Danio rerio (zebrafish): 449918
Help
Entry
449918 CDS
T01004
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
449918 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
449918 (cnot10)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
449918 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
ARM_TT21_N
TPR_14
ARM_TT21
TPR_8
TPR_7
Paf67
NagJ_C
TPR_10
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
449918
NCBI-ProteinID:
NP_001071000
ZFIN:
ZDB-GENE-060929-368
Ensembl:
ENSDARG00000058528
UniProt:
Q08CL8
LinkDB
All DBs
Position
16:8037402..8064749
Genome browser
AA seq
624 aa
AA seq
DB search
MKHDIASSPGMSDLEKEVATNAFEAFKTGSYDESLKYLDNLQELNKEDYKITMNKTVTEF
YKSGQTTSSTNKESAALKAEFTAMIEAAKSKMHQYKVRAYIQMKSLKACKREIKSVMNTS
GNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECVRCMFWNNLGCIHFAM
GKHNLGLFYFKKALQENDHTCAQIGDGSNAQASKKFSGIPMCALLANKRYELLYNCGIQL
LHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQETKGLPSKKGIVQAVV
GQGYHRKIVLASQSTQNTIYSEAQSAAIPVASMEFAAICLRNALLLLPEHQQHDSKPDNG
SKSYSQSGGTESGSETSDACSGKTQEGDKFIPAAPSSPLRKQEVENLRCSILACSAYVAL
ALGDNLMALNHAEKLLHQAKLSGSLKFLGHLYAAEALISLDGISDAIAHLNPENVTDVSL
GVSSSEQDQGSDKGDLEPVESSGKQTPLCYPSSVSSARATMLFNLGSAYCLRSEYEKARK
CLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPSVKPGSSPDFRKKP
LSFQSTQPVQPIQTPSSFTQVQRK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgacatcgcttcatcccctgggatgtcggatttagagaaagaggttgcaacc
aatgctttcgaggcgtttaagactggaagctatgacgagtctctgaaatatcttgacaac
cttcaggagctgaacaaagaggactacaagattacaatgaacaaagcggtcactgagttt
tataaaagtgggcagacaacaagcagcacaaataaggaatctgctgctctgaaagcagag
ttcacagctatgattgaggccgctaaatcaaagatgcaccagtataaagtgcgagcctat
atccagatgaagtccctgaaggcctgcaaaagggaaatcaaatctgtgatgaacacatct
ggaaattctgcaccatcgctcttcctgaagagtaattttgagtatttgaggggaaattat
cgtaaagctgtgaaattactcaacagttcaaatattgcagagcacccaggaccactgaaa
acaggtgaatgtgtgaggtgtatgttttggaataacctgggctgtatccattttgccatg
gggaagcacaaccttggtctgttttactttaaaaaagcacttcaagaaaatgaccacaca
tgcgcccagattggcgacggcagtaatgcgcaggcatctaagaagttcagtggtatcccc
atgtgtgctctgttagcgaataagcgctatgagctgctgtataactgcgggattcagcta
ctccatattggccgaccgctggcagcgtttgagtgtctgatggaggctgtacaggtgtat
cactccaaccctcgactctggctaagactggcagagtgctgcatcacagctaataaaggg
agttcggagcaggaaacaaaaggtttacccagtaaaaagggcatcgtgcaggcggttgtt
gggcagggctaccatcgcaagattgttctagcatcacagtccacacaaaacaccatctac
agcgaggcgcagtcggcagctatcccagtggccagtatggaatttgcagcaatctgtttg
cggaatgctttactcctgctgccagagcatcaacagcacgacagcaaaccagacaacggc
tccaagagctacagtcagtcaggcggcacagaaagcggcagcgagaccagcgacgcctgc
agtgggaaaacccaggaaggggacaagttcattcctgctgccccctcatcgcccttgaga
aagcaggaagtggagaatctcaggtgctccattctagcctgcagtgcgtatgtggcactt
gctcttggggacaacttaatggctcttaaccacgcagaaaagctcttgcatcaggcaaaa
ctgtcaggatcgctcaagttcctgggtcacctatatgctgctgaagccctgatctcgctg
gacaggatttctgatgctattgcacatctcaacccggagaacgttactgacgtctcgtta
ggggtgtcatccagcgaacaggaccaaggttctgataaaggagatctggagcctgtggag
tcctcagggaagcagacgcctctatgttaccccagctctgtaagctctgcccgtgccaca
atgctcttcaacctgggcagtgcatattgcttgaggagtgaatacgagaaagcccgcaag
tgccttcatcaggctgcttcaatggtgaacactaaagagattcccccagaagctatatta
ctgggcgtctacttagagctgcagaacggaaacacacagctagctctacagatcatcaaa
cgcaaccagctcctcccctccgtcaagcccggctcttctccagacttccggaagaaaccg
ctttctttccagtcgactcagcctgtacagcccatccagaccccttcgtccttcacacaa
gtacagcgcaaatga
DBGET
integrated database retrieval system
