Danio rerio (zebrafish): 550347
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Entry
550347 CDS
T01004
Symbol
ttc5
Name
(RefSeq) tetratricopeptide repeat protein 5
KO
K24928
tetratricopeptide repeat protein 5
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
550347 (ttc5)
Membrane trafficking [BR:
dre04131
]
Autophagy
Other autophagy associated proteins
Others
550347 (ttc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC5_OB
TPR_2
TPR_1
TPR_11
TPR_8
ChAPs
TPR_9
TPR-S
Motif
Other DBs
NCBI-GeneID:
550347
NCBI-ProteinID:
NP_001017654
ZFIN:
ZDB-GENE-050417-137
Ensembl:
ENSDARG00000013329
UniProt:
A0A8M1N5G5
Q567H0
LinkDB
All DBs
Position
7:19520615..19530715
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AA seq
449 aa
AA seq
DB search
MLKMAEVDNDGEQKTTDKDDLQVLKELVDDLYSFRDRYFETHSVEDAGRKQNDVAQEMAK
TLKRLEEKADLYKHSAQFLLLRGRCLNVAPEFSQAAEECLSRAVKLEPGLVEGWNTLGEQ
YWKKGDLTAAKTCFTGALQQSKNKVSLRSLSMVLRQLPPEGDAQEQSKRILESVDLARHA
VQLDVTDGTSWYILGNAYISMFFTSGQNPQLSQQALSAYAQAEKIDKASSMNPDLHFNRA
TLFQYEEMFSSALGGYSRAAALDPAWENAQEREKQLLNYLDQVTILLENKGKIKARRLRN
MLSSLSTSALGPCSSPQFRSPSGRVGSLEPRSLSSLTHGHNSGVAALGKVVFSLASEGRM
AFTFGMVDSEETYCVVMVYNTADSWGVLIGDTVVIPEPQVKRHSVTHKDKSYDFRSIRVD
SPLLLIVNGKRQVMKSQSAAFVTYKPQSE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagatggccgaggttgacaatgatggagagcagaaaacaacagacaaagatgat
ttgcaggtgttaaaggagctggtagatgatctgtactcctttagggaccgttactttgag
actcacagcgtcgaagatgctggtaggaaacagaatgatgttgcccaggagatggcgaag
acgcttaagaggctggaagaaaaagcagacttgtacaaacacagtgcccagttcctgctg
cttcgaggtcgatgtttaaacgtggctcctgaattcagtcaggcagcagaggagtgtctg
tcccgggctgttaaactggaaccaggtttagttgagggctggaacacactgggagagcag
tactggaaaaaaggagaccttacggctgccaagacctgcttcaccggtgcactacaacag
agtaagaataaagtgtctctgagaagtctgtcaatggtcctgcgacagctacctccagaa
ggagatgctcaggagcagagcaaacgcattttggagagtgtggatctggccaggcacgct
gtgcagctcgacgtcactgatggcacttcatggtatattttaggaaatgcatacatctcc
atgtttttcaccagtggacaaaacccacagctctcgcagcaggctctcagtgcatatgca
caggctgagaaaatcgacaaggcatcctcaatgaatcctgacctgcactttaacagagct
acgttgttccagtatgaggagatgttcagttcagctctgggtggatacagtcgagctgct
gctctagatcctgcctgggaaaatgctcaggagagggaaaaacagctgctcaattacctg
gaccaggttacaatcttattagagaacaagggaaaaataaaagctcggcgtcttcgtaac
atgctgtcgtccctcagtacctccgctttgggcccctgctcctcccctcagttccgctct
ccttcaggtcgtgtgggaagccttgaaccccgcagtttatccagtcttactcacggccac
aactctggggtggcagcgctggggaaagtggtcttcagcctggcctctgagggtcgtatg
gccttcacattcggcatggtggacagtgaggagacctattgtgtagtcatggtgtataat
actgcagacagctggggtgttttaataggggatactgtagtcattcctgaaccacaggtc
aaacggcacagcgtaacgcataaagataagtcctatgacttccgaagtatacgtgtggac
tctcccttgctcctcatagtaaatgggaaacgacaagtgatgaaaagccaaagtgcagcc
tttgttacttacaaaccacagagtgaatga
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integrated database retrieval system
