Daphnia pulex (common water flea): DAPPUDRAFT_303829
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Entry
DAPPUDRAFT_303829 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12857
Prp8 binding protein
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_303829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_303829
Spliceosome [BR:
dpx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
DAPPUDRAFT_303829
Complex C
U5 SnRNP specific factors
DAPPUDRAFT_303829
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
eIF2A
Ge1_WD40
Nbas_N
Phage_min_tail
Motif
Other DBs
NCBI-ProteinID:
EFX80639
JGI:
Dappu1_303829
UniProt:
E9GI96
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MALVSVNNPSNNELVSATSGQVALQQGPARTSSLMAPIMLLAGHPGDIFSLKFHPDGQFL
VSTGFDRQIFLWNVYGECENFAVLSGHTGAVMDLQLSTDGDTIYTASTDKTICLWDTRTG
AKIKKLKGHSSFVNAIHPARRGPPLLCSASDDCNIKVWDPRKRTETVSLDNSYQATSVTF
NDTAEQVISAGIDNDVKVWDLRKNALLYSLKGHSDTVTGLTLSPDGSYVLSNSMDNSLRV
WDVRPFAPQERCIKMMVGHAHNFEKNLLRCSWSPDGTKVSAGSADRFVYIWDTTSRRIIY
KLPGHNGSVNDVVFHPKEPIVASGASDKLIYLGEIDA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgtgtcagtaaacaatcccagcaataatgaattggtgtcggccacctcgggt
caagtggccctgcaacaggggccagcacgaacgtctagcctcatggctcctataatgctc
ctggcaggacatcctggagatatctttagcctgaagttccatcctgacggccagtttttg
gtttccaccggctttgacagacaaatatttttgtggaatgtgtatggagagtgtgaaaac
tttgctgtgttgtctggtcacaccggagcagtaatggatcttcagctgtctaccgatggt
gataccatttacactgctagtacagacaaaaccatttgtttgtgggacaccagaacagga
gctaaaatcaagaaactgaaaggccactcctcctttgtcaatgctattcatcctgcacga
agaggacctcctcttctctgcagcgcctcagatgactgcaacatcaaagtctgggatcca
agaaaaagaaccgagacagtatcattagataattcttaccaagcgacttccgtcaccttc
aacgataccgccgaacaagtcatttccgcaggcatcgacaacgatgttaaggtctgggac
ttgaggaaaaatgctctcctctactccttgaagggccattccgacactgtaaccggcttg
actctcagtcctgatggatcttacgtgttgtcaaactcgatggacaactctttacgtgtc
tgggatgtacgacctttcgctcctcaagaacgttgtatcaaaatgatggttggccatgct
cacaactttgaaaagaacttacttcgctgctcatggtcacctgacggaaccaaagtttca
gcgggatctgccgaccgattcgtttacatttgggacactacatctcgccgcatcatttac
aaattacctggtcacaacggaagtgtcaatgacgttgtatttcatcctaaggaacctatt
gttgcatccggtgccagtgacaagctgatttacctaggcgaaattgacgcttaa
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