVQLFCRTLGHLSAVYCVLFDRTGQYIFTGADDLLIKIWSVVTGRLLATL
RGASAEIADIAVSCDNTLLAAGSCDKIVRVWCLRTTAPIAVLTGHGGTITSINFCPADRG
SVRYLASTSSDGSVSFWEYVTEPGQTPKFFPRPHKFNEKIRPGQAQMLCASFSPGGSFMA
TGCADHHVRVYAMFGQEGPERILEQEAHSDRVDSIQWANTGLRFISGSKDGSALIWRYEK
QEWRTVRLRMSCRLEGASTATAEELSQKLKVTMVTWSRDDRYLITAVSDFSIKIWDSSTG
ILHKELRGHEGEAFVLEPHPFDPNVLLSAGHDGRLLIWDMAKGEVMKSFLNFIDGQGHGA
VFDAKWNPSGSTIAATDSHGHLSIYGIGPSESFKKLPKAIFFHTDYRPLIRDAHHHVLDE
QTQLAPHLMPPPFLVDSEGNPYPPNMQRLVPGRENLKDDQLVPTVVVNANGEQEIVAGVE
RTRSNIDQMIAELAQQQERQRNRPRSSTTAAVAAASAAVPSTSTAPPNSDHSYTSRTPHT
AHSRPLLVASGSGNSPRASVTPEPESGEAADDVPEDGDTVNLSTEATASESLPGFSRRHN
YRTRANRTTNGTRERVREGASDGTRERSRRVVRRVVSTDEDEQVDVEVEERRSSRRTSPR
DNDTGDEEETQTRGSSSSSSSEYSDWTAEAGVNLEPPKRTRKKPANEAEEGEGSQPGPKK
RRGPIPKAGSGGLDRIPESFRPSEWLSSVVPRRQPFYPQMGDEVIYFRQGLFFYYVDAIN
QKKLFELNPRSLPWSSQTIREQELVKIIGIKYEIKPPRLCCLKLGLMDPATGVLTGESFI
LKYHDVADVLDFLVLKQNYDLAIQRNWQPGDRFRSIIDDLWWEGQLETREPYQAQCPDSM
FLCYRIRWDNDEVDRVSPWDLEKIDLERRPTGPGTGVPVIPSEIAMTLYQPRAEDWPPGG
DRDSECDRISAGLSQVMGLAIAEPFVAPVDLNLYPSYAYVVEYPMDLSTIKARLENRFYR
RVTAVQYDVRYVYTNACKFNEPKSDIVRSASIISDLCLEIIRNRDSVDATALYHQLVEKY
KIRDEGADENAAGAGPSKSGVSTKRNGSAPNTPNTPAALSWKQQCKDLIDTLCQSEDAGP
FREPVSILDVPDYLQVIDHPMDLGTVREQLQVSNYATPMDFAKDVRLIFENSKKYNTLKK
SRIFAMTVRLSASFEEHIRGILASYKHRKSSDSKSRC
NT seq 4074 nt   +upstreamnt  +downstreamnt
atgcatgggttgttaccgaaaaggatcgattggctcgggaatgaacacgatcaaacttat
gcccaagtgtgccaaagtttctcacatgttggtcccaaccacttgttggaattgtgtagg
cgattaggtcccttggtagacaaagaagtgccgaccaatgtccaaggtgttcactcatta
ttgggcgccgggcgacagtcaatcctccgtcgcaaagaggatatcatcaggaagctccat
cgcgagcattatgttgttcgtcagaacaaaagaccacggttgtttccgcatgacatcgcc
cacccacctaataatgtgcccttgttgttgggtcgtgagtttacgggagcaattgacaca
cagagtgcaacacccgctaaactttatagccgtgttcaactgttttgccgcactctcggc
cacctttcagctgtctattgcgtcctttttgatcggaccggccaatatatttttacggga
gctgatgatttattgatcaaaatttggagtgttgttacgggtcgcttgttagctacttta
cgcggtgcctcagctgagattgccgatatcgctgtcagttgcgacaacacgctactggct
gccggatcgtgtgacaaaattgtccgcgtgtggtgtcttcgcactactgcacctattgca
gtgttgactggtcatggaggtacaatcacttccatcaacttttgtcccgccgatagaggt
tccgtccgttacctggcttcgactagttccgacggctccgtctccttctgggaatatgtc
acagaaccaggacagacaccgaaattctttccacgaccacacaagttcaatgagaagatt
cgacctggtcaggctcagatgttgtgcgcttcttttagccctggtggatcgtttatggct
acaggttgtgcagatcaccacgtcagggtgtacgcaatgtttggacaagaaggtcccgag
cgtattcttgagcaggaagctcactcggatcgagtagattccatccagtgggccaacaca
ggtctgcgcttcatttcgggaagcaaggacggctcagctttgatctggcgttacgagaaa
caagagtggcgaaccgtccggttacggatgagctgccgacttgaaggagccagcactgca
acagccgaagaactgagccagaaacttaaagtgacaatggttacgtggagccgcgatgat
cgttacctcattacagccgtcagtgacttttccatcaaaatttgggattcctctactgga
attttgcataaagagctgagaggacacgaaggcgaggcgtttgttttggaacctcatcca
ttcgatcccaacgtgcttttgagtgccgggcatgatggtcgcttattgatttgggatatg
gctaaaggcgaagtgatgaaatcattcttgaactttatcgatgggcaaggacatggggca
gtttttgacgctaaatggaatccgtctggttcaactattgcagctacagactcgcatggt
catttgtcaatctacggcatcggacccagtgaatcgttcaaaaaattgcctaaagccatc
ttcttccacacggactaccgaccattgattcgcgatgcccatcaccatgtactggatgag
caaacgcaattggcgcctcacctgatgcctcctcctttcctggttgatagcgaaggcaat
ccttatcctcccaacatgcaacggttggtgcctggtcgtgaaaatctcaaggatgatcag
ctggtccctactgtggtggtcaatgcaaacggggagcaagaaattgtagctggtgtggaa
cgcactcgttccaatatcgatcaaatgattgctgagctggcccagcaacaagagagacaa
cgaaaccgacctcgctcatctacaacggctgcagtggctgcagcatcggctgccgtccct
tcaacttccaccgctccgccaaacagtgatcactcttacacatctcgtacacctcatacc
gcccacagccgcccattactggttgcttccggcagtggcaactctcctagagcctccgtt
acacctgaaccagagtcgggtgaggctgccgacgatgttcctgaagatggtgacactgta
aacctctcaactgaagctactgcatcggaatccttgcctggtttcagccgacgccacaac
tacaggaccagagctaatcgaacaaccaacggaaccagagaacgtgtcagggaaggtgcc
agtgacggaactagggaaagaagccggcgcgtcgtacgaagagttgtgtcgactgatgaa
gacgaacaggtggacgtcgaagttgaagagagaagaagcagccgtcgcacttcaccaagg
gataacgacaccggggacgaggaagaaactcaaactcgaggatcatcatcttcgtcgtct
tctgaatattccgattggacggccgaagcaggagtgaatttggagccgcctaagcggacc
agaaagaaaccggccaatgaagcagaagaaggtgaaggaagtcaacccggaccgaagaag
agacgtggtccaattcctaaagccggttctggtggtttagatcgcattcccgagagcttt
cgcccatctgagtggctatcttctgtggttcctcgcagacaacctttttatccccaaatg
ggtgatgaagttatttactttagacaaggtttgttcttctactacgtggatgccatcaat
cagaagaaactctttgaactcaatcctcgttcacttccctggtccagtcagactattcgt
gaacaagagttggttaagatcattggtatcaagtacgaaatcaaacctccaaggctttgt
tgcttgaagcttggattaatggatccggctaccggggttctaactggcgaatcgttcatt
ctgaaatatcatgacgtcgcagacgttttagatttcttggttcttaagcagaactacgat
ttggctatccaacgtaactggcagccaggggatcgcttccgcagtatcattgatgacttg
tggtgggaaggccagttggagacgcgcgaaccttaccaagctcaatgtcctgattccatg
tttctctgttaccgcatcagatgggacaacgatgaagttgatcgcgtaagtccatgggat
ttggaaaaaattgatttggagaggagacctacgggcccaggaacaggtgttccagtgatt
ccctccgagattgccatgacgttgtaccaaccacgggctgaagattggcctccaggaggt
gatcgggattcggaatgcgatcgcatctctgccggacttagccaagttatgggtttggca
atagctgaaccttttgttgcacccgtcgacctcaacttgtatccatcttatgcttacgtt
gttgaatatcctatggatctctccacaatcaaagcgaggctggaaaatcgtttctatcga
cgtgtgactgccgtccaatacgatgtgcgttacgtctacaccaacgcctgcaaattcaac
gagccaaagtcggatattgttcgttcggcttccatcatatccgacttgtgtttggagata
atccgcaaccgcgattctgttgatgctacagccttgtatcatcaactggtggaaaagtac
aagattcgagatgaaggagcggatgagaatgctgcgggtgcaggtcccagtaagagtggt
gttagtaccaagcggaatggttcggctcccaatactcccaatactcctgctgctcttagc
tggaaacagcaatgtaaagacttgatcgatacattgtgtcagtcggaggatgctggacca
tttcgagaacctgtcagtatcctcgatgtaccggattaccttcaagttatcgatcatccg
atggatttggggacggtgcgtgaacagctgcaggtcagcaactacgccacaccgatggat
tttgccaaggacgtccgtcttatcttcgaaaattcaaaaaaatacaacaccctcaagaag
tcgcgcatttttgcaatgactgttcgcctatcggcctcttttgaagagcacattcgcggc
atccttgcttcttataaacaccgtaaaagctctgatagtaagtctcgatgttga

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