Draconibacterium halophilum: G0Q07_04385
Help
Entry
G0Q07_04385 CDS
T06417
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
drc
Draconibacterium halophilum
Pathway
drc03410
Base excision repair
drc03430
Mismatch repair
drc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G0Q07_04385 (recJ)
03430 Mismatch repair
G0Q07_04385 (recJ)
03440 Homologous recombination
G0Q07_04385 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drc03400
]
G0Q07_04385 (recJ)
DNA repair and recombination proteins [BR:
drc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G0Q07_04385 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G0Q07_04385 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G0Q07_04385 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DNA_topoisoIV
Toprim
Motif
Other DBs
NCBI-ProteinID:
QIA07021
UniProt:
A0A6C0RD15
LinkDB
All DBs
Position
1085828..1087555
Genome browser
AA seq
575 aa
AA seq
DB search
MDRIWNLKKQGDQNEVKHLSAALNVNMVIARLLVQRGIETYPEAKAFFRPRLSDLHDPFL
MKDMDKAVARLDKAVENKEKVIVYGDYDVDGTTSVALMYSFLKQRIKDIEYYIPNRYSEG
YGISPKSIDYAIDKGVTLIVALDCGIKAVEKIAKAKERGLDFIVCDHHNPDDEVPPAVAV
LDAKQSDCNYPYKELSGCGVGFKLLQGYCKKHEIDYEEIYDLLDLVAVSIAADIVPITGE
NRVLAYYGLKKLNSNPGIGLQTIINFAGIAGTEITISDIVFKIGPRLNASGRIEHGKKSV
QILVSTDEDKSDLLGEEIDSFNEIRKTLDRDITQDALDTIENNPEFKGKNSTVLYNRDWH
KGVVGIVASRVTEQYYRPTIILTESNGLATGSARSVRDFDLYEAIGQCSDLLESYGGHMY
AAGLTMRIENIPEFRQRFEEIVTKQITDKQQVQSIEVDAKIALSEITPRFYRILKQFAPF
GPHNMMPVFVTEDVFDAGTSRLVGKNQEHLKLDLVEPDVNSGIFPGIAFNQSDAYDVITS
GSPFDVCYSINENEYRGKTNLQLFIRDIKKREFLN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatagaatttggaacttaaaaaaacaaggcgaccaaaacgaggttaaacatctttca
gcggcgttgaatgtgaatatggtgatagcccgcttgctggtgcagcggggaatagaaacc
taccccgaagccaaagcatttttccgcccccgactgagtgacctgcacgatccgtttttg
atgaaagatatggataaagcggttgcccgattggataaagcagttgaaaataaggaaaag
gtaattgtttacggcgattacgatgtggatggaactacatcggtggcgttgatgtattcg
tttttgaaacagcggattaaagatattgaatattatattccgaaccgttacagcgaggga
tatggaatttcgccaaaaagtattgattatgccatagataaaggagtaacgcttattgtt
gccctcgactgcggtattaaagctgttgaaaaaattgccaaagccaaagagcgcgggctc
gattttattgtctgtgatcatcataatccggatgatgaagtgccgccggctgttgcagta
ctcgacgcaaaacaatcggattgtaactatccttacaaagaactttcgggttgcggtgta
ggatttaaattattgcaagggtactgcaaaaaacacgaaattgattacgaagaaatatat
gatctgctcgatttggtagcggtgagtattgctgcagatattgttccgataaccggagaa
aacagggtgctggcttattatggccttaagaaacttaactcgaatccgggaattggcttg
caaaccattattaattttgcaggaattgccggtaccgaaattaccatcagcgatattgtt
tttaagattgggccacgattaaatgcctcgggccgtattgagcacggtaaaaaatcggtg
cagatattggtttcaaccgatgaagataaatcggatctattaggcgaagagattgactct
ttcaacgagatcagaaaaacattagaccgcgatattacccaggatgcgctggataccatt
gaaaacaatcccgagtttaaaggtaaaaacagcacagtgctttataaccgcgactggcac
aagggagtggttggaattgtggcatcaagagttaccgagcaatattaccggccaacgata
attttaaccgaatcaaacggtttggcaacgggatcggcacgttcggtgcgcgattttgat
ctttacgaagctattgggcagtgcagcgatttgctggaatcgtacggtgggcacatgtac
gctgcaggattaacaatgaggattgagaacattccggaattccggcaacgttttgaggag
attgttaccaaacagataactgataaacaacaagttcaatctattgaggtggatgccaaa
attgcgcttagcgaaattacgccgcgcttttatcgcattttaaaacaatttgcaccgttt
gggccgcacaatatgatgccggtttttgttaccgaagatgtttttgatgccggtaccagc
cgtttggttggtaaaaaccaggagcacttaaaactcgatttggtggagcccgatgttaat
tcaggaatattcccgggcattgcttttaatcaatcggatgcttacgatgtaattacttca
ggctcgccttttgatgtgtgctattcgattaacgaaaatgaataccgtggtaaaaccaat
cttcagttatttataagagatatcaagaaaagagagttcctgaattaa
DBGET
integrated database retrieval system