KEGG   Danio rerio (zebrafish): 406768
Entry
406768            CDS       T01004                                 
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04141  Protein processing in endoplasmic reticulum
dre04210  Apoptosis
dre04217  Necroptosis
dre04218  Cellular senescence
dre04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    406768 (capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    406768 (capn1)
   04217 Necroptosis
    406768 (capn1)
   04218 Cellular senescence
    406768 (capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    406768 (capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dre01002]
    406768 (capn1)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     406768 (capn1)
Peptidases and inhibitors [BR:dre01002]
 Cysteine peptidases
  Family C2: calpain family
   406768 (capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh EF-hand_5 LPD26
Other DBs
NCBI-GeneID: 406768
NCBI-ProteinID: NP_998624
ZFIN: ZDB-GENE-040426-2814
Ensembl: ENSDARG00000045199
UniProt: Q7ZUR1
LinkDB
Position
7:complement(6432513..6503990)
AA seq 704 aa
MEPICATGMAARLRSQWDRDAGLGQNHNAVKFLGQDYETLRAQSQQSRRLFEDPMFTASS
SSLGFNELGPRSSKTQGVRWMRPKEMCARPQFIVDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQDFDSRYAGIFHFQFWQFGEWVDVVIDDRLPTKDGKLLFVHSAEGGE
FWSALLEKAYAKLNGCYEALSGGSTCEGFEDFTGGVTEMYELKKAPADLFSIIGRAIERG
SLLGCSIDITSKFDMEAVTFKKLVKGHAYSVTGAEEVVYRGNMTKLVRIRNPWGEVEWTG
AWSDNSREWDNVDRSVRGRLQNRSEDGEFWMSFSDFLREFTRLEICNLTADALQASQVKK
WSTANYNGEWRRGSTAGGCRNYPATFWNNPQFKVALKHPDSPGQSECSFLVALMQKDRRK
KRREGQDMETIGFAIYEVPREFLGQSGVHLKRDFFLTHASSARSELFINLREVSSRFRLP
AGEYIIVPSTFEPNKEADFVLRVFSEKPANSEEMDDKVMAEIPEEQRLDESQIDAGFKSL
FRQLAGADMEISVTELQTILNRIIAKHKDLKTDGFGKESCRSMINLVDTDGSGKLGLVEF
HVLWEKIKRYLQIFRDHDVDKSGTMSSYEMRKALETAGFKLNNHLFQLIILRYTEEDLSV
DFDNFVSCLVRLETMFKTFKSLDTDADGVISLTFFQWITLTMFA
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggagcccatctgcgccactggaatggctgcgaggctgcggagtcagtgggatcgagac
gcgggtttgggtcaaaaccacaacgctgtcaagttcttgggtcaagattacgagacgctg
agagctcagagccagcagagcagacgactgtttgaggatccaatgttcaccgccagcagc
tcttctctgggcttcaatgaactcggcccgcgatcctccaaaacacaaggagtgcgctgg
atgagacccaaggaaatgtgtgcgcgtcctcagtttatcgtggatggagccactcgcaca
gacatctgtcagggagcgctgggtgattgttggctgctggctgctatcgcgtccctgact
ctgaatgataatctgctgcatcgcgtggtgccgcacggacaggactttgacagcagatat
gcaggaatattccacttccagttctggcagtttggtgaatgggtggacgtggtgatcgac
gaccggctgccgacgaaggatggcaaactgttattcgtgcactcggcggagggtggagag
ttctggagtgctctgctggagaaggcctacgccaagctgaacggctgttacgaggctctg
tctggaggcagcacgtgtgaaggcttcgaggatttcaccggtggagtgacagagatgtac
gagttaaagaaagctcccgctgacctcttcagcattattggccgcgccatcgagagaggc
tcgctgctgggctgctctattgatatcaccagtaagtttgacatggaggcggtgaccttt
aagaagctggtcaaaggccacgcatactctgtgaccggagcagaagaggtggtctacagg
gggaacatgaccaaactggtgcgcatcaggaacccgtggggggaagtggagtggactgga
gcctggagcgacaactctcgcgaatgggacaatgtggaccgctccgtccggggccgatta
cagaaccgcagcgaggacggagagttctggatgtcgttcagtgattttctgcgcgagttc
acccgtttggaaatctgtaacctgacggcggacgctctccaggccagtcaggtgaagaag
tggagcaccgccaactataacggcgagtggaggagaggaagcactgcaggtggctgcagg
aactatccagcaacattctggatcaacccgcagttcaaggtggccctgaaacacccggat
tctcccggccaatcagagtgcagcttcctggtggcgctgatgcagaaggaccgcaggaag
aagagaagagaagggcaggacatggagactatcggattcgccatttatgaggtgccaaga
gagtttctaggtcagtctggtgttcatctgaagcgggatttcttcctcacacacgcgtcc
agcgctcgatcggagctcttcattaacctgcgggaggtgagctcccgtttccggctgccc
gcgggcgagtacatcatcgtcccgtccaccttcgagccaaacaaagaggccgatttcgtg
ctcagagttttctcagagaagcccgccaactcagaagaaatggatgacaaagtcatggct
gaaattcctgaggagcaacgtcttgatgagagtcagattgacgctggttttaagagtctg
ttcagacagctggctggagcggacatggagatcagtgtgacggagctacagacgatcctg
aacagaatcatcgccaaacataaagatttaaagacagacggctttggtaaggagtcgtgt
cggagtatgatcaacctcatggacacggatggcagtgggaaactcggactcgtagagttt
catgtgttgtgggagaagattaaacgctacctgcaaatcttccgcgatcacgatgtggat
aaatcaggcactatgagctcgtatgagatgaggaaagctctggaaactgcaggatttaag
ctgaacaatcatttattccagctgatcatcctgcgctacactgaggaggatctttccgtg
gattttgacaactttgtgtcctgtttagtgcgactggagaccatgttcaagacgttcaag
agtctggacacagacgctgatggagtcatttcactcacattcttccagtggatcaccctg
accatgtttgcctga

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