Daphnia pulex (common water flea): DAPPUDRAFT_309189
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Entry
DAPPUDRAFT_309189 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K27396
protein Smaug
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_309189
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
DAPPUDRAFT_309189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
SAM_3
Calmod_bind_C
Motif
Other DBs
NCBI-ProteinID:
EFX71221
JGI:
Dappu1_309189
UniProt:
E9HAQ1
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MTAFLNGLRNESRDVAVSQLLHYLPLLRPANSDGVRGYIHLLPGLLASFLEDDPNLGPSP
SSAQHQSTEIQQLLTYALIHPALSLESKRSLAELIRQLDDEGNQDMALSLLESNHQGGLD
MFPPSDPQSPDAFHSQATRQRPHNGVGQWDPWSSPSPAGLGPPTKQPPPSSCTIQRIRRS
NSLTPPSNSMVYPQDPWGSNQNDNGRIKPRSLSLSSPSETTNGLSHCPLSPQNSLASSGS
GSGSDSIYSDDNHRPSSFHIPGSGMRDVPSWLKGLRLHKYAHLFSLLTYDEMLALTEEQL
ELQGVTKGARHKIALSILRLRERPTLLAQLEKEVVDTGSLHNALSELKNLLSTPIKPYRG
PPVADDQLFIGNLSPSPSPLMTRDDTSGYSSLDGSMDNLAAAARGLSTGSPTALETSDLS
KPPPASPPSTIGQQQQQSSRSTLTASDMPTVIVSAAPDVDSAEEGSDTSADDGLGDNLSS
GNFRSAFGNELELLGGPTHLSLDDLPGQITRLLGKICTQLLVSSCPAEDNVSQFVALMDR
CLSHEAFTQRQRRRIASWKEQAHRIWNNLAPSAPASAAGLGNGTAPGSRGSNNSAIVNAT
SGGVVGSGGPQKSSEARFARRWSNVAHYPGFYSADVAGSSAAQTSFGCAPPNAYSLFPPR
QQQQQQQRGIHASPCPSPSLARPLFAGQSPTHNSYGQHTHHAGGVNAAAQMRPGPAPTTT
TTSTVPHNNPHSLQVGSHLPLQHRNSFCVSALSHQSSLYSSSSTSSSSSSQGYSSLSSCG
VVAAPDPFTFSPPHRMHFDELPSESLPFASCQLGIQRARSAPMANGGVINNSSLLFSQER
DASEMDLNHRLESLCLSMTEHALEGANDI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctttttgaacggattacgcaacgagtcacgcgatgtagccgtctctcaactg
ttgcattacctgccgctgctacggccggccaactctgatggagtccgaggatacatccac
ctcctgcccggattgttggcctcattcctggaggacgatcctaacctgggaccttcgcca
tccagcgctcaacatcaatcgaccgaaattcagcagctcctcacctacgctctcattcat
ccggccctctcgctggaaagcaaacggtcactggctgagctgattcggcagctggacgac
gaaggaaatcaagatatggcgctgtcattactggagagcaatcatcaaggcggactggac
atgtttcctccgtcggatccgcaatctccggatgccttccattcacaggcaacgagacag
aggccgcacaatggtgtcgggcaatgggatccttggagttcgcccagtcccgccggattg
ggtccaccaaccaaacaaccgccaccgtccagttgcacgatccagcgcatccggcgcagt
aacagcctgactccaccgtccaattccatggtctatccgcaagatccttgggggagtaat
cagaacgataacggccgcatcaagccgagatccttgtctttatcgtcgccgagcgaaacg
accaacggcctatctcactgccccctgtcgcctcagaattcgctggcctcttccggcagc
ggaagcggatccgactcgatttacagcgacgataaccaccgaccgtcatctttccacatc
cccggaagcggcatgagagatgtcccgtcgtggctgaaaggattgcggctgcacaagtac
gctcatttgttctctctgctcacttacgacgagatgctggcgctgactgaagagcagctg
gaactgcaaggagtgaccaaaggagcccgacacaagattgccctgagtatcctccgcctc
cgcgagcggcccacgcttttggctcaattagaaaaggaggtcgtcgacacgggcagtttg
cataatgccttgagtgagctgaagaatttgctgtcgacgcccatcaaaccgtatcgcggc
ccgcccgtagccgacgaccagctctttatcggcaatttgagtccgtcgccgtcgccgctc
atgacgagagatgacacttcgggctactcgtctctcgacgggtccatggacaatttggcg
gcggcggctcgaggcctttctaccggctcacccactgccttggagactagcgacctgtcc
aagccgccgcccgcctctccaccgtcgaccattggccagcagcagcagcagtcgagcagg
tcgaccctgacggcctctgacatgccgacggtgatcgtttcggccgcgccggatgtcgac
agcgccgaggaaggcagcgacacgtcggccgacgacgggctgggcgacaatctctcgtcg
ggcaactttcgctccgccttcggtaacgaattggagttgcttggcgggccgactcacctg
tcgctcgacgacctgccgggacaaatcactcgccttttgggcaaaatttgcacgcagctt
ttggtctcgtcctgcccggccgaagacaacgttagccagtttgtggctttgatggaccgc
tgcttgagtcacgaagctttcacccagcgccagcgtcggcgcattgcgtcatggaaagaa
caggcccatcgcatttggaacaatttggctccttcggctccggcttcggctgctggactc
ggcaacggcactgcccccggcagccgcggtagcaacaattcggcaattgtgaatgcaaca
agcggcggtgtcgtcggtagcggtgggccgcaaaagagctctgaagctcgtttcgcccgt
cgatggagcaatgtggctcattaccctggattctacagcgccgatgtagctggcagcagc
gctgcccagacttcgttcggatgcgctccgcccaacgcctatagcctctttccgccgaga
cagcagcagcagcagcagcaaaggggaatccacgccagtccgtgccccagtcccagtcta
gcccgtcctttattcgctggacagagccccacccacaattcttatggccagcacacccat
cacgctggaggtgtgaacgcggccgctcaaatgcggcccggcccggcgccgaccaccacc
accacctcaacggtgccgcacaacaatccgcattccctccaagtgggatcgcacttacca
ctccagcaccgcaacagtttctgcgtcagcgccttgtcgcatcaatcgtcgctctactct
tcgtcctcgacgtcgtcgtcgtcgtcgtcgcagggctactcttctttgtcttcgtgcggc
gtcgtcgctgctcccgaccccttcactttctctcctccacaccggatgcactttgatgaa
cttccgtcagagtcgttgccatttgccagttgccagttggggatccagcgggccaggtca
gcccctatggccaatggtggcgtcatcaacaacagcagtttgctctttagccaggaaaga
gacgcctccgaaatggatttgaatcatcgcctcgagtcgctctgcctcagcatgacggaa
cacgcgctcgaaggagccaacgacatctag
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