Danio rerio (zebrafish): 100537790
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Entry
100537790 CDS
T01004
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100537790 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
100537790 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
100537790 (clip1b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100537790 (clip1b)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
100537790 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
100537790
NCBI-ProteinID:
XP_021335153
ZFIN:
ZDB-GENE-111111-7
UniProt:
A0A8M9Q6S9
LinkDB
All DBs
Position
10:complement(44391749..44414837)
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AA seq
862 aa
AA seq
DB search
MSSGKPSGIKPPSKIGKPATAPTKTSPTSAGAKAVTSPSSAQDAASDFSVGERVWVNGNK
PGLVQFVGGTQFAPGQWAGIVLDEPIGKNDGSVSGVRYFQCKDLYGIFTRPSKLTRSPVQ
EREPNGTQTPADKTSGPVKEPAAAPQTTTVNTRNSSNLTRTASESASNLSETDSAKKIQR
ELKLGDRVLVGGSKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGGRYFQCLPKYG
LFAPTHKVTRIGFPSTTPAKSKASRRRSTLKNSPSASSVSSLSSVTSSVGGKPSRAGLLT
ETSVRYARKISGTTALQEALKEKQQHIEQLLAERDLERTEVARATSHAGEVQQELALLTQ
AQEQYAVEMEAKLDQLRRLVETADRDKVELMNQLEEEKRKVEDLQFRVEEACITKGDLET
QTKLEHAHIKELEQSLLFEKTKADKLQRELEDTRVATVSERSRIMELEKEVSDLHLQLRT
LRAETSGSASPPLQDKKIKELNSELETRQKELIFLQQKLSASEEQKTSVQQQLHDLKQQF
EAAEEDRNKATLAMQEMEMKLQTERNQLEDLRREQKKEEERKHTQNDEKLKLTTQRNEEL
QEQLELLKQQNTQIQDQLSSETERLRQQIEELKLNAVQRQASLQEEQGTLTEQLDITVRE
NSNALMSDKDKELEMLRNEIAALRGENAMTKTLKSAVTSLEEDKAELLERVKSLEQKLEL
RHTHSGQQSSTEDTTVEQLREEKEFAEGQINFLNSVIVDLQRKNEELKVKLKKMALTEFN
GNEDNDGLVEVKKKKKAPPRVFCDICDCFDLHDTEDCPTQTQSPDSPPHSSYRGRRSDER
PYCDICEAFGHATESCNDDQTF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggggaaacccagcggcatcaagccgcccagcaagatcggtaaaccagctaca
gcaccaaccaaaacctccccgacctcagccggagcgaaggccgtaacctccccgagttca
gctcaggatgctgcgtcagatttctctgtgggcgagcgggtttgggtgaacggaaataag
ccgggtcttgtgcagttcgtcggaggaacgcagtttgctccgggtcagtgggcaggaatc
gttctggacgagcccatcgggaagaatgacggttcagtgtctggagtgcggtatttccag
tgcaaagacctgtacgggatcttcactcgaccctccaaactgacccgcagcccggtgcag
gagcgggagcccaacggcacacagacgcccgccgacaaaaccagcggtcctgttaaagag
cctgccgctgccccgcagaccaccactgtgaacaccaggaactcctccaacctgacccgc
accgccagtgagtctgcatccaatctctctgagacggactcagccaagaagatacagcga
gaactgaagctgggcgatcgagtgctggtcggtggaagcaaagcaggagttgtgcgattt
ctaggtgaaactgactttgcgaaaggagaatggtgtggcgttgagctggatgagccgcta
ggcaagaatgacggagcagtggctggaggaaggtattttcagtgcctcccaaagtacggc
ctgtttgctcctacacacaaagtcacccgcatcgggttcccgtccaccactcctgccaaa
tccaaagcatccagacggcggtcgaccctgaagaacagccctagtgcatcctccgtcagc
tccctcagctctgtcacctcttcggttggaggaaaacccagccgggctggcctgctcaca
gagacgtcggtacggtacgcacgcaagatttcaggaaccacggcgctgcaggaggcgctg
aaggagaaacagcagcacatcgagcagcttctggctgagcgagacctggagagaacggaa
gtggcccgagccaccagccacgccggagaggtgcagcaggagctggcgctgctcacacag
gcacaggagcagtatgccgtggagatggaggccaagctggaccagctgcggagactggtg
gagaccgcagacagagataaagtggagctgatgaaccagctggaggaggagaaaagaaaa
gtggaggatctgcagtttcgggtggaggaagcgtgcattaccaaaggagacctggagacg
cagaccaaactggagcatgcccacattaaggagctcgaacagagtcttctctttgaaaag
accaaagcagataaactgcagagggagttagaggatactagggtggccacagtatcggag
cgctccaggattatggagctggagaaggaggtgtctgatctgcaccttcagctccgcacg
ctgcgggccgagacctccggatccgcatctccacccctgcaggacaaaaagatcaaagag
ctgaactctgagctggagacccgacagaaggagctgatcttcctccagcagaaactcagc
gcttcagaagagcagaaaacatccgtccagcagcagctccacgatctgaagcagcagttc
gaagcagcagaagaggacagaaataaagcaacactggccatgcaagaaatggaaatgaag
ctgcaaacggagagaaatcagctggaggatctgcggagagaacaaaagaaagaggaggag
agaaaacacacacagaatgatgagaagctgaagctgacgacgcagaggaatgaagagcta
caggagcagctggagctcctgaagcagcagaacacacagatccaagatcagctgagctca
gaaacagagcggctccgacagcagattgaggagctgaagctgaatgctgttcagaggcag
gcgtctctccaagaggagcagggaactctgactgagcagctggacatcactgtgagggaa
aactccaatgcactgatgtcggataaagacaaagagctggagatgctgcgaaacgagatt
gcggcgctgcgtggagaaaacgccatgaccaagactcttaaatcagccgtaacgtcacta
gaagaggataaagcagagctgctggagcgagtgaagagtctggagcagaagctggagctc
cgacacacacacagcggacagcagagcagcacagaagacacaactgttgagcagctgaga
gaagaaaaggagtttgctgaaggacagatcaacttcctgaactccgtcatcgtggatctg
cagaggaagaatgaggagctgaaggtgaagctgaagaagatggcgctgaccgagtttaac
gggaacgaggacaatgacggtctggttgaggtgaagaagaagaagaaagctccgccgcga
gtgttctgcgatatctgcgactgttttgacctccacgacactgaggactgtcccacacaa
acacagtcgccggactctcctccgcacagctcgtaccgcggccggcgcagcgatgagagg
ccatactgcgacatctgcgaggcctttggacacgccaccgagtcctgcaatgacgaccag
accttctga
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