Drosophila sechellia: 6617946
Help
Entry
6617946 CDS
T01064
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dse04040
]
6617946
Ion channels [BR:
dse04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
6617946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
6617946
NCBI-ProteinID:
XP_032580456
LinkDB
All DBs
Position
X:complement(16552803..16616379)
Genome browser
AA seq
2144 aa
AA seq
DB search
MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQK
EIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSK
GKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVES
TEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALR
TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQK
CIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISGAGQCDDDYVCLQGF
GPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYL
VNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANAQAQAAADAAA
AEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPAP
TTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTY
QDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGG
MAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDTNHKLDHRDYEIGLECTDEAGKIK
HHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTF
KDKALEVILKGIDVFCVWDCCWVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHH
DMNKEMERVLKSGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLE
GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQ
LFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFF
LATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIAD
CFKLIRNKLTNQISDQPSGERTNQISWIWSEEHGDNELELGHDEILADGLIKKGIKEQTQ
LEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDD
TASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGD
IIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFET
AVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTN
AWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQ
AIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTW
VNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFII
FGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPR
WRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSE
CLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVL
RLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNF
KTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLV
ISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEF
LDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGE
IAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARGEGGGSFEPDTDHGDGGDPDA
GDPAPDEPTDGDAPAGGDGSVNGTAEGAADADESNVNSPGEDAAAAAAAAAAAAGTTTAG
SPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagattccgactcgatatctgaggaagaacgcagtttgttccgtccctttacc
cgcgaatcattggtgcaaatcgaacaacgcattgccgctgaacatgaaaagcagaaggag
ctggaaagaaagagagccgagggagaggtgccgcaatatggtcgcaagaaaaaacaaaaa
gaaatccgatatgatgacgaggacgaggatgaaggtccacaaccggatcctacacttgaa
cagggtgtgccaatacctgttcgattgcagggcagcttcccgccggaattggcctccact
cctctcgaggatatcgatccctactacagcaatgtactgacattcgtagttgtaagcaaa
ggaaaagatatttttcgcttttctgcatcaaaagcaatgtggatgctcgatccattcaat
ccgatacgtcgtgtggccatttacattctagtgcatccattattttccctattcatcatc
accacaattctcgtcaactgcatcctgatgataatgccgacaacgcccacggttgagtcc
actgaggtgatattcaccggaatctacacatttgaatcagctgttaaagtgatggcacga
ggtttcattttatgcccgtttacgtatcttagagatgcatggaattggctggacttcgta
gtaatagctttagcttatgtgaccatgggtatagatttaggtaatctagcagccctgcga
acgtttagggtgctgcgagcgcttaaaaccgtagccattgtgccaggcttgaagaccatc
gtcggcgccgtcatcgaatcggtgaagaatctgcgcgatgtgataatcctgaccatgttc
tccctgtcggtgttcgcgttgatgggcctacagatctacatgggcgtgctcacgcagaag
tgcatcaagaagttcccgctggacggctcctggggcaatctgaccgacgagaactgggac
tatcacaatcgcaatagctccaattggtactccgaggacgagggcatctcatttccgttg
tgcggcaatatatccggtgcggggcaatgcgacgacgactacgtgtgcctgcaggggttt
ggtccgaatccgaattacggctacaccagcttcgattcgttcggatgggctttcctgtcc
gccttccggctgatgacacaggacttctgggaggacctgtaccagctggtgttgcgcgcc
gccggaccatggcacatgctgttctttatagtcatcatcttcctaggttcattctatctt
gtgaatttgattttggccattgttgccatgtcgtatgacgaattgcaaaagaaggccgaa
gaagaagaggctgccgaagaggaggcgatacgtgaagcggaagaagctgccgccgccaaa
gcggccaagctggaggagcgggccaatgcgcaggctcaggcagcagcggatgcggctgcc
gccgaagaggctgcactgcatccggaaatggccaagagtccgacgtattcttgcatcagc
tatgagctatttgttggcggcgagaagggcaacgatgacaacaacaaagagaagatgtcc
attcggagcgtcgaggtggagtcggagtcggtgagcgttatacaaagacaaccagcacct
accacagcacaccaagctaccaaagttcgtaaagtgagcacgacatccttatccttacct
ggttcaccgtttaacatacgcaggggatcacgtagttctcacaagtacacgatacggaac
ggacgtggccgctttggtatacccggtagcgatcgtaaaccattggtattgtcaacatat
caggatgcccagcagcacttgccctatgccgacgactcgaatgccgtcaccccgatgtcc
gaagagaatggggccatcatagtgcccgtgtactatggcaatctaggttctcggcactca
tcgtatacctcgcatcagtcccgaatatcgtatacctcacatggcgatctactcggcggc
atggccgtcatgggcgtcagcacaatgaccaaggagagcaaattacgcaaccgcaacaca
cgcaatcaatcagtgggcgccaccaatggcggcaccacctgtctggacaccaatcacaag
ctcgatcatcgcgactacgaaattggcctggagtgcacggacgaagctggcaagattaaa
catcatgacaatccttttatcgagcccgtccagacacaaacggtggