Danio rerio (zebrafish): 141380945
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Entry
141380945 CDS
T01004
Name
(RefSeq) cyclic nucleotide-gated channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
141380945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
141380945
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141380945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
141380945
NCBI-ProteinID:
XP_073799097
LinkDB
All DBs
Position
25:complement(18466590..18490481)
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AA seq
848 aa
AA seq
DB search
MPKDQPQSSRDLELDHLVRQSPLYSPRTPSPSSPSSILDLPNVPTYPRLPPIAPSRQLSS
VSNTAFQTEDNPTSARPSVSSRLSVHPAVNVEDVDSELGKGGRRSRPIPPIINLQDTNLK
TLTVPGARKASRTSTHTTLCRDRKPQTIWTKIKRLYSQDDEEEEELDTAVRAWPSQSSIS
SADDGLNQRPASSASQASTVVNERLQELVKLFKERTERVKEKLIDPDNSDDDTPPATPSK
QAPAPPPEPPAEQKAEQEAPEAPAEKEEEKIKFLCFKVTPQSRIGRLLRYRFPASIDPFT
NLFYVLWLFCVSLAFNWNAWMIPVRSTFPYQTPENIHVWLLIDYLCDSVYILDVLAFQPR
LQFVQYGDIVSDKKLMRANYIKTARFKLDVLSLLPLELLYFKTGINPLLRLPRILKFMAF
FEFNKRLEAILTNPYIYRVIRTTTYLLFAVHCNACLYYWGSSYEGLGISEWTYDGAGNSY
IRCYYFAVRALLTIGGLAGPTTLFELVFQLINYFSGVFVFSIMIGQMRDVVGAATAAQTN
YRACVDNTVKYMASYRIPKDVQKRVKTWYSYTWQSQGMLDEQELLDQLPDKMKLDIAVDV
SYSIISKVPLFQGCDRQMIFDMLKRLKSVVYLPGDYVCKKDEVGREMYIIKAGEVQVVGG
PDGKTVFVTLKAGAVFGEVSLLAVGGGNRRTANVVARGFANLFILTKKDLNEIMVHYPES
QKLLRKKAKKMLMKDKKPAEKKGEEKEPVPIIPPRAETPKLLKAALEMTEKSGIRGTWTK
LKDRANRSSVSLQRSISSSAAPNSPVHEPHSDQDADSLSQISDSSMQIPTTPTGTADASI
FAEEDQIK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggatcaaccacagagcagtagggatctggagttggaccatcttgtccggcag
tccccactctattcccctcgtaccccttcaccttcttccccaagctccatcctagacttg
cccaatgtgcccacttacccccgtctgccacccatcgctccttcacgccagttatcaagc
gtctccaacacagccttccaaactgaggacaatcccacctctgctagaccttcagtgagc
tccagactgagtgtgcatccagcagtgaatgtggaagatgttgattccgagctaggaaaa
ggaggaagaaggtctcgccccattcccccaattataaacctgcaagacaccaacctcaaa
accctcactgtgcctggtgcccgtaaagccagtcggactagcacacacacaaccttatgc
agagacagaaaaccacagacaatttggaccaagatcaagaggctttactcacaagatgat
gaggaagaggaagagttagatactgcagtccgtgcctggccaagccagagtagcatctca
agcgcagatgatgggcttaatcagcggccagcatcttctgcaagccaggctagtaccgta
gtaaacgagaggttacaggagctggtcaagctttttaaagagagaacggagcgggtcaaa
gaaaaactaattgatccagacaattcagatgatgacacaccacctgccaccccatctaag
caggctccagctcctcctcctgaacctccagcagagcagaaagcagagcaggaggcgccc
gaggccccagccgagaaagaagaggagaaaataaagttcctatgctttaaagtgacacct
cagtctagaattggccggcttctgcgctaccgttttccagccagcatcgacccctttact
aatctgttctacgtgctctggctgttctgcgtgtctttggcgttcaactggaatgcatgg
atgattcctgtgcgttcaacttttccttatcaaacaccggaaaacatccacgtgtggctg
ttgatagactacttgtgtgatagcgtctacattctggacgtcctggcctttcaaccccga
ctgcagtttgtccagtatggggacattgtgagcgacaagaaattgatgagagctaattac
atcaaaacagcacgttttaagctggatgtgctcagtctacttcctctggagcttctctac
ttcaaaacagggattaatccgctcctccgcttacccagaatcctgaagttcatggctttc
tttgagttcaacaagcgtctggaagctatcttgaccaatccttacatttacagagtcatt
cgaacaaccacttacctgctgtttgccgtccactgcaatgcctgtctttattactggggc
tcttcatacgaaggtctgggtatttcagaatggacctatgatggggcaggtaatagttac
attcgctgttactactttgctgtgagggctctgctgaccatcgggggcctggcaggaccc
accacactttttgagttggtgtttcagctcatcaattatttcagtggagtgtttgtgttc
tccatcatgattggtcagatgagagatgtcgtaggcgcagccactgcggcgcagacaaac
tatcgtgcctgtgttgataatacagtgaagtatatggcctcttaccgtatccctaaagat
gtgcagaagagggtgaaaacctggtacagctacacatggcagtcccaaggcatgctggat
gaacaagaactactagatcaactacctgacaagatgaagctggatattgcagttgatgtc
agctactccattatcagtaaagtgccgctctttcagggctgcgacagacagatgatcttc
gacatgttgaagaggctcaaatcagtggtgtatcttcctggagattatgtctgcaagaag
gatgaagtgggtcgtgagatgtacatcataaaggccggcgaggtgcaggtagtcggcggt
ccggatggaaagacggtatttgtgaccctgaaagcaggagcagtgtttggagaggtcagc
ttgcttgctgtgggtggagggaacagacgaaccgctaacgttgtagctcgaggctttgct
aacctcttcatcttaaccaaaaaggacctgaatgagatcatggttcactatccggagtcc
cagaaactgctccgcaagaaagcaaagaaaatgctgatgaaggataaaaagcctgctgag
aagaagggtgaagagaaggagcccgtcccaattattcctcctcgtgccgagacgcccaag
ctgttaaaagcagcgctggagatgacggagaaatcaggaataagaggaacatggaccaaa
ctgaaggacagggccaacagatcaagtgtctcgctgcagcgctccatctcttcttctgcg
gcgcccaactcaccagtccatgaacctcattcagatcaagacgcagactccctgtctcag
atatcagacagctccatgcaaatccccaccacccccaccggcactgcagacgccagcata
ttcgctgaagaggaccagatcaaatag
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