Danio rerio (zebrafish): 100150472
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Entry
100150472 CDS
T01004
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100150472 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
100150472 (slc6a11b)
Transporters [BR:
dre02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100150472 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
PRY
Motif
Other DBs
NCBI-GeneID:
100150472
NCBI-ProteinID:
XP_073772263
ZFIN:
ZDB-GENE-121116-2
Ensembl:
ENSDARG00000087981
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Position
11:complement(1155626..1203455)
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AA seq
617 aa
AA seq
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MTAEKSIPIINGKAEESMDPESANPSVVRSNDKKVVNERGQWNNKVEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANF
TNPYSTSPVMEFWERRVLKISSGIEEVGGLRWELALCLAIAWVICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLLRGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWAPLWAALFFMMLIFLGLDSQFVCVESLVTAIVDMYPKTFRVGY
RRELLILGMSIASFFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSD
RFYMNIEDMIGYKPIFFIKWCWKFFTPGICTGIFLFFLIKYKPLKYNNVYTYPDWGYGIG
WMMAMSSMVCIPLGILFQIWKTKGTFRERIKKLTTPSADLRMRGHVASRGPCAINDADAK
MRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagtccatccccataataaatggaaaagcagaggaaagcatggacccc
gaatcggctaaccccagcgtagtgcgcagcaacgataagaaggtggtgaacgagagagga
cagtggaataataaggtggagtttgtgctgtcagtggccggagagattatcggcctcgga
aacgtctggagattcccatatctgtgttacaagaacggtggaggtgctttctttgtgccg
tacgtcatcttcttcgtctgctgtgggatcccagtcttcttcctggaaacagcattaggt
cagttcaccagtgaaggaggcatcacgtgttggagaaaagtctgcccactgtttgaaggc
attggatatgcgacccaagtcattgaagcacacttgaatgtgtattatgtggtaatattg
gcgtgggctattttctacctgttcaactgctttacaacagagctgccctgggcttcatgt
ggccactattggaacacagaaaactgtgtggattttaacaatgaaagcattgccaacttc
accaacccatattccacatcaccagtcatggagttttgggaacgccgtgttctcaaaata
tcctctggaattgaagaagtcggcggccttcgctgggaactcgccctttgtctcgctata
gcctgggtcatatgttatttctgcatttggaagggtcccaaatcaacgggaaaggtggtg
tacgtcactgcgacctttccgtatttcatgctgttgatccttcttctacgaggaatcacg
ctgcctggagctgctaatggaataaagttctacctgtatcccgatatctctcgtctatca
gaccctcaggtgtgggtggatgccggcacgcagatcttcttctcatatgctatatgtctg
ggttgtttaacggctctcggcagctacaacagttacaacaacaactgctacagagactgc
ctcatgctctgctgcctgaacagtggcaccagttttgtggcaggatttgccatcttctct
gtcctgggcttcatggcgtatgaacagaacgtgcccatagaggctgtggcagagtcaggt
cctggtctagcgtttatagcgtatcctaaagctgtgaccatgatgccgtgggctccgctg
tgggctgcgctcttcttcatgatgctcatcttcctcggactggacagtcagtttgtgtgt
gtggagagtcttgtgacggccattgtggatatgtaccctaaaaccttccgcgtgggctac
cggagagagctgctcatcctgggcatgtccatagcttcattcttcctgggtctaatcatg
ctgacggagggtggcatgtacgtgttccagctgtttgactcgtatgcagccagtggcatg
tgtcttttgtttgtggccatatttgagtccatctgcattggctgggtttatggcagcgac
aggttttatatgaacattgaggacatgattggatataaacccatcttcttcatcaagtgg
tgctggaagttcttcacaccgggcatctgcacaggcatcttcctcttcttcttgatcaag
tataagccgctgaagtataataatgtgtacacgtatccagactggggttacggcatcggc
tggatgatggccatgtcctcgatggtttgcattcctctggggatcttatttcagatttgg
aaaactaaaggaacgttccgtgagcggatcaagaagctgacgacccccagtgcagacctg
cgtatgaggggccacgtggcctccaggggtccctgcgctatcaatgatgctgatgccaaa
atgagggcggacggcaagatctccaccatcacagagaaggagacgcacttctaa
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