Drosophila sechellia: 6608295
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Entry
6608295 CDS
T01064
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
dse
Drosophila sechellia
Pathway
dse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6608295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6608295
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
6608295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_8
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_11
TPR_9
TPR_19
TPR_17
ARM_TT21_C
HisK-N-like
ANAPC3
Motif
Other DBs
NCBI-GeneID:
6608295
NCBI-ProteinID:
XP_002033032
UniProt:
B4HSL8
LinkDB
All DBs
Position
2R:5345316..5350081
Genome browser
AA seq
1233 aa
AA seq
DB search
MSAVKESKALIKDIRETIKLGKHAEAIPKCQRLLKSEPENAMGYLLLGAAYQNIDKVEAA
KNLRQCIKCTEGPAPAALLGLANCAPSNELPEIYDQLADLQPEQSFHYWEKLFNLASDSM
VAPLCFTVLKKRVQDTQNGNFTKIQEYLGRIWVSNDFEIAPEDTQLYKTTMEALLQTSEP
SARSVVYKRYLKWLYKKQDYKSCVRHACNMIESHPKDVYGFEWICKTYCEHHEQSEIDLW
QQELRHPVPVYAGQLLELNPNSNLALLVKALDLFAEGQLVASRQLALQAQKSQPAYKVTL
ELLARIHMELGAYKLALQLWQEIGQENDAFALCLSHEKCVSKLREAVTILQTLENSEGNI
KSLARCYFKLGELHLLKDLPLDDLTKAEFLLSPSEALQEIAACETFEAYLLCGKLHMALK
NYSDALNNVLKATRLRPHFAECFDYLGRLYPLATGDISRARKCYEKCISLNPLAEEAVDA
LSFIYQELGEEELNEALLLNTLSHLDSNESIRLQYKLGLHFLHVKKWDNAIQCFRIAIKN
DSRCISYWESLGDAYAGRGSYNSAIRVFQKILELSPENNYALLQIASVKTTIRMYTESIE
DYDTLLKRNPSYLPGLRGAAEAHIGIANSLKSQNLYGRCKEHFQLALEHLQIAFLQREAQ
GMVWLWRLSANIFVQTAQLPHSLANLDVAGNLAKREEAIAYLSRKDLLQLAQRFYLCALK
LKQNTYLWYELSLASYYSAILIPEDAKAHLETATKACKMAIKEHSNRWQNWNLLGVINMH
SENENLPLAQHCFIQAVVLEKKCYIAWTNLGVLYIKLNEVRLANEAFTRAQQSSPVYANA
WIGQAMVAESIGDREEAFDLFRHCQQFDYHPEAALGFAHWVCEMLSTPGSGDKPRIKHAI
EHMYADVHALDAINWYVQNEETEATTASLSFQGFLYARKKLYRQAIEAFTRACKLCEPGA
DRDKLYTNLGYLYLKIDQPEQAAHALNTVAHATFKPIIGLAQAYYRAGQLQESYSIYNSV
LANVVDHGDDKAATILVAMASMIYDFQGEADTKTLLYQCVLLKEVPIQALYSALALGILH
RDNALIHTILAELNEYAFKKEYCADVSYLTAHYILINEGARRALCYLQTRIRMFPHSRNL
RSVVLKFLLDYFSDDQAYRLATSNMGRITLTLGHTKQQNSILASEEALTTIYASQAVSPV
NKTCAMKFLQRAILLSPTDQRARQLLSAIIANS
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgtaaaagagtcaaaggccttgatcaaggatatccgggagaccataaagctg
ggcaagcatgcggaagccatacccaagtgccaacgcctgcttaaatcggagcccgaaaat
gctatgggatacttgttgctcggggcagcctaccagaatatcgacaaggtggaggcggcc
aagaacctgaggcagtgcatcaagtgcacggagggtccggcccctgccgcgctcctcgga
ctcgccaactgcgcgcccagcaacgaactgcccgaaatctatgatcagttggctgacctg
caaccagaacaatcctttcactattgggaaaagcttttcaacttggccagtgactcaatg
gtggctcctttgtgcttcacagtactaaaaaagagagtgcaggacacacagaatggaaat
ttcactaaaattcaagagtatctgggacgcatttgggtctcaaacgactttgaaattgca
cccgaagatactcagctttacaaaacgactatggaagctctgctgcagacctctgaaccc
agtgcaaggagtgtggtttacaagcgatacctgaagtggctttacaagaagcaggattat
aagtcatgcgtgcggcacgcctgcaacatgatcgagtcgcatcccaaagatgtctatggc
ttcgagtggatatgcaagacctactgcgaacaccacgagcaatccgaaatagatctttgg
caacaggaactgaggcatcccgttccggtgtacgctgggcagcttctggagcttaatcct
aactctaaccttgctttgttggttaaagccctggatcttttcgctgaggggcagctcgtc
gcatccaggcaattggcattgcaggcgcagaaaagtcaacctgcgtacaaagtaacgctg
gaattgctggctcgtatccacatggagctgggcgcatacaagttggcgcttcagctgtgg
caggagattggtcaggaaaacgacgcttttgctctgtgtttatcgcacgaaaagtgcgtt
tcgaaactaagagaagctgtcacgattttacaaacgcttgaaaactccgagggaaatatt
aagtctttggctcgctgctacttcaagctgggggaactgcacttgctgaaagatttgccc
ttggatgatctgaccaaagctgaatttcttttatctccatctgaagctcttcaagaaatt
gctgcctgtgagacgtttgaggcatacctactttgtggcaagctgcatatggcgctgaaa
aactattcagacgccctaaataatgtgctaaaggccactcgattgcgtccgcactttgcc
gagtgcttcgactatctgggcaggctgtacccgctggccactggggacatctcgcgagcc
cgcaagtgctacgagaagtgcataagcctcaatccccttgctgaggaagctgtggatgcc
ttgagttttatctaccaggaactgggcgaggaggaactgaacgaggccctgctgctgaac
acattgagccatttggatagcaatgaatcaattcgattgcagtacaagctgggtctgcat
ttcttgcatgtgaagaagtgggacaatgcaatacaatgctttcgcattgccattaagaat
gactcccgctgcattagctactgggagtcattgggtgatgcttatgcgggacgcggctcg
tacaactcggctattcgagtctttcaaaagatccttgaactatccccggagaataattat
gccctgcttcagatagcctcagtcaaaacgacaatacgcatgtacacggaatctatcgaa
gattacgatacgctgctaaaacggaatcctagttacctgcccggacttcggggtgctgct
gaggcgcatattggcattgcgaatagtttgaaaagccagaacttgtacggaagatgcaaa
gagcatttccaattggctctggaacaccttcaaatcgccttcctccagcgtgaagctcaa
ggcatggtttggctatggcgcctctcggccaacattttcgttcagacagcccagttgccg
cactcgttggccaacttggatgtggctggaaacctagccaagcgcgaagaagccattgcg
tatctgtcacgcaaggatcttctacaactagctcagcgcttctacttgtgtgccctaaaa
ctgaaacagaatacctacctgtggtacgagctgtcgttggccagctactacagtgccatt
ctcattcccgaggatgcaaaagcccacttagagacggcgactaaggcgtgcaaaatggcc
attaaggagcatagcaatcgatggcaaaattggaatcttctcggagtgatcaatatgcac
tccgaaaacgagaatctgccattggcacagcactgttttattcaggctgtagtgctggaa
aagaagtgctacatagcgtggaccaatcttggagttctctatattaaactgaatgaagtc
cgattggccaacgaggcctttacgagagcccagcaatcaagtcccgtgtacgccaacgct
tggattggtcaagcaatggtggcggagtccattggcgatcgcgaggaagcctttgatctg
tttcgacattgccagcagttcgattaccatccggaggcggcgcttggatttgcgcactgg
gtgtgcgaaatgctgtcgactcctggatctggcgacaagccgcgcattaagcatgccatc
gaacacatgtacgctgatgtgcatgcgctggatgccatcaattggtatgtgcaaaacgag
gagacggaagcgactacagcatcgctgtcgttccagggattcctctacgcccggaaaaaa
ctgtatcggcaagcaatcgaagccttcactcgggcgtgtaagttgtgcgaacctggagcg
gatcgtgacaagctgtacacgaatcttggatacctgtacttgaaaatagaccagccagag
caggcggcacacgccctaaacacggttgcacatgccacatttaagccgatcataggcctg
gcccaggcatattatcgagccggtcagctgcaggaatcctactccatttacaactccgtt
ctcgccaacgtggttgaccatggcgatgacaaagcagctaccatcctagtggctatggcc
tctatgatttacgactttcagggcgaagcggacaccaaaaccctactctatcagtgtgtc
ttgttgaaggaggtccccattcaggcgttgtactcagcccttgccctaggcatacttcat
agggataatgcgttgatccacacgatactggcggagttgaatgagtacgcctttaagaag
gagtattgtgctgacgtatcctatttaacggctcactacatcctgataaatgagggtgcc
cgaagagcgttgtgctatctacagactcgcatacgaatgtttccccattcccgaaatctg
cgaagtgtcgtgctaaagtttcttcttgattatttctctgatgaccaagcctaccgactg
gccacttcaaatatgggtcgaataactcttactctgggacacactaagcaacaaaatagc
atcttggccagcgaagaggcactgaccactatatatgccagtcaggcagttagtccagta
aacaagacctgtgctatgaagttcttgcaacgcgctatactgctaagcccaactgaccag
agagccagacaattactttccgccattattgcaaattcatga
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