Desulforamulus reducens: Dred_1638
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Entry
Dred_1638 CDS
T00494
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
drm
Desulforamulus reducens
Pathway
drm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dred_1638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drm03400
]
Dred_1638
DNA repair and recombination proteins [BR:
drm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Dred_1638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABO50166
UniProt:
A4J513
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Position
1784241..1786589
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AA seq
782 aa
AA seq
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MERTIKRLEFDKVLERLASHAQSELGKQRVEELKPSTNMEDIKRWQAETSEGRELLRLDP
LAELAGWHDIRQALTRASRYAVLSAEELFAVGETLAASRQIKKFFSEKTDRYPLLSELAE
SLTNQAQLEKNILQAVLPGGEIADDASPELLQIRRGIQRSQNRIRERMENIIRSSDNQKY
LQDPIITIRNDRYVVPVKQEYRNQIPGIVHDQSASGATLFVEPMAVVEANNEVRQLVAAE
KQEIQRILGQLSQEVSGVHEDISIALETLGDLDFIMAKARYSLKLNAWSPKILAGPMIDI
KKGRHPLLPGDAVPATISLGKAFKTLVITGPNTGGKTVTLKTVGLFSLMTQAGLHIPAEA
GTEMGVFKQVFADIGDEQSIEQSLSTFSSHMTNLVRILDRAGEGSLVLMDELGAGTDPTE
GAALARAILEELHQRGACTLATTHYSELKNYAYATPGVENASVEFDVETLRPTYRLLIGR
PGRSNAFEISARLGLRREIIESARGFLTTEQVEVAELISRLEKTQQAAEKDRQEAALLRR
ESEQLKERYHALEQDLRAKKEAILVKAHEEASRMVRQARLEAEDTVKELRSRLAEESAKN
REQAIHHARNKLQQVTSKVAAKTPKRTADGEIPRQVKPGEEVFLPKYNQKAYVVGVSGNN
VQVQVGIMKMSVPMQELRTVKEVKVTSGQSKVGQVLMDKAQHIGTSLDLRGMTADEAMLE
IEKYLDDAFLAGLSSVTLVHGKGTGALRTSVQRELKNHPRVKTFRLGEAGEGGSGATVVT
LK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaacaatcaagcgtttagagtttgataaggtgttagaacgattggcaagccat
gcccaatcggagttgggcaaacaaagagttgaggaattaaagcccagcacaaatatggaa
gatattaagcgctggcaggcagaaaccagtgagggcagggaattactacggttagaccca
ttggcggagcttgccggctggcatgatattcggcaggcgttaactagggcttctcgctat
gctgtgctttctgccgaggaattatttgcagtgggcgaaaccctggcagcttcccggcaa
ataaaaaaatttttctctgagaaaacagaccgttatccactgctttcagagttggcggag
tccttaaccaatcaggcccaattggagaaaaatatcctgcaggcggttttgcctggagga
gaaattgcggatgatgcttcgccggaattattgcaaatccgtcgaggtattcagcgctcc
caaaacagaataagagaacgaatggaaaatatcattcgttccagtgataatcaaaaatat
ttacaggaccctattataaccatccgcaacgatcgctatgtggtgccagtaaaacaggaa
taccgcaatcaaattcctggtattgtccatgaccaatctgccagcggagccacgctgttt
gtggaacccatggcggtggtggaggccaacaacgaagttcgacaactggtggcagcagaa
aagcaggagattcaaagaattcttggccaactatcccaggaggtcagtggggtacacgag
gatatttccattgctctggagactctgggagatttggattttattatggccaaagctcgc
tacagccttaaattaaatgcctggagtccaaagatactggcagggccaatgatcgatata
aaaaagggacgtcacccgttattgcccggtgatgccgtaccggcaaccatatccctgggg
aaagcctttaaaacgttggttattaccggacccaatactggcggcaaaaccgttaccctg
aagacagttggtttgttttctctgatgacccaggctggcttacacattcctgcggaagcg
ggtactgaaatgggtgtgtttaaacaggtttttgccgatattggggatgaacaaagtatt
gaacagtcccttagtaccttttcttcccatatgacgaacctggttcgtattttggatagg
gccggggagggctccctggttttgatggatgaattgggagcgggcacagatcccacagag
ggtgcagccctggcccgggcaattttggaagaactccatcagcggggtgcctgtaccctg
gccaccacccactatagtgaattaaaaaactatgcctatgctacgcccggggtggagaat
gccagcgtagaatttgatgtagaaacactacgtcctacctatcgcctgctaattggtcga
cctggacgtagcaatgcctttgaaatttctgcccggttaggtttgcgtagggagattatt
gagagtgctcgagggtttctaaccaccgaacaggtagaggtggctgagttaatctcccgg
ttggaaaaaacccagcaagctgcggaaaaggaccggcaagaggccgcattattaaggcgg
gaaagtgagcaattaaaagaacggtatcatgccttagaacaggatctgagggctaagaaa
gaagccattctagttaaggcccatgaggaagccagtcgaatggttcgccaggctcggttg
gaggcagaggatactgtaaaagaattgaggtcccggttagcggaagaaagtgccaagaat
cgggagcaagcgatccatcatgcccgcaataagctgcagcaggttaccagcaaagtggcg
gctaaaactccgaagcgcacggcagatggggaaatacccaggcaagttaagccaggtgaa
gaagtctttctgcccaagtacaatcagaaggcctatgtggtgggtgtttccggtaataat
gtgcaggtacaggttggtatcatgaagatgtctgtaccaatgcaggagttgcgcactgta
aaagaagtcaaagtaacctctggtcaaagcaaggtgggccaggtgctaatggataaggcc
cagcatataggaaccagccttgacttgcggggcatgaccgcagatgaggctatgttggaa
attgaaaaatacctggatgatgccttcttagcaggactcagttctgttaccctggtacac
ggcaaaggaactggcgccctgcgaacttctgtgcaaagggaattaaaaaaccacccccgg
gtaaagactttccggttaggagaagccggtgagggaggatcaggagccacggtggttaca
ttaaagtaa
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