Danio rerio (zebrafish): 568984
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Entry
568984 CDS
T01004
Symbol
gabrr1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1 precursor
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04080
Neuroactive ligand-receptor interaction
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
568984 (gabrr1)
04082 Neuroactive ligand signaling
568984 (gabrr1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
568984 (gabrr1)
Ion channels [BR:
dre04040
]
Ligand-gated channels
GABA-A
568984 (gabrr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Sigma_reg_N
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
568984
NCBI-ProteinID:
NP_001020724
ZFIN:
ZDB-GENE-040724-212
Ensembl:
ENSDARG00000043902
UniProt:
Q5TZ16
LinkDB
All DBs
Position
20:complement(1175319..1195775)
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AA seq
466 aa
AA seq
DB search
MHADVCFLLCACFLCTGALQSCSKSRSKRETTRAERDLHKPGSTLLMRSPDVTKAPVTKS
EQLLKLDDHDFTMRPGFGGPAIPVGVDVQLESLDTISEVDMDFTMTLYLRHYWKDARLSF
PSNTNQSMTFDGRLVKKIWVPDIFFVHSKRSFIHDTTTENVMLRVHPDGKVLYSLRVTVT
SMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKRGNKSLQTDDKISLSQFLIQEFHT
TTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVP
LGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERK
ERSQNSRQLPCTCGMTHPGQMMMSSSYSEMDMMTTGNYGMSELSDTKQEQFLVHLVMDNE
QGAQRPAVTTSSTLNIDTHAIDKYSRVIFPGAYTLFNIIYWSIYSQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcggatgtctgctttctgctctgcgcgtgctttctctgcactggagctctgcag
tcctgtagcaagagcaggtccaagcgagaaacaaccagagcagagcgagacttgcataaa
cccggcagcactttactaatgcgaagtccagatgtgacgaaagctcccgtcaccaaatcc
gagcagctcctgaagctggacgatcacgacttcaccatgagaccaggctttggagggcct
gcgatacctgttggtgttgatgttcagctggagagtctggacaccatctctgaagttgat
atggacttcaccatgactctgtatctgagacactactggaaggacgcgcggctgtctttt
cccagcaacaccaaccagagcatgaccttcgatggccggctggtgaagaagatctgggtc
ccggacatatttttcgtccactccaagcgctccttcatccacgacaccaccacagagaac
gtcatgctgcgagtgcatcctgatgggaaggtgctctacagcttacgggtcacggttaca
tcgatgtgcaacatggacctcagtcactttcccctggacactcagacctgctcgctggag
atcgagagctacgcctatactgacgacgacctgatgttgtactggaagagagggaacaaa
tctctgcagacggacgacaagatctctctgtctcagttcctcatccaggagttccacacc
accacaaaactagccttctacagcagcacaggttggtacaaccgtctgtacatcaacttc
actctgcgccgccatattttcttcttcctgcttcagacgtattttcccgccactctgatg
gtcatgctgtcatgggtgtccttctggatcgaccggcgagctgttcctgccagagttcct
ctgggcatcacgacggtgctcaccatgtccaccatcatcaccggagtgaacgcctccatg
cccagagtctcctacatcaaagctgtggacatttacctgtgggtcagcttcgtctttgtc
ttcttatctgtcatcgagtacgccgcggtgaactacctgtccactctgcaggagcgcaaa
gagaggtcacaaaacagccggcagttgccgtgtacctgcggaatgacccatcccggtcag
atgatgatgagcagcagctacagtgagatggacatgatgaccacgggaaactacggcatg
tcggagctgagcgacaccaagcaggagcagttcctggttcatctggttatggataacgaa
cagggcgctcaaaggcccgccgtgaccaccagcagcacgttaaatatagacactcacgct
atagacaagtactcgcgggtcatcttccctggagcgtacacactcttcaacatcatatac
tggtccatctactcacagtga
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