Desulforamulus reducens: Dred_2292
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Entry
Dred_2292 CDS
T00494
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
drm
Desulforamulus reducens
Pathway
drm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dred_2292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drm03019
]
Dred_2292
03009 Ribosome biogenesis [BR:
drm03009
]
Dred_2292
Messenger RNA biogenesis [BR:
drm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dred_2292
Ribosome biogenesis [BR:
drm03009
]
Prokaryotic type
rRNA helicases
Dred_2292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABO50802
UniProt:
A4J6U9
LinkDB
All DBs
Position
complement(2504876..2506324)
Genome browser
AA seq
482 aa
AA seq
DB search
MSSFYELGLSKSVSESIKLMGFEEATPIQEKAIPIALSGGDLIGQAHTGTGKTAAFGIPM
VERFSRQQDTIQGLIITPTRELAVQVAEEMNRIGQVKGIHTLPVYGGQDINRQIRALKKK
PHIIVGTPGRLMDHMKRKTIRLNELTMVVLDEADEMLNMGFIEDIEEILQQVPEERQTLL
FSATISKPIQELARRFLKNPEFIAIKAKEVTVPSIDQSYVEVQEKQKFEVLSTFLDIQSP
DLAIVFGRTKRRVDELYEALSKRGYSAEGIHGDLTQSKRESVLRQFKEGIIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGEAITFVTPREMNHLRLIERITK
HKISRRPIPTIKEVIEGQQRLAVEKLLKVVEEGGFEHYRRLAEDLLIEQDAATLVAAALR
MITKEPDRTPVQLTEERPLRSKKAESFQPRMRKPYKDNRGKIEGKKRGEFKGHRRGKKRP
SI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttttatgagcttggtcttagtaagtctgtgagcgaatcaataaagctcatg
ggctttgaagaagctacgccaattcaagaaaaagctattcccattgctttgtctggggga
gacttaatcggacaggcccacacaggaacaggaaagactgctgcctttggaatacctatg
gtagaaagattttcacggcaacaagatacaatccagggactcattataacaccaactcgg
gaactggccgttcaggtggcagaggaaatgaacaggattgggcaagttaaaggaatccat
accctgcctgtttacggcggacaagacattaatcgtcaaattagagccctaaagaaaaaa
ccccacatcatagtcggtactccgggaaggctaatggaccatatgaaaagaaaaaccatt
cgtctaaatgagcttaccatggtggttttagatgaagctgatgagatgctcaatatggga
tttattgaagatattgaggagatattacaacaggttcctgaggaacgtcagaccctactt
ttctctgctacaatatcaaaacccattcaagaattagcccgacgattcctaaaaaacccc
gagtttattgctattaaggccaaagaagttactgtacccagtattgatcaaagttacgta
gaggtacaggaaaagcaaaaatttgaagttctctctacatttttggatattcaatctccg
gatctggccattgtttttggacggaccaaacggagggttgatgaactttacgaggcctta
agcaagcggggctattctgctgaaggtattcacggtgatcttacccagtccaagcgagaa
agtgttttgcgtcagtttaaggagggtataattgaggttttggtggcaacggatgtagca
gccagggggttagatatcagtggtgtaacccatgtgtataactttgatatcccccaggac
ccggaaagctatgtccaccgcataggtcgtaccggccgagccggcaaaaaaggtgaagcc
ataacctttgttacccccagagaaatgaatcatctaaggcttatcgaaagaataaccaaa
cacaagatcagtcgtcgacccatacccaccatcaaagaagtcatagaagggcaacaacga
ctggctgtggaaaaattattaaaagttgtggaagagggtggcttcgaacattatcgtaga
ctggcagaggatttattaattgaacaggatgctgcgacccttgtggcggcggccctgagg
atgataaccaaggaaccggatcgaacacctgttcaattaacagaagaaagaccccttcgt
tcaaagaaggcagagtcctttcagccccggatgaggaaaccgtacaaggataaccgtggt
aaaatagagggaaaaaaaagaggggagtttaagggtcatcggcgcggtaagaaaagacct
tctatatag
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