Deinococcus radiodurans: DR_0912
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Entry
DR_0912 CDS
T00025
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dra
Deinococcus radiodurans
Pathway
dra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DR_0912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dra03021
]
DR_0912
03400 DNA repair and recombination proteins [BR:
dra03400
]
DR_0912
Enzymes [BR:
dra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DR_0912
Transcription machinery [BR:
dra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DR_0912
DNA repair and recombination proteins [BR:
dra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DR_0912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AAF10490
UniProt:
Q9RVV9
LinkDB
All DBs
Position
1:complement(923560..927099)
Genome browser
AA seq
1179 aa
AA seq
DB search
MRFWTWTRAAAPRFPACEVCMTLSKTPPRIERFGDITEVIPLPNLTEVQVNSFKAFLQDD
KAPDQREDVGLQSAFREVFPIDESEKGRSTGMVLDFIEYRLGEPEYSPEECREKDLTYEA
PLYVKLELIHKDTGVIKGFKPDSPPESWVFLGNLPLMTFDGSFIINGADRVVISQIHRSP
GVYFTSSYKGIKKQYTAAIIPMPKRGPWIELEFAGDVLEMKVNKRKFPVSLLLRVLGMDD
ASIRALFTEFTPEVEPGEDKSAGMGADEALLRLFTVLRPGDPPKRDKAIQYLFGLLADPR
RYDLGEPGRFKMNTKLGVQRQERTLLKFEDGKFSDAGLVDTIRYLMALQQGLETVPMVDE
DGVVTDVPVAEDDIDHLGNRRVRTVGELLADQLRVGMGRMARGVRERMLLGNPDAATPTK
LVNNRPIVAAMREFFGRSQLSQFKDQTNPLSDLRHKRRISALGPGGLTRERAGFDVRDVH
RTHYGRICPIETPEGANIGLISSLSSYAKVNDLGFIMAPYRKVEDGKVTNQVEYMTADIE
DRYTIAQANSPLNEDNTFADERVLARRKGDPLLYTPDEVDYMDVSPKQIVSINTSLIPFL
EHDDANRALMGSNMQSQAVPLVRADSPAVGTGVERRVVTDSGTSVVSDVNGRVSYVDARA
IQVTLSEDHRELNMNAGNVRTFELIRFTRSNQGTNLDQHPIVSVGDEVKVGQVIADGPAS
ERGRLALGQNITIAIMPFDGFNFEDAICINEDLVRQDFYTSVHIEKDEIEARDTKLGPEK
ITRDIPGLSEAALRDLDEDGIVRVGAEVKPGDILVGKTSFKGESEPTPEERLLRSIFGEK
AREVKDTSLRVQSGQGGIVVKTVRFRRGDEGVDLKPGVREMVRVYVAQKRQLQVGDKVAN
RHGNKGVVSKIVRPEDMPYLEDGTPVDIVFNPLGVPSRMNLGQILETHLGEVARLTGQKF
ETPVFDSVTEATIKEMLEVAAAERLQARKDDGFELDKREQEVLDRAGKLGVIDAPGDDYE
KGQMQLARTGKSILYDGRTGEPISGPVVVGIMYVMKLYHMVEDKLHARSTGPYSLITQQP
LGGKAQFGGQRFGEMEVWALEAYGAAHVLQEMLTIKSDDIDGRDAAYQSIVKGEEVSGST
IPESFKVLVKELHSLGLDVEVLDHGDKAVDIFEGMMPKR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcttttggacctggacgagagccgcagccccgagatttccagcgtgcgaggtgtgc
atgaccctgagtaagactcccccccgcatcgagcggttcggtgacatcaccgaagtgatt
ccgctccccaacctgaccgaagtgcaggtcaactctttcaaagcctttttgcaagacgac
aaggcccccgaccagcgcgaagacgtggggttgcaaagtgctttccgcgaggtctttccc
atcgacgagtccgaaaagggccgctcgacgggcatggtgctcgactttatcgagtatcgc
ctcggtgaacccgagtacagccccgaggagtgccgcgaaaaagacctgacgtatgaagcg
cccctctacgtcaagctcgaactgattcacaaagacactggcgtcatcaagggcttcaag
cccgacagcccgcccgaaagctgggtcttcctcggcaacctgccgctcatgaccttcgac
ggctcgttcatcatcaacggcgccgaccgcgtggtcatctcgcagatccaccgctcgccg
ggcgtgtacttcacgagctcctacaagggcatcaagaagcagtacaccgccgccatcatt
cccatgcccaagcgtggcccctggatcgaactcgagttcgcgggtgacgtgctggaaatg
aaggtcaacaagcgcaagttccccgtctcgctgctgctgcgcgtgctgggcatggacgac
gcttcgattcgtgcgctgttcaccgagttcacgcccgaagtcgaacccggcgaagacaag
