Danio rerio (zebrafish): 559477
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Entry
559477 CDS
T01004
Symbol
aatF
Name
(RefSeq) protein AATF isoform 1
KO
K14782
protein AATF/BFR2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
559477 (aatF)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
90S particles
Other 90S particles
559477 (aatF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AATF-Che1
TRAUB
Motif
Other DBs
NCBI-GeneID:
559477
NCBI-ProteinID:
NP_001077297
ZFIN:
ZDB-GENE-030131-9654
Ensembl:
ENSDARG00000025467
UniProt:
F1R1W8
LinkDB
All DBs
Position
5:61608123..61636584
Genome browser
AA seq
569 aa
AA seq
DB search
MAASISQQLEDLLNPLPHFVDPEDDQDEDTKAKVIEKFDEGGDENDEELLPGHLRKRSGA
ILADGDQRYRGKATSRKDLQKDLDGSADEDDDDNDDGVDDEDESGMLEKYMECMDDDDDN
DDDDDDDDDDDDDDVEHQNDDDEDLVGDDGSQMSSLVSKMKGTDFMKLTEGLDDLGDSDE
DEETADSEEEEGESDEGSEEEMEEEEESGLRTFSKEKVDEEVEKGRAVKNQLALWDLMLE
RRIKMQKALVTANQLPQPQTFSEFKSRGGAEYADALKNSHKALKALQRSLLELQDLLLHQ
NKETRAISQGKTWGDGSSAKDDDEEINSEDDMDENEGDDQEVEQKAARNGPPKRKLEMAD
YPNFMAKRFAAFQPYRDTTLQKWYDKTRLTTGKNNKGFGAFDRNILTQVEQVLMDKERLV
RRTQTRRSEYRVLGKPEPVTPEIDNTISEGEVAELAVKANMHLKDLDENIFDDDDFYHQL
LRELIERKTSATDPNDQVAMGKQWLAIQKLRSKIKKKVDTKASKGRKIRFHVHSKLMNFM
APMDNSSMSDDARSELFRSLFANGPVTTQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccatatcacagcagctcgaggatttgttaaatcctttaccacacttcgtg
gaccccgaggacgaccaagatgaagacaccaaagcgaaagtcatagagaagtttgatgaa
ggaggtgatgagaacgatgaagagcttttacctggtcatctgcggaaacgctctggggcc
attctggctgatggtgaccaacgatatcgtggaaaggcaacatccagaaaagacctacag
aaagatttggatggatcagcagatgaagatgatgatgataatgatgatggtgttgatgat
gaagatgaaagtggaatgctggaaaagtacatggaatgcatggatgatgatgatgataat
gatgatgatgatgatgatgatgatgatgatgatgatgatgatgttgagcatcaaaatgat
gatgacgaggatctcgttggagatgatggttcacagatgtccagcttggtctccaaaatg
aagggcacagattttatgaaactcacagagggattggatgacctgggagacagtgacgaa
gatgaggaaactgctgacagtgaagaagaggaaggagagagtgatgaaggctccgaggag
gagatggaagaagaggaggaatcaggcttgaggaccttctcaaaagagaaagtcgatgaa
gaggttgaaaaagggagagccgtgaaaaatcagcttgccctttgggacctgatgcttgaa
aggcggatcaaaatgcagaaagctcttgtgacagccaatcaacttccacaaccacaaaca
ttctcagagttcaagagcaggggaggggctgaatatgctgatgctttgaaaaatagtcat
aaagctctcaaggctctacaaaggtctctgctggaacttcaagatctgctgctccaccaa
aacaaggaaacaagagccatctctcagggcaaaacctggggggatggcagcagtgctaaa
gatgatgatgaagagattaatagtgaagatgatatggatgaaaatgaaggtgatgaccaa
gaggtagaacagaaagcagctcgaaacggacctcccaaacgaaaactggaaatggcagat
tatcccaactttatggccaaacgctttgctgcatttcaaccgtatcgtgatactactctc
cagaaatggtatgacaagacacggctaacaacggggaagaacaataagggttttggagca
tttgacaggaacatcctgacgcaggtggaacaggttttaatggacaaagagaggctggtg
aggcgtacacagacgcgcaggtctgaatacagagtcctggggaaaccagagccagttact
cctgaaatagacaacaccatctcagagggagaggtggctgaactggcagtaaaagccaac
atgcacctcaaagatctggatgagaacatttttgatgatgatgatttttatcatcagctt
ctccgagagcttattgagcgcaaaacaagtgcaacagaccccaatgatcaagtggccatg
ggaaagcaatggcttgctatccagaaactgcgtagtaaaatcaagaagaaggtggacacc
aaagccagcaaaggcagaaaaatcaggtttcacgttcacagtaagctgatgaattttatg
gctcctatggacaacagcagcatgagcgatgatgcacggtctgagctgtttcgttccttg
tttgcaaatggtccagtgacaacacaatga
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integrated database retrieval system
