Daphnia pulicaria: 124338630
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Entry
124338630 CDS
T08670
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124338630
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpz04812
]
124338630
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124338630
Cytoskeleton proteins [BR:
dpz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124338630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
HEAT_GCN1
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
Cnd1
HEAT_2
Adaptin_N
HEAT_ECM29
HEAT_MROH2B_C
HEAT_GCN1_C
TPR_CAND1
VPS15-like_hel
Dopey_N
MMS19_C
Sec7-like_HUS
INTS1_R4
HEAT_DAAF5
KIP1
Motif
Other DBs
NCBI-GeneID:
124338630
NCBI-ProteinID:
XP_046648725
LinkDB
All DBs
Position
4:complement(18070096..18079831)
Genome browser
AA seq
1456 aa
AA seq
DB search
MSNLDLFLPLLGTTDVRKKILIGDDIIAYLSSPDNPPKCEDIGLFIDGLVSWINNSNFKV
CQNGLEILSLLVNRLKEDFRPYIQTILHAVIDRLGDAKDSVREKAEDFILKLMEWSIQPQ
ILWERLLSAFVHRNNKVREEIHKILIVTLNSYGSSSLSLNKLVPSIVKCLSDPTPAVRDT
AFQTLVEIYRHVGEKVRADLEKRGNVPPAKLHVLFARFDEVRDAGDLLPTAVLSVDCMAK
TTEDEPDRSLLLTGSKRATSAPAVRKLVVPSSITKTVTSSIANTAPMTGGGMDEETFIRA
FEDVPKIQIYSAKEMEEHLINMRSIIQDPNNDWAKRAETLKKIRSLLIAGAANYDELWQH
IRLLETAFQTSVKDLRSQVVREACVSIAFMSQQLQNRLDHFAEALLNPLIILIPNSAKIM
ATAGTVCIRFIIAHTHSARLIPILTNHMTSKSKDIRRAMCEFLDQLLHTWPTHILEKHVA
LIQSAVSNGIKDADPDARAFSRKAYGGFASHFPAQADALLHSLDLSYQKLLYGESSLSNS
SSSHSLQSAGVSRPSSNANSGPASLPVHPRLKVGSSENLTRLPGIPPRKIAMPSYGARPG
GGINGAVTSGIRSNSAIDLQAANRAVRNIRGGYVAPLPPTKKDSNSSDPRAVTSPDHRSS
RTRSRTSGSSQSQPGSRSGSPSSRYSYKTYDPSGTPVRHVDSSTLGRPRRLSSSGMVANA
TPPRGPRSSNTSREPSPNRGGNHSVLSKPARVRSQSGCSEKGTPSRPVLAQKILQQSREA
ESALSDALTRPRVGGYDDHSDESETSSVCSERSMDSVNRRSDRHFRENWLESPHKDIYDI
ITACSSTHWSERKEGLMGLQAFLRSGNLIPTHELRKLIEILGKMFTDAHTKVFSLFLDAL
TILIEIHKDDMHENLYFLMSRLLNKLGADLLGSVQAKTLKTLDLVRYCFPYSLQMALLLR
FMMDNTQTPNSRVKVALLNYLTALVRDMQPSDLTAVTSQMGSPGLMMGMAGVGASVSPQL
VEASIAKVVAWTSDVRSAEVRKASQDAIYALFSLHPAEVTRILNTLPKVCQDSAGQIIQS
QLNRTMDNVSLNRASDSPTSVVAGSSPLRSPVTPQSQFQMPILSSQQPSTPTYFSKISSS
RSLENDENEHYNPEEVYKSIRKTTAEIQNYSFEKSSLERDSTSQDSGISQLSHLSFEKNK
GEIKSLPLEEKRQKTLPNSVGTDVFMSPMEQADRATMQRILALFGKEDSESRKDAMRMLT
QLMHQGAGNLIEDNFRPVFKHLVSCREDPDSFVRRQVFNLWATMLSTPRLLEEMENYADL
ILVNIFRAQRDQEREVVRSAESCAKTLAAVLSLNKLIRILKHAIGDNYPENYTAIKTLTR
LVEQRPHEDTVTILPEMMPALLRATDHAESIVRKAAVFCIVEIYKRAPDELKPYLESLNS
SKMKLINVYIQRAGPT
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacttggatttatttttacctttactggggacaacagatgttaggaaaaaaatt
ttgattggggatgacataattgcctacctttcttcgcctgataaccctccaaaatgtgaa
gatattggtttgtttattgatggccttgtttcttggatcaacaacagcaatttcaaggtg
tgtcaaaatgggttagaaattttaagtcttttagtgaatagactaaaagaggattttcgc
ccgtacatccagactatccttcatgccgtgattgatcgattaggagatgcaaaagactcg
gttcgtgaaaaggccgaagattttattttaaaattaatggaatggagcattcaaccacaa
atattgtgggaacggttgctttcagcctttgtccacagaaataataaagttcgagaggaa
attcacaaaattctgatcgtaacgttaaattcgtatggaagtagctcattgtcactgaac
aaacttgtgccatccatagtaaaatgtcttagcgaccctacgcctgctgtaagggatact
gcatttcaaactctggttgaaatttatcgccatgttggtgaaaaggttcgcgctgattta
gaaaagcgaggaaatgtcccacctgccaagttacatgtcctattcgcaagattcgatgaa
gttcgggacgctggagatctgttacctaccgctgtcctctcggttgactgtatggctaag
accacggaagatgaacctgaccgctccttgttattgacgggatcaaaaagagctacaagt
gcccctgccgtacggaaattggtggtaccatctagtatcaccaaaactgtaacctcatcc
attgccaatacagctcccatgacaggaggaggaatggatgaggagactttcataagagca
tttgaagacgttccaaaaattcagatatactctgccaaagaaatggaagaacatctgata
aacatgagatcgattatccaagatcccaacaatgattgggccaaacgagccgaaacttta
aaaaagattcgatctctgttgattgcgggagccgccaactacgatgaattatggcagcat
atccgcctcttggaaacggcgtttcaaacaagcgtgaaagatttaaggtctcaagttgtg
cgagaagcgtgtgtgtcaattgcattcatgtcacaacaattgcaaaacagattagatcac
ttcgctgaagctttgttgaatccgttaatcatactgattccaaacagtgcaaagatcatg
gctacagcgggcaccgtctgcatacgcttcatcatcgcacatactcacagtgctcggctt
atccccattctcaccaatcacatgacttcgaaatccaaggatattcgccgtgccatgtgc
gaatttctagatcagctgcttcacacgtggcccacgcacattcttgaaaaacacgtcgct
ctcattcagagtgctgtgagcaacggcatcaaagatgcagacccggatgcccgcgcgttt
tctagaaaggcctatggtggattcgcttcccattttcctgctcaggccgatgcgttgctt
cattctttggatctctcttaccagaaactgctctacggagagtcaagtctttccaattcc
agttcgagccattcattacaatccgccggggtgtctcgaccttcgtcaaatgcaaattcg
gggccagcgtctcttccagttcatccgcgtttaaaagtcggctcatcagagaatttaacc
aggcttcctggaattcctccgagaaagatagcgatgccttcttatggtgcacggccagga
ggtgggataaatggagcagtgaccagtggtattcgttcgaattctgccatcgatttacaa
gccgccaatcgggctgtccggaatattagaggaggctatgttgcgccattgcctcccact
aaaaaagatagtaattcttcggatccccgtgctgtcacctctcctgatcaccggagttct
aggacccgttcaaggacttcgggatcttcgcagtctcaacctggcagccgatcaggatcg
ccttcgtctagatattcatacaaaacgtacgatccttctggaactcctgtgcgacatgta
gacagttcaacattaggtcgtcccaggcgattatccagtagtggaatggtcgccaacgca
actccacctcgtggacctcggagcagcaacacgagccgtgaaccaagtcctaatcgtggt
ggaaatcactcagtgctctccaaacctgccagagttcgttcacaatctggatgtagcgaa
aaaggtacccctagtcgtccggtgctagcccagaaaatcctccagcaaagccgcgaagcc
gaatctgctctctctgatgctctgactcgcccgcgtgttggaggatatgacgatcactcc
gacgaaagcgaaacgtcgagtgtgtgctcagaacgttccatggattcagtaaaccgtcgc
tccgatcgccattttcgggaaaattggcttgaatcaccccacaaggatatttacgatatt
atcactgcatgttccagtactcattggtccgagaggaaagagggtttaatgggactgcaa
gccttcttgcgctctggaaacttgattccaacgcatgaattgcgcaagttaattgaaatc
ctagggaaaatgttcactgacgcccatactaaagttttcagcttgtttttagatgcgtta
acgatattgattgagattcacaaggatgatatgcacgaaaatttgtattttttaatgagt
cgtctgctcaacaaattgggtgctgatcttttgggatctgttcaggctaaaacgctgaaa
acattggatttagtccgatactgtttcccgtattccttacaaatggcattactcttgcga
ttcatgatggataacacgcaaacaccaaattctcgcgtaaaggtggctttacttaattat
ctaactgcattagttcgcgacatgcagccgtcagacttaactgctgttacgtctcaaatg
ggatccccaggtttaatgatgggtatggcgggagttggagcttcggtgtctccacaactc
gttgaagcttcaattgctaaagtagtggcatggaccagcgacgtcagatctgccgaagtt
cgaaaggcttcacaggatgcgatttacgctctatttagtttgcatccagctgaggtgaca
cgtatacttaacacactcccaaaagtgtgtcaggatagtgcaggacaaatcattcaatct
caattaaaccgaaccatggataacgtaagcttgaatagagcatcggattctcctacatcc
gttgttgcaggttcctcgccactgagatcacccgtcacacctcaatcacaatttcaaatg
ccgattctgtcgtctcagcaaccgtcgacgccaacctatttttcgaaaatctcttcatct
aggtcgctggaaaatgacgaaaatgagcattacaatccagaagaagtttacaaatcgatc
agaaaaaccactgcggaaatccaaaattacagttttgagaaatcctctttggagcgggac
tcaacatcacaagattctggcatatcgcagctgtcacacctgtcgttcgaaaagaataaa
ggagaaatcaaatccttaccattggaagagaagcgtcagaaaactctaccaaattctgtt
ggaactgacgttttcatgtcacccatggagcaggccgatagagcaacgatgcagcgaatt
cttgcgttattcggaaaagaagattcggaatcgcgcaaggacgccatgcggatgctgacg
cagttgatgcaccagggcgctggcaatttgattgaagacaacttccgccctgtcttcaag
cacttggtgtcgtgtcgtgaagatcccgactcttttgttcgccgtcaagtattcaatctt
tgggcaaccatgttgtcaactcctagactgctggaagaaatggaaaactacgctgactta
attcttgtcaatatttttcgggcacaacgtgatcaagaaagagaggttgttcgttcggca
gaaagttgcgccaaaaccttagctgccgttctgtcgctgaacaagcttattcgcatttta
aaacatgccattggtgataattaccctgaaaactatactgcgatcaaaaccctgacgcgg
ttggttgaacaacgtcctcatgaagataccgtaactattttacccgaaatgatgcctgcc
cttctgcgtgccactgaccatgccgagagtattgtgcgaaaagcagctgttttctgcatc
gtagaaatttacaaacgagcaccggacgaattgaaaccatacctagaatcactgaatagc
agcaaaatgaaattgatcaacgtttacattcagagagctggccctacgtag
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