Danio rerio (zebrafish): 322325
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Entry
322325 CDS
T01004
Symbol
rnf128a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF128a precursor
KO
K10629
E3 ubiquitin-protein ligase RNF128 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
322325 (rnf128a)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
322325 (rnf128a)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
322325 (rnf128a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-Nse
SieB
zinc_ribbon_16
PHD
Motif
Other DBs
NCBI-GeneID:
322325
NCBI-ProteinID:
NP_997780
ZFIN:
ZDB-GENE-030131-1044
Ensembl:
ENSDARG00000016867
UniProt:
Q6NX00
LinkDB
All DBs
Position
5:complement(23677430..23696874)
Genome browser
AA seq
389 aa
AA seq
DB search
MGPLASRDVFSWLLLASVLQVSSVRLAEASYLCTAYLNISYTNPENNRSTWFQEEMGLYG
QDSPKAYVKGNVYLASPTYGCDDDTFYGRPNGSKGWIALIQRGNGCTFTEKINIAAMNGA
AAAIIFNDFGSENRVIQMSHPGTTIVAIMIGNYRGMELVQLLDQGVPVAIAIEVGKQHGP
WMSHYSVFFVSISFFIVTAATVGYFIFYSARRLNSLRQQNRSQKKLKAEAKKAIGQLQVR
TLRQGDQEIGPDADACAVCIDSYKAGDVLSILTCNHFFHKSCIEPWLLEHRTCPMCKCDI
LKALGVELDVEEQPQISVPDFRPFSTSEDLHSETASHTHSETASSGYASMHGNEHLAPPE
GTHNGVQEEPHYDNLAFESDVHNQSEVRT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggggcctcttgccagtcgggacgtgttttcgtggctgttgttggcttctgttctccag
gtgtcgagtgttcgtttggcggaggccagttacctgtgcactgcatacctgaacatttca
tacaccaaccctgaaaataatagaagcacctggtttcaagaggagatggggctgtatgga
caagactcacccaaagcttatgtcaaggggaatgtgtatttagcttctccgacctatggc
tgtgatgatgacaccttttatggccgaccgaacggctccaagggctggatcgccttaatc
caacgcggaaacggctgcacttttaccgaaaaaattaacattgcggctatgaacggggct
gctgctgctatcatcttcaacgactttggatcagaaaatcgggtcattcagatgtcccac
ccaggcacaactatcgttgcgattatgattggcaactaccgcgggatggagctggtccag
ctgctggatcaaggcgttcccgttgctatagcgatagaggttgggaaacagcacggcccc
tggatgagtcactattccgtgtttttcgtctccatctccttcttcatcgtcaccgcggcg
acggtcggctacttcatcttctactccgcgcggagactcaacagtctcagacagcagaac
cgcagtcagaaaaagctgaaagctgaagcaaagaaggcaattggccagctacaggtccgc
acactgagacaaggcgaccaggaaatcggcccggatgctgatgcctgtgcagtttgtatt
gattcgtataaagcaggagatgtattgtcaattctcacatgcaatcatttcttccataaa
tcctgcatagagccatggctgctggagcacagaacctgcccaatgtgcaagtgtgacatt
cttaaagcccttggagttgagttggatgtggaggagcagccacaaatttcagtgcctgat
ttcaggcctttttctacctctgaggacctgcacagtgagacggcctcacacacacacagt
gagaccgcttcctctggatatgcatctatgcatggaaatgaacacctcgctcctcctgaa
ggcacacacaacggtgtgcaggaggagcctcactacgataaccttgccttcgagagcgac
gtccacaaccagagtgaagtcagaacctga
DBGET
integrated database retrieval system
