KEGG   Danio rerio (zebrafish): 393215
Entry
393215            CDS       T01004                                 
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5
  KO
K14961  COMPASS component SWD1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    393215 (rbbp5)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     393215 (rbbp5)
    COMPASS/SET1 complex (yeast)
     393215 (rbbp5)
    MLL-HCF complex
     393215 (rbbp5)
    MLL3/MLL4 complex
     393215 (rbbp5)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 WDR54
Other DBs
NCBI-GeneID: 393215
NCBI-ProteinID: NP_956539
ZFIN: ZDB-GENE-040426-886
Ensembl: ENSDARG00000042147
UniProt: Q7ZUU9
LinkDB
Position
22:complement(769999..784143)
AA seq 512 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLSWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
NKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
DTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DATAQNASTDDGSAHTGPGDKKRHPSADGAPPKKKIRTTTIELQGVPSDEVHPLLGVKGD
SKSKKKAAGRPKGSKGNLVAAVYKQHEVQGLD
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgaatctggagttgctcgagtcgttcgggcagaattatccagaggaggctgatgggact
ctggactgcatcagtatggctctgacctgtacgtttaaccgctggggaacactactcgct
gtcggctgcaatgacggacgcatcgtcatctgggactttctgaccagaggaatcgccaaa
atcatcagtgcacacatacaccctgtgtgctcgctgagctggagtcgggatggtcataag
ctggtcagcgcctccactgataatatcgtctcccagtgggacgtcctgacgggagactgt
gaccagcgcttccgctttccctcccccatcctcaagctgcagtatcacccccgagacatg
aataaggttctggtgtgtcccatgaagtctgcgcccgtcttgctcacgctgtccgactcc
aaacacgtggttttgccggtggacgacgactcggatctgaatgtagtggcggcgtttgac
cgacgcggagagtacatttacaccggaaacgccaaggggaagattctggttttgaacaca
gacactcaggatctggtggcgtccttcagagtgaccactggaaccagtaacaccaccgcc
atcaagtccatcgagtttgctcgcaagggcagttgtttcctcatcaacacagcagatcga
atcattcgagtttacgacggtcgagagatcctgacctgcggcagagacggagagcctgag
cccatgcagaaactgcaggacctggtcaacaggacgccgtggaagcgctgctgtttctcc
ggtgacggcgagtatatcgtggcgggttctgcgcgtcagcatgcgctctacatctgggag
aagagcatcggcaacctggtgaagatcctgcatggcacacgaggagaactgctgctggac
gtagcgtggcacccggtgcggcccatcatcgcctccatctccagcggtgtggtctccata
tgggctcagaaccaagtggagaactggagtgcgttcgcaccggattttaaagagctggac
gagaatgtggagtacgaggagagagagtcagagttcgacatcgaggacgaggacaagagt
gaaccagagcagacgggagcggacgcagcggaggatgaggaggtggacgtcacatcagtc
gaccccattcctgcattctgcagcagtgacgaggagctggaggactataaagctctgctg
tatctgccgatcgccccggaggttgaggacccagaggagaacccgtttggccccccgcct
gacgccacggctcagaacgccagcactgacgacggctccgcccacaccggccccggtgac
aagaaacgacacccgtcagcagacggagcaccaccgaagaagaagatccgcaccaccacc
atcgagctgcagggcgtcccaagcgacgaggtgcacccgctgcttggcgtaaaaggcgac
agtaagtcgaagaagaaggcggcggggcgacccaagggatctaaaggaaacctggtcgca
gcggtgtacaaacagcacgaggtgcagggtctggactga

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