Danio rerio (zebrafish): 393215
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Entry
393215 CDS
T01004
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5
KO
K14961
COMPASS component SWD1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
393215 (rbbp5)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
393215 (rbbp5)
COMPASS/SET1 complex (yeast)
393215 (rbbp5)
MLL-HCF complex
393215 (rbbp5)
MLL3/MLL4 complex
393215 (rbbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
393215
NCBI-ProteinID:
NP_956539
ZFIN:
ZDB-GENE-040426-886
Ensembl:
ENSDARG00000042147
UniProt:
Q7ZUU9
LinkDB
All DBs
Position
22:complement(769999..784143)
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AA seq
512 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLSWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
NKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
DTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DATAQNASTDDGSAHTGPGDKKRHPSADGAPPKKKIRTTTIELQGVPSDEVHPLLGVKGD
SKSKKKAAGRPKGSKGNLVAAVYKQHEVQGLD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggagttgctcgagtcgttcgggcagaattatccagaggaggctgatgggact
ctggactgcatcagtatggctctgacctgtacgtttaaccgctggggaacactactcgct
gtcggctgcaatgacggacgcatcgtcatctgggactttctgaccagaggaatcgccaaa
atcatcagtgcacacatacaccctgtgtgctcgctgagctggagtcgggatggtcataag
ctggtcagcgcctccactgataatatcgtctcccagtgggacgtcctgacgggagactgt
gaccagcgcttccgctttccctcccccatcctcaagctgcagtatcacccccgagacatg
aataaggttctggtgtgtcccatgaagtctgcgcccgtcttgctcacgctgtccgactcc
aaacacgtggttttgccggtggacgacgactcggatctgaatgtagtggcggcgtttgac
cgacgcggagagtacatttacaccggaaacgccaaggggaagattctggttttgaacaca
gacactcaggatctggtggcgtccttcagagtgaccactggaaccagtaacaccaccgcc
atcaagtccatcgagtttgctcgcaagggcagttgtttcctcatcaacacagcagatcga
atcattcgagtttacgacggtcgagagatcctgacctgcggcagagacggagagcctgag
cccatgcagaaactgcaggacctggtcaacaggacgccgtggaagcgctgctgtttctcc
ggtgacggcgagtatatcgtggcgggttctgcgcgtcagcatgcgctctacatctgggag
aagagcatcggcaacctggtgaagatcctgcatggcacacgaggagaactgctgctggac
gtagcgtggcacccggtgcggcccatcatcgcctccatctccagcggtgtggtctccata
tgggctcagaaccaagtggagaactggagtgcgttcgcaccggattttaaagagctggac
gagaatgtggagtacgaggagagagagtcagagttcgacatcgaggacgaggacaagagt
gaaccagagcagacgggagcggacgcagcggaggatgaggaggtggacgtcacatcagtc
gaccccattcctgcattctgcagcagtgacgaggagctggaggactataaagctctgctg
tatctgccgatcgccccggaggttgaggacccagaggagaacccgtttggccccccgcct
gacgccacggctcagaacgccagcactgacgacggctccgcccacaccggccccggtgac
aagaaacgacacccgtcagcagacggagcaccaccgaagaagaagatccgcaccaccacc
atcgagctgcagggcgtcccaagcgacgaggtgcacccgctgcttggcgtaaaaggcgac
agtaagtcgaagaagaaggcggcggggcgacccaagggatctaaaggaaacctggtcgca
gcggtgtacaaacagcacgaggtgcagggtctggactga
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