agcgcgggcatgggcgccgacgaagccctgctgcgcctgtttaccgtgctgcgccccggc
gacccacccaagcgcgacaaggcgattcagtacctcttcgggctgctcgccgacccgcgc
cgctacgacctgggcgaaccgggccgcttcaagatgaacaccaagctgggcgtgcagcgt
caggaacgcaccctgctgaagttcgaagacggcaaattcagcgacgccgggctggtggac
accatccgttacctgatggcgctgcaacagggcctcgaaactgtgccgatggtggacgaa
gacggcgtggtgaccgacgtgcccgttgccgaagacgacatcgaccacctcggcaaccgc
cgcgtgcgcaccgtgggcgaactgctcgccgaccagctgcgcgtgggcatgggccgcatg
gcgcgtggcgtgcgtgagcgcatgctgctcggcaaccccgacgccgcgacccccaccaaa
ctggtcaacaaccgccccatcgtggcagcgatgcgcgagttctttggccgctcgcagctc
tcgcagttcaaggaccagaccaacccgctctccgatctgcgccacaagcgccgcatctcc
gcgctggggccgggcggtctgacccgcgagcgcgccggcttcgacgtgcgcgacgtgcac
cgcacccactacgggcgcatctgcccgatcgaaacgcccgaaggcgccaacatcggtctg
atttcctcgctgtcgagctacgccaaagtcaacgacctcggcttcatcatggcgccctac
cgcaaggtggaggacggcaaggtgaccaatcaggtcgagtacatgaccgccgatatcgag
gaccgttacaccatcgcgcaggcgaacagcccgctcaacgaagacaacaccttcgccgac
gagcgcgtgctggcccgccgcaagggtgacccgctgctctacacgcccgacgaagtcgat
tacatggacgtgtcgcccaagcagatcgtgtccatcaacacctcgctgattcccttcctg
gagcacgacgacgccaaccgcgcgctgatgggttcgaacatgcagtcgcaagccgtgccg
cttgtgcgtgccgactcccccgccgtgggcaccggcgtcgagcgccgcgtggtgaccgac
tcgggcaccagcgtcgtgagcgacgtgaatggccgcgtgagctacgtggacgcccgcgcc
attcaggtgacgctgagcgaagaccaccgcgaactcaacatgaacgcgggcaacgtccgc
acctttgagctgatccgctttacccgctccaaccagggcaccaacctcgaccagcacccc
atcgtgagcgtgggtgacgaggtcaaggtcggccaggtcatcgccgacggcccggcgtcc
gagcgcgggcggctggcgctggggcagaacatcaccatcgccatcatgcccttcgacggc
ttcaacttcgaagacgccatctgcatcaacgaagacctcgtgcgtcaggacttttacacc
tcagtccacatcgagaaggacgagatcgaagcccgcgacaccaagctggggccggaaaag
atcacccgcgatattccgggcctgtccgaagccgcgctgcgtgacctcgacgaagacggc
atcgtgcgcgtgggcgccgaagtcaagcccggcgacatcctggtcggcaagacctccttc
aagggcgagtccgaacccacccccgaagagcggctgctgcgctcgatcttcggtgagaag
gcccgtgaagtgaaagacacctcgctgcgcgtgcagtcgggtcagggcggcatcgtcgtc
aagaccgtgcgcttccgccgcggcgacgaaggcgtggacctcaagcccggcgtgcgcgag
atggtgcgcgtgtacgtggcccagaagcgtcagcttcaggtgggcgacaaggtggcgaac
cgccacggcaacaagggcgtcgtgtccaagattgtgcgccccgaagacatgccttacctc
gaagacggcacccccgtcgacatcgtgttcaacccgctgggtgtgccttcgcgcatgaac
ctcgggcagattctcgaaacccacctcggtgaagtcgcgcgcctgaccggccagaagttc
gagaccccggtgttcgactcggtgaccgaagcgaccatcaaggaaatgctcgaagtggcc
gcagccgaacgtctccaggccagaaaagacgacggcttcgaactcgacaagcgtgagcag
gaagtgctcgaccgcgccggcaagctcggtgtgatcgacgcccccggcgacgactacgag
aagggccagatgcagctcgcccgcaccggcaagagcatcctgtacgacggacgcaccggc
gagccgatcagcggccccgtggtggtcggcatcatgtacgtgatgaagctctaccacatg
gtggaagacaagctgcacgcccgctccaccggcccctactcgctcattacccagcagccg
ctcggcggcaaggcgcagttcggcggccagcgcttcggcgaaatggaagtgtgggccctc
gaagcctacggcgcggcgcacgtgctccaggaaatgctcaccatcaagtccgacgacatc
gacggccgcgacgccgcttaccagagcatcgtcaagggcgaagaagtctcgggcagcacc
atccccgagtccttcaaggtgctggtcaaggaactccactcgctcggtctggacgtcgag
gtgctcgaccacggcgacaaggccgtggacatctttgaagggatgatgcccaagcgctaa
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integrated database retrieval system
