Danio rerio (zebrafish): 569027
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Entry
569027 CDS
T01004
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
569027 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
569027 (smyd1b)
Enzymes [BR:
dre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
569027 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
569027 (smyd1b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
569027 (smyd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
MYND_ZMYND11_ZMYD8
TPR_12
Gln_amidase_like
RraB
Motif
Other DBs
NCBI-GeneID:
569027
NCBI-ProteinID:
NP_001034725
ZFIN:
ZDB-GENE-060522-1
Ensembl:
ENSDARG00000091253
UniProt:
Q2MJQ9
LinkDB
All DBs
Position
8:complement(1372836..1409148)
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AA seq
486 aa
AA seq
DB search
MEFVEVFDSPGKGRGLRATKEAWAGDVLFAEPPFASVVFDSQASSICHSCFRRQEKLQRC
GQCRFAQYCDKTCQRAGWEEHKLECAAIKTYGKPPSENVRLAARILWRMDKQGSVVSDNQ
LTTLEDLEDHICDISEDDLKDFKVDIHNFLDYWPRNSKPHTVDSVSHILGVINCNGFMVS
DQRGLQAVGVGLFPNLCLVNHDCWPNCTVILNNGNQSAIDTVFHSQKRIELRALGKISAG
EEVTVAYVDYLNVSADRQRLLKQQYFFDCTCKHCTEKIKDDLKMAGAEVDGVKVPEEQVK
EVTEFSRQKLEKMEKARIEANYNEVVKICRECVEKQENVLADTHIYYLRVCCTLSEVLSY
LQFFDEASEYARKMVDGYLKLYHPNNAQLGMATMRAGVTHWQAGFIEVAHGMICKAFAIL
MITHGPTHPITKDLEAMRMQTEMELRMFQQNEYVYHSMREAALKNQPMRMMAEPTNEGIK
NLFRRK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtggaagtttttgattctccagggaagggccgcgggctgagggccaccaaa
gaggcttgggctggagacgtgctgttcgctgagccacccttcgcttctgtggtgttcgac
agccaggcgtccagcatctgtcacagctgtttccggcgtcaggagaagctgcagcgctgc
ggacagtgcaggtttgcgcagtactgtgacaaaacatgtcagcgcgccggctgggaggaa
cacaagctggagtgtgctgccatcaagacctacggaaaaccgccgagtgaaaacgtccgt
ctggcggcccgtatcctgtggcgtatggataagcagggcagtgtggtgtccgacaatcag
ctgacgactctggaggatctggaggatcacatctgcgacatctcagaagacgacctgaag
gactttaaagtggacatccacaactttctggactactggccacgcaacagcaaaccgcac
acggtggacagcgtctcgcacatcctcggcgtgatcaactgtaacgggttcatggtgagc
gatcagcgcggcctgcaggcggtcggtgtggggttatttcccaatctgtgtttggtgaac
cacgactgctggcccaactgcactgtcatcctcaacaatggaaatcagtcggccatcgat
actgtgtttcactctcagaagaggattgagctgcgtgctctgggaaagatcagtgcgggt
gaagaagtgacggtggcgtatgtggattatctgaacgtgtctgcagaccgccagcgtttg
ctaaaacagcagtatttctttgactgcacatgcaaacactgcacagagaaaatcaaagat
gacctgaagatggccggagctgaggtggatggagtcaaggtgccggaagagcaggtgaag
gaggtcacagagttcagcagacagaagctggagaagatggagaaggccaggatagaggcc
aactataatgaagtggtgaagatctgccgtgagtgtgtggagaaacaggagaatgttctg
gccgacacacacatctattatctgcgtgtgtgttgtaccctcagtgaggtgctgtcctac
ctgcagttcttcgatgaggcgtccgaatatgcccgcaagatggtggacggatacctgaag
ctgtatcaccctaataacgctcagctggggatggccacgatgcgcgcgggcgtcacacac
tggcaggcaggcttcatcgaggtggcacatgggatgatctgcaaagccttcgccatcctg
atgatcacacacggacccacacaccccatcactaaagacctggaggccatgcgcatgcag
acggagatggagctgcgcatgttccagcagaacgaatacgtttatcactcgatgcgcgaa
gcggcgctcaaaaaccagccaatgaggatgatggcggagccaaccaatgagggcatcaag
aacctgttccgcaggaagtga
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