Drosophila sechellia: 6607153
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Entry
6607153 CDS
T01064
Name
(RefSeq) maternal protein pumilio isoform X1
KO
K17943
pumilio RNA-binding family
Organism
dse
Drosophila sechellia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
6607153
NCBI-ProteinID:
XP_032576352
LinkDB
All DBs
Position
3R:19193891..19360526
Genome browser
AA seq
1539 aa
AA seq
DB search
MKFLGGNDDRNGRGGVGVGTDAIVGSRGGVSQDAADAAGAAAAAAVGYVFQQRPSPGGVG
VGVGGVGGGVPGVGAVGSTLHEAAAAEYAAHFAQKQQQTRWACGDDGHGIDNPDKWKYNP
PMNPANAAPGGPPGNGTNGGPGAIGTIGMGSGLGSMGGGGGGGGAGGGAGGGNNGGSGTN
GGLHHQSMAAAAANMAAMQQAAAVAKHNHMMSQAAAAVAAQQQQHQHPHQQHPQQQQQQA
QNQGHPHHLMGGGNGLGNGNGLGIQHPGQQQQQQQQQQQQHPGQYNSNLLNHAAALGHMS
SYAQSGGSMYDHHGGAMHPGMNGGMPKQQPLGPPGAGGPQDYVYMGGQTTVPMGAAMMPP
QNQYMNSSAVAAANRNAAITTSTAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVW
KDHTWSTQSENILVPPPSRAYAHGGASDTSNSGNAGILSPRDSTCAKVVEYVFSGSPTNK
DSSLSGLEPHLRNLKFDDNDKSRDDKEKANSPFDTNGLKKDDQVTNANGVVNGIDDDKGF
NRTPGSRQPSPAEESQPRPPNLLFPPLPFNHMLMDHGQGMGGGLGGVVGSGNGVGGGSGG
GGAGGAYAAHQQMAAQMSQLQPPMMNGVGGGMPMAAQSPMLNHQAAGPNHMESPGNLLQQ
QNFDVQQLFRSQNPGLAAVATNAAAAAAAAAAATSAASAAAAVGAPPVPNGSLQQSQQQQ
QQQQQQQQQQQQMHMAAASQQFLAAQQQAQNAAYAAQQATPYVINPGQEAAPYMGMIAAA
QMPYYGVAPWGMYPGNLIPQQGTQPRRPLTPSQQGAENQSYQVIPAFLDHTGSLLMGGPR
TGTPMRLVSPAPVLVPPGATRAGPPPPQGPQLYQPQPQTAQQNLYSQQNGSSVGGLALNT
SSLTGRRDSFDRSTSAFSPSTMDYTSSGVAAAANAVNNTVAQAAAAAAAAAAARGKWPGA
MSGAASGAYGALGAGNASASPLGAPNTPPPSAQSCLLGSRAPGAESRQRQQQQQQLAAVG
LPATAAAAQAAVAAAANNMFGSNSSIFSNPLAIPGTAAVAAAAAAAAAANSRQVAATAAA
AAAVAAAAGGVGGPQPGRSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLE
RATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQ
MYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIN
AFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLE
HGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHV
MMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMKITNP
ITVGTGTGGVPASSSAAAVSSGVTSASVTACTSGSSTTTTSTTNSLASPTICSVQENGSA
MIVEPSSPDASESSSSVVSGAVNSGLGPIGPPTNGNVVL
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttgggtggtaacgatgatcgcaatggccgcggaggcgtcggcgttggcacg
gatgccattgtaggatctcgcggtggcgtctcgcaggatgccgccgatgcagctggtgcc
gccgcagccgccgccgtcggctatgtcttccagcagcgtccatcgcctggtggcgttggc
gtcggcgtgggcggagtgggtggcggtgtgccaggggtcggagccgtaggctcgaccttg
cacgaggccgccgccgccgagtacgccgcccactttgcccagaagcaacagcagacacga
tgggcgtgcggcgacgacggccatgggatcgataacccggacaaatggaagtacaatccg
ccgatgaatccggccaacgcagctcctggcggtccaccgggaaatggcaccaatggtggg
cccggcgccattggaaccattggcatgggcagcggattgggcagcatgggaggtggtggt
ggcggcggcggagctggcggcggagctggcggcggaaataatggcggctctggcacgaat
ggtggtctgcatcatcaatcgatggccgctgcagctgcgaatatggccgccatgcaacag
gcggcggcggtggcaaagcacaatcacatgatgtcacaggcagcagccgccgttgcagcc
cagcagcagcaacatcagcatccacaccaacagcatccccagcagcagcagcagcaggcg
cagaaccaggggcatccacatcacctcatgggcggtggcaatggactgggcaacggcaac
ggattgggcatacaacatcccggccagcagcagcagcagcagcaacaacagcagcagcaa
catcccggccagtacaactcgaatctgctcaaccatgcggctgccttgggtcacatgtca
tcttatgcccaatcgggtggcagcatgtacgaccatcatggtggagccatgcacccggga
atgaacggcggcatgcccaagcaacagccattgggtccacccggagccggaggaccccag
gactatgtctacatgggtggccagaccactgtgcccatgggagccgcaatgatgccgcca
cagaatcaatatatgaacagctctgctgttgcagctgccaatcggaatgcagcgattacc
acatccactgccaagaaattgtgggagaaatccgatggcaagggcgtgtcctcgagcact
cccggtggaccgttgcatccgctgcagatcccaggcatcggggatccctcctccgtgtgg
aaggatcacacctggtccacacagagcgagaatatcctggtgccgcccccctcgcgagcc
tacgcccatggaggcgcctccgatacttcaaacagcggcaatgcgggcatactgagtccc
cgcgattcgacttgcgccaaagtggttgaatatgtttttagtggctcgcccaccaacaag
gatagctcgctttccggattggagccgcatttgcggaatctaaagtttgacgacaacgat
aagtcacgcgacgataaggaaaaggcaaactctccgtttgacacaaacggtttgaagaag
gacgatcaggtcacaaacgcaaatggtgttgtcaacggcattgacgatgacaagggcttc
aatcgcactcccggttcacgtcaaccatcacctgcagaggagtcccagccacgtccccca
aatctactctttcccccactgccttttaatcacatgctcatggatcatggccaaggcatg
ggcggcggtttgggcggagttgtcggatctggcaacggggttggaggcggcagcggcgga
ggcggggcaggcggcgcttatgcggcccaccagcagatggccgcccagatgagtcaattg
caaccgccgatgatgaacggcgttggcggcggaatgccaatggcagcacagtcacccatg
ttgaatcaccaggcagctggacccaatcatatggaatctcccggaaatctcttgcagcag
caaaattttgatgttcagcaactgtttcgctcgcagaatccgggccttgcagcagttgcc
acaaatgcagcggccgcagcagcagccgcagcagctgccacatcggcagcgagtgctgcg
gcagcggtgggcgcaccccccgttcccaacggatcgctgcagcagtcgcagcagcaacag
cagcagcagcagcaacagcagcagcagcagcaacagatgcacatggcggccgcgtcgcaa
caatttttggccgcccagcagcaggcgcaaaatgcggcctatgccgcccaacaggccacg
ccctacgtcatcaatccgggccaggaggctgccccgtatatgggcatgattgccgccgcc
cagatgccgtactatggcgtagcgccatggggcatgtatccgggcaatctgattccgcaa
cagggaacgcagccgcgccgccccctcaccccctcgcagcagggtgccgagaatcagtcg
tatcaggtcatcccggcattcctcgatcacacgggctccttgctgatgggaggaccccgc
accgggacgccgatgcgtctggttagccccgcccccgttctggtgcccccgggcgccacc
cgtgccggccctccgcccccgcagggcccacagctgtatcagccgcagccgcagacggcc
caacagaatctctactcgcagcagaatggatccagtgtcggaggcctcgccttgaacacg
agctcgttgacgggtcgccgcgactccttcgaccgcagcacctccgccttcagtccctcg
accatggactacaccagcagcggtgtggcagcggccgccaatgcggtgaacaacacagtg
gcccaggcagcagcagctgccgcagcagccgccgcagcgcgtggcaagtggccgggagcg
atgtcgggagcggccagtggagcctacggagccctgggagcgggcaatgcctcggccagt
ccgctgggtgcaccaaacacaccgccgccatcggcgcaatcctgtctcctgggcagtcgt
gcacctggagccgagtcccgccagcggcagcagcagcaacagcagctggccgccgttggt
ctgccggcgactgcagcagctgcccaggcagcggtggcagcggctgccaacaatatgttc
ggatccaacagctcgatcttctcgaatcccctggccattccgggtacggcagctgtggca
gctgcggcggcagcagcagcggccgccaactctcgtcaggtggctgccacggcagcggca
gcagcggcggtggcagcagccgccggcggagtgggaggtccacagccaggaagatctcgc
cttctcgaggatttccgcaaccagcggtatccaaatcttcagctacgcgatctcgctaac
cacattgtggagttctcacaggatcagcacggctcgcggtttatacaacagaagttggag
cgggccaccgctgccgagaagcaaatggtgttcagcgagatcctagcagcagcctatagc
ctgatgaccgatgtctttggcaactatgtcatccagaagttctttgagttcggcactccc
gagcagaagaacacgctgggcatgcaggtcaagggtcatgtgctgcagctggcgctgcaa
atgtatggctgccgagtgattcagaaggctctggagagcatctcgccggagcagcagcaa
gaaatcgtgcacgaactggacggacatgtgctgaagtgcgtcaaggatcagaatggcaat
catgtggtgcagaagtgcattgagtgcgtggaccccgtggcgctgcagttcatcatcaat
gcgttcaagggtcaggtttactcgctgagcactcatccgtatggatgccgggtgatccag
aggatcctcgagcattgcactgccgaacagaccacgcccattttggacgaactgcacgag
cacaccgaacagttgattcaggaccaatatggcaactatgtaattcagcatgtgcttgaa
cacggcaagcaggaggataagtcgattcttatcaacagcgtgcgcggcaaagttctggtg
ctatcacagcataagttcgcctcaaacgttgtggagaaatgcgttacccatgcaactcgc
ggagaacgcactggtctcatagacgaggtctgcactttcaacgacaacgcgttgcacgtg
atgatgaaggatcagtatgccaactatgtggtccaaaaaatgatcgatgtatcagagccg
acgcagctcaagaagctgatgaccaagatccggccccacatggccgccttgcgcaagtac
acctacggcaagcacatcaatgccaagttggagaagtactacatgaagataaccaatccc
ataacggtgggcacaggaactggaggagtgccggcctcctcgtcggcggcggcagtcagc
agtggtgtcacctcggcatcggtaaccgcctgcaccagtggcagcagcaccaccacgacc
agcactaccaacagcctggcctcacccaccatttgctcggtgcaggagaacggcagcgcc
atgattgtggagccctcctccccggacgcctccgagtcctcgtcctcggtggtgtcaggc
gctgtcaacagcggattgggtcccattggacccccgaccaacggcaacgttgtgctgtaa
DBGET
integrated database retrieval system
