Danio rerio (zebrafish): 562264
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Entry
562264 CDS
T01004
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
562264 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
562264 (arhgef18b)
Membrane trafficking [BR:
dre04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
562264 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
562264
NCBI-ProteinID:
XP_068072537
ZFIN:
ZDB-GENE-070705-462
UniProt:
A0AB32TGC8
LinkDB
All DBs
Position
22:complement(10463433..10568735)
Genome browser
AA seq
1541 aa
AA seq
DB search
MADPPLHNSWPSFSWMKRWSFKRASDCKPCTQVRIPVSAPSSSSSLSPASIPEDVFFSSS
PEEKRNFLAESDECSSEEDLLDLCPSLRDSEYFRDLQLGSTEPPNTQPTALNAPNKSPTS
LIPLLSTPESESDQDFTESDTQQLLQIDHTLISSMDRLIAVKTSESQDYPPSDQDEDSDM
DTFPILVRSMSTSRRHSWECPVSPIDLGRRFSLDTAGIDSDGEREVQCLAKSSLLPSSSF
SESSVEEATSAVESESPKTQRQQPSTPTKTIYSRSEILATDEKSQAERVSRILETSKQAA
REAGEKHESEEGLQSGEGRSHVLMVQKVLQELKQYHGAKRRNSSTDRKEVTGNFTWYEFL
AHENDEEEEDRPERPERGTKVKRTLSSLRNRMTGSFNKDKGKNREKEQHKEKGREREKDR
EKELSERVKVRRRSVSGHQLVPGSFSSCATCTLCSKTLQRKHGLQCLNCAVNVHKSCKNL
LPECKSKAKDSAQKTSNGAAQLNSQALRDPCTALTPIDGSSRLSRCSAGMTVPHKGPSAQ
PASSSNPSASQNSSSSGSITGEMDEIDAFRVRRPADDTVSLASTVPESLIVEDAHYATVR
SELEALAQDFEVESWSLAVDQHFSKTHSKEAIKRQDVIYELIQTEIHHVRTLKIMLRVYA
RELREALQLDERRLDCLFPRLDSLLELHNHFLSRLRERRVESLQPGSERNYAINKLSDIL
ISQFSGELGDRMKESYGDFCSRHTEAVNHYKEQLQSNKKFQNLMRKLSNLSIVRRLGVPE
CILLVTQRITKYPVLLERILHNTEAGTEEHEGLAQALGLIKDVIVQVDAQVSLYEKEARL
REIASKMEPKSLGKIKDGRVFRKEDLSQGRRKLLFEGTVNWKAASGRLKDILALLLTDVL
VLLQEKDQRYVFSTVDNKPSVISLQKLIVREVAHEERAMFLICASSNEPEMYEIHTASKE
DRNTWITHIRQAVESCPHTEERLFSEEEEARVARVREYQERLALKDAQITQSLAEKLQLF
AELSECVAGLEDSGSRSRLLLRGDTSDLQQGETLLKAAITEVENLQNLLTSRVRGTSAQT
EGNQSPSLSLLPRRADTFGGYDSNSSALPKNGSIKKKGPGAGGRTRDRSQRASSDPQLKE
VFTCQDHDELDEASSPASTNMWSSCKLPESELYERVLLLSQRLYSLQAIISQQDSHIELQ
RASILTAERERPGSRTRGTDVLLEQEKQRNLEKHREELANFQRLQSQHRQEQARWERERE
KQRRLAEADQQRLKEREEECRRLETRLAEERLELERQRQTYQQDLERLRESTRAVEKEKE
RLEQQRKLKKHNTVPNTAALYTQELTQLSTSSSFNGEFLLGGAGEQTHPQKSLLRASLSA
SPADYPERPEVHSRRESSCNTLPAKTEVPIHLISTTNQLHKQGSVQQQIPTKLAALSKGK
EKSGKGKSSHRTDSLASVDMKQMLPIKLSARDSDGGHKTRRPISPHQPQHSHSDSLSPPD
AYSDAQSSLAPALPKTHNQTSQQTLPYTVSDEAAKEDVIFF
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccacctctccacaactcctggccctctttctcctggatgaagcgatggtcc
ttcaaaagagcttcagattgcaagccatgcactcaagttcgtatcccagtctcagcgccc
agctcttcctcttccttgtccccggcctccattccagaagacgtcttcttcagcagttct
cctgaggagaagaggaacttcttggctgagagtgacgagtgcagcagtgaggaggacctt
ttagacctctgcccttccctgagagattcagaatatttcagagacctgcaactcggatca
accgagccaccaaacacacaacctacagccttgaacgcacccaacaagagtcctacttct
ttgatacctcttctgtcgacaccagaaagcgaatccgaccaggatttcacagagtcagac
acccagcaacttttgcagatagaccacactttgatttccagcatggatcgcttgattgct
gtcaaaacctcagagtctcaggattatccgccgtcggaccaagatgaggactcagacatg
gatacctttcctatattggttagatcaatgtccacatctcgtaggcacagctgggaatgt
ccagtgtctccgattgaccttggaagaaggttcagcttagacactgccggaattgacagc
gatggggaaagagaagtccagtgtctggccaaaagttcccttttaccatcatcctccttc
tccgaaagttcagtggaagaagcaaccagtgctgttgaaagtgaaagtcctaaaacacaa
cgacagcagccgtccacaccaacaaagaccatttattccagatctgagattctggcgact
gatgaaaaatcgcaagctgaaagagtatcccgcatactggagacttccaagcaggctgcc
agagaggccggagaaaagcatgagtctgaagaggggctgcagtctggagagggacggagt
cacgtgctgatggtacagaaagttctacaggagcttaagcagtatcatggggcgaaacgc
agaaattcaagcactgacagaaaagaggtgactgggaacttcacatggtatgagtttctg
gcccatgaaaatgacgaggaagaggaggatcggccagagcgtccagaaagaggcaccaaa
gtcaagcggactctgagttcactgaggaaccgcatgaccggatccttcaacaaagacaaa
ggtaagaatcgtgagaaggagcagcacaaagaaaagggcagagagagagaaaaggataga
gagaaagagttgagcgagcgtgtgaaagtgcgccggcgcagcgtcagcggccaccagctc
gtgcccggatctttctccagctgcgccacatgtacactgtgcagcaaaaccctgcagagg
aagcatggcttgcagtgtttgaactgcgctgtgaacgtccacaagagctgcaagaacctg
ctgcccgagtgcaagagcaaggcgaaagattcagcgcagaagacgtcaaacggcgcagct
cagttgaatagtcaagctctgagagacccctgcactgctctgacccccatcgatggctca
tcccgcttgtcccgctgctctgcaggtatgaccgtaccacacaaaggccccagcgctcag
cccgcctcctccagcaacccctcggccagtcagaacagcagcagcagcggctccatcaca
ggagagatggatgagattgacgcgttcagagtgagacgtcctgctgatgacaccgtctct
ctggcctccacagtgcccgaatcactcatcgtcgaagatgcacattacgccacagtgcgg
agtgaactggaagccctcgcacaagacttcgaggtggagtcctggagtttggctgtggat
cagcacttctcaaaaacacattcaaaggaagccatcaagagacaggacgttatatatgag
ctcatccagacagagatccaccatgtgcggacgctgaagatcatgctccgcgtttacgct
cgagagctgcgggaggccttacagctggacgaacgcaggctggactgtctgtttccccga
ctggacagcctgctggagctgcacaaccacttcctgtcccgtcttagagagcgccgtgta
gagtctctacagccaggcagcgaacgcaactacgccatcaataaactctcagatattctt
atatcccagttttcgggagagcttggagatcgcatgaaggaaagctatggggatttctgc
agtcgacacactgaagcggtcaaccactacaaagagcagctgcagagcaacaagaagttc
cagaacctgatgagaaaattaagtaatctgtcaatagtgcgacggttaggcgtcccagag
tgcatcttgttagtgacacagagaataaccaagtatcctgtgcttctggagcgcatcctg
cacaacactgaagctggaacagaagagcatgaaggattggcacaagctctgggtttaatc
aaagacgtcattgttcaggtggatgcacaggtcagtctctacgagaaggaagcgcggctc
agggaaatcgcctctaagatggagcccaaatcccttgggaaaattaaagacggacgcgtc
ttccgtaaggaggacctctctcagggccgccggaagctcttgtttgagggcacagtcaac
tggaaagctgcttctggtcgacttaaagatattctagctctgcttcttactgatgttctt
gttttgctgcaagagaaggaccagagatacgtgttctcaactgtggacaacaagccgtcg
gtcatttctttgcagaagttgattgtgcgtgaggtggcgcacgaagagcgggcaatgttc
ctcatctgcgcttcctcaaatgaacccgagatgtacgaaatccacaccgcctcaaaagaa
gaccgcaacacgtggatcacccatatccgtcaggcggtggagagctgtccgcatactgaa
gagagattgttcagtgaggaagaggaggccagagttgcccgcgtccgggagtaccaagag
cgtctggcgctgaaggatgctcagatcactcagagtctggcagagaagctgcagctgttt
gcggagctgtctgaatgtgtggccggtctggaggactcgggctcccgttctcgtctgctc
ctccgcggagacacgtctgacctccagcagggggagactctgctcaaagcagccatcact
gaagtggagaacctgcagaacctcctgacgtctcgagttcgaggaacatcggcacagact
gaaggaaaccagagtccgtccttgagcttgcttccacgccgagccgacacattcggcgga
tacgatagcaattctagtgcactgcctaagaacggcagcattaagaagaagggtcccgga
gcaggaggcaggacgagagacaggagtcaacgggccagttctgacccacagctcaaagag
gtgttcacctgtcaggaccacgatgagctggacgaggcttcctcacctgccagcaccaac
atgtggtcctcgtgtaaacttcctgaatcagagttgtatgagcgtgtgctgctgctttcc
cagagactctacagtttacaggccataatctcccagcaagacagccacattgagctccag
cgggcctcgatcctcacagctgagcgggagcgtcctggcagccgaacccgtggcaccgac
gtgctcctggaacaggaaaagcagcgcaacctggagaagcaccgcgaggagctggccaac
ttccagcggctgcagagccagcatcgacaggagcaggcgcgctgggagcgggaacgcgaa
aaacagcggcggctggcagaagcagaccagcagaggctgaaggagagagaggaggagtgc
agaaggctggagacacgtctggcagaggagagactggagctggagagacagagacagacc
taccagcaggacctggagaggctaagagagtccacacgtgccgtggagaaggagaaagag
cgtctggagcagcagaggaagctgaagaagcacaacactgtgcccaatactgcagcactg
tacacacaggagctcacacagctttccacttcctccagcttcaacggtgagtttctgctg
ggtggagcaggagagcagacgcaccctcagaagtctctcctgcgggccagcctctctgca
tcccccgcagactatccggaacgtcccgaagtccactcgcgcagagagagctcctgcaac
accctgcctgccaagaccgaggttcccatccatctcattagcaccaccaaccagctgcac
aagcagggcagcgtccagcagcagatccccaccaaactcgccgccctcagcaagggcaag
gagaagagtggaaaggggaagagttcccaccgtaccgacagtttggcgtctgtggacatg
aagcagatgctgcccatcaagctgtcagcaagggattcagacggaggtcacaaaacccgc
cgacccatcagccctcaccaacctcagcattcgcactcagattccctcagccctccagac
gcttattctgatgcccagtctagcctcgcgccagcccttcccaaaacccacaaccagacc
tcccagcaaaccctaccgtacactgttagcgatgaagccgctaaggaggacgttatcttt
ttctga
DBGET
integrated database retrieval system
