Danio rerio (zebrafish): 393417
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Entry
393417 CDS
T01004
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04141
Protein processing in endoplasmic reticulum
dre04210
Apoptosis
dre04217
Necroptosis
dre04218
Cellular senescence
dre04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
393417 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
393417 (capn1a)
04217 Necroptosis
393417 (capn1a)
04218 Cellular senescence
393417 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
393417 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
393417 (capn1a)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
393417 (capn1a)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C2: calpain family
393417 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_8
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
393417
NCBI-ProteinID:
XP_068081046
ZFIN:
ZDB-GENE-040426-1263
Ensembl:
ENSDARG00000052702
UniProt:
A0AB32U468
LinkDB
All DBs
Position
13:complement(46262567..46306575)
Genome browser
AA seq
705 aa
AA seq
DB search
MFSYGGISAHISANRLKADGAGSFEQALHFQNQDYEALRQECLEGGYLFEDPCFPAEPPS
LGFKELAPHSSKTRDVEWMRPTELCDDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIISKALDRGSL
LGCSIDITSAFDMESVTFKKLVKGHAYSVTALKQVEYRGRMERLIRIRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFGEFLRQFSRLEICNLTPDALSDDDMSHWN
TIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALMQKDRR
RYRRHGQDMHTIGFAIYEVRSQWYTGCQNVHLKKDFFLSNSSAARSETFINLREVSTRLR
LPPGEYIIVPSTFEPSKEADFVLRVFTEKQSETEELDDEISADLEDEEEITEDDIDDSFK
SLFAQLAGEDMEISVHELKTILNRVVSKHKDVKTDGFSMDSCRTMVNLLDKDGSARLGLV
EFQILWNKIRKLLGIFREFDIDKSGTMSSYEMRLAVESAGFKLNNRLNQILVARYAENEA
IDFDNFVCCLIKLEAMFRSFQQLDREETGTAEMNLSEWLFMTMCG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatacggcgggatctcagcacacatcagcgctaacagactgaaggcggatggc
gcaggctcttttgagcaggctttacacttccagaaccaggactacgaggccctcagacag
gagtgtttagagggaggctacctgtttgaagacccctgtttccccgccgaaccgccctct
ctgggcttcaaagagctcgccccgcactcctccaaaacccgagatgtggagtggatgcgc
cctacggagctctgtgatgatcctcagttcattgttggaggagccacacgcacagacatc
tgtcaaggagctctgggtgactgctggctcctcgctgcgattggctcgctgactcttaat
gaaagactccttcacagggttgtccctcatggccagagctttcaagatgactatgctgga
attttccactttcagttctggcagttcggtgaatgggtggacgttgtgatcgatgatcgg
ctcccggtcaaagacggagagctcatgtttgtccattcagcagagggaaatgagttctgg
agtgccttggtggaaaaagcctatgctaagctaaatggctcttatgaagctctttctgga
ggctctaccactgagggttttgaggattttactggaggcgtttcagaaatgtacgagctc
cggaaagctccaagagacttgtaccgaatcatcagcaaagccctggacagaggctccctg
ctgggctgctctattgatatcaccagtgcctttgacatggagtctgtgacatttaagaag
ctggtaaagggtcacgcttactccgtgactgctctcaaacaggtggagtacagggggcgg
atggagaggcttatccgcatccgtaatccttggggtcaggtagaatggaccggagcctgg
agtgataactctcctgaatgggatgagattgatccatcagagaaggacgacttgcactta
caaatggaggatggagagttttggatgtcatttggtgagtttttacgtcagttctcccgg
ctggagatttgcaatctgacccctgatgctctgagtgacgatgatatgagccactggaac
accatcaagtttcatggagcctggaggagaggaagcactgcaggaggatgccgaaatcat
cccaacacgttctggatcaatccacagtataagatcacactgctggaggaagatgatgat
ccggaggatgaagaagtggcctgcagcttcctggtggctttaatgcagaaagaccgcaga
cggtaccgccgccacggacaagatatgcacactatcggttttgcaatttatgaggtcagg
agccaatggtacacaggctgtcagaacgtgcaccttaagaaggatttcttcttgagcaac
tcatcagctgctcgatccgagaccttcatcaacctgcgggaggtgagcactcgcctgcgt
ctgcctcctggagaatacatcatcgtcccctccaccttcgagcccagcaaagaggccgat
tttgtcctgagagtcttcaccgagaaacagtccgagaccgaggaattggatgacgagatt
tcagctgacctggaggatgaggaagaaattacagaagatgacattgatgactcctttaag
tccctgtttgcccagctggctggagaggatatggagatatctgttcatgaactcaagact
attctcaacagagtagtctccaaacacaaagatgtgaagacagacggcttcagcatggac
tcctgcagaacgatggtcaacctcctggataaagatgggagcgcacgtttgggcttagtc
gagtttcagatcctctggaacaaaataaggaagttgctggggatcttcagagagtttgat
attgataagtcaggaactatgagctcttatgagatgcgtctcgctgtagaatcagcaggc
tttaaactcaataacagactcaaccagatcctggtagccagatatgcagagaacgaggcc
attgattttgataacttcgtctgctgcttgatcaaactagaggccatgttcagatctttt
caacagctggacagagaagaaacaggaacggctgagatgaacctatctgagtggctcttc
atgaccatgtgtggttga
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