KEGG   Danio rerio (zebrafish): 445066
Entry
445066            CDS       T01004                                 
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase 1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    445066 (usb1)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    445066 (usb1)
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 445066
NCBI-ProteinID: NP_001003460
ZFIN: ZDB-GENE-040801-197
Ensembl: ENSDARG00000003841
UniProt: Q6DEF6
LinkDB
Position
25:13677325..13686752
AA seq 276 aa
MIVNYSSSSSEEESGSSSSPSGKRQKLDTETSEALDHGSAQRKVCKSSHLTPRLPLPESV
KEMFRDSEELWTDKSEEHGGRLRSFQHERGNWATYVFFPYDPEEAFLEVLNKMMAAAEAH
DIPLTVSEEFHLSLSKTVVLRHHWIQPFVQSIRTSLTHFQKFYCVAYKLKVYSNAEKTRT
FLGMEVSTGTPHLLELSKIVDETMKEFNLSTFYEDPSFHISLAWCVGDQTERLKKACLLE
LQGLIDAHEDGPFHARLNCNELRCKTGNKVFVFPLQ
NT seq 831 nt   +upstreamnt  +downstreamnt
atgattgtcaattacagtagcagcagttctgaagaggaatctggaagctcttcatcacct
tcagggaaaaggcaaaaactagacactgaaaccagtgaagctctggatcatggatctgct
caaagaaaagtgtgtaaatccagccacttgacgcctcgtctgcctcttcctgagagtgta
aaggagatgttcagagattcagaagaactgtggactgataaaagtgaagaacatggaggt
cgactgcgctccttccagcacgagcgaggaaactgggccacatatgtcttctttccttat
gatcctgaggaggcctttctggaagtgctcaataaaatgatggcagctgcagaagctcac
gacatccctctgacagtttctgaagagtttcacctcagtctctcaaagaccgtggtcctg
cgccatcactggattcaaccatttgtccagtctattcggaccagtctgacacacttccag
aagttttactgtgtggcctataaactgaaggtgtattctaatgctgaaaagacgaggact
tttcttgggatggaagtctccactggaacgcctcacttgcttgagcttagcaaaatagtg
gatgaaaccatgaaagaattcaaccttagcaccttttatgaggatccttctttccacata
agtctcgcttggtgtgtgggggatcaaacggaaaggttgaaaaaggcatgtttattagaa
ttgcagggtcttattgacgctcatgaagatgggccattccatgcaaggctaaactgcaac
gagcttcgctgcaagacaggaaataaagtctttgtttttcccctccaatga

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