Daphnia pulicaria: 124326088
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Entry
124326088 CDS
T08670
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpz02000
]
124326088
Transporters [BR:
dpz02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124326088
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124326088
NCBI-ProteinID:
XP_046640660
EnsemblRapid:
LOC124326088
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All DBs
Position
2:10655232..10660610
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AA seq
703 aa
AA seq
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MSKNELAGCVNESFQMNEVIISDHQQVTNELPTEDSTAEKNISKPIKDSVAPDEKDKKVF
PAVAIRNNLQLFVENIVKNKKVSCGHGKTSEVDVASKESKDAQCERGGWKNEWDFLFSCI
SVSVGLGNIWRFPYLCFKNGGGTFLVTYFVAMVVCGIPIFYQEVAIGQYLGVGGMTLIAE
LAPIMKGVGYATMTVTFLVNIYYSVIVAWTLFYFIASFAALPGLPWQSCGNSWNTIDCFQ
PTSNASVLHNGSVSAVEEFWSRRVLAITDGIENPGGMRWELFGVLILSWVMIYFIIWKGI
NQSGYIIWFTALFPYVILSVLVVRAVTLDGAGDGLLYYITPNFDLLLTSGPWIDGATQIF
FSYSIGTGALPALGSYNKFKHNCYRDAIITCVVNTLTCLIAGVVTFSILGNIASATDSSI
ESVVSSGPGLVFITYPEVVLRLPGAPFWAIIFFMMLVILGIDSEFCVVEAFVTGIVDNWP
NQLRKCRRLFVVATIIVIFLLSLPMITEGGVYLFQIMDYYSASGMSMLFLVFFQTISINW
IFGGNKFCDAVEQMLGQKPSRFLYICWVFLAPAVMLGIFVFSIVQYTPVTYGLGYQYPTW
AEALGICISLSSMLWIPLYAAYYIYITPGTLREVLTKGVTPIFKIRSELSSPVIQQTIAD
VQGSQPDSSLVTVSSDLHGMNHRESAVVMVSFDIDNSKMEINE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaatgagttagcggggtgtgtgaacgaatcttttcaaatgaacgaagtgatt
attagcgatcaccaacaagtcacaaatgaattgccaactgaagattcgactgccgagaag
aacatttcaaagccgatcaaagactctgttgcccccgacgaaaaggacaagaaagtgttt
ccagctgtcgccatcagaaataatctccagttattcgtcgagaatattgtcaaaaacaaa
aaggtttcgtgtggtcacggaaaaacaagtgaagttgacgtggccagcaaagagtccaaa
gacgctcaatgcgaaaggggcggatggaaaaacgaatgggacttcctgttttcttgcatc
agcgtgtcggtgggattgggaaacatttggcgctttccttatctgtgcttcaaaaatgga
ggcggtacatttttggtcacctactttgtcgccatggtagtttgtggaatacctattttc
taccaggaagttgcgattggacaatatctgggagtcggaggaatgacactaatagctgaa
ctagcacctattatgaaaggtgttggatacgcgacaatgacggtcacctttttagtcaac
atttattactccgtcatcgtggcgtggaccttgttctatttcatagcttcctttgccgct
cttccaggactaccatggcaatcttgtggaaattcgtggaacacaatcgactgtttccag
ccaacgtcaaacgcaagtgttttgcacaacggttccgtttcagcagttgaggaattttgg
agtcggcgtgtgctggcaatcaccgacggcatagaaaatcctggagggatgcgatgggag
ctatttggagtgctcattctaagttgggtaatgatctacttcattatatggaaaggaatt
aaccaaagtggttacatcatctggtttacggccttattcccttacgtcatcctgtccgtg
cttgtcgtaagagctgtcactttagatggagccggtgatggacttctctactacatcacg
ccgaattttgatctcctcctaacatcggggccttggattgatggcgctacgcaaatattt
ttcagctacagcatcggaacaggagctctacctgccttgggctcttataataaattcaag
cacaactgttatagagacgccattattacatgtgtggtcaataccttaacgtgtttaata
gccggagtggttacgttttcaatattgggcaacattgcttctgctaccgactcgtcaatc
gagtctgtcgtttcgtctggtcctggtcttgttttcattacctatccggaagtcgttttg
cgacttcccggagcaccattctgggccatcattttctttatgatgcttgtaattctagga
atcgacagtgaattttgtgtggtcgaggccttcgttaccggaatcgttgacaactggccc
aatcaactgaggaagtgcaggaggctgtttgtagttgctactataattgtcatatttctt
ctctctttaccaatgataactgagggaggggtgtacttgtttcaaattatggactattat
tcagccagtgggatgtcaatgctttttctagtgttttttcaaacaatttccatcaactgg
atatttggtggcaataaattttgcgatgccgtcgagcaaatgctcggacagaaaccatct
cgatttttgtacatttgctgggtcttcctggctcccgccgtcatgctgggcatcttcgtg
ttttccatcgttcagtacacgccagtgacctacggtctgggttaccagtatccaacgtgg
gcggaagcattaggtatttgcatatctctgtcgtcgatgctctggataccgctctatgca
gcttactacatctacatcacaccgggcactttgcgggaggttttaaccaaaggagttaca
ccgatttttaaaataaggagtgaattatcatcgccagtaattcaacagactattgcggat
gtccaagggtcccagccggactcgtcattagtgacagtcagcagtgatttgcatggcatg
aatcatcgtgaatcagctgtggtgatggtcagtttcgatattgacaacagtaaaatggaa
attaacgagtaa
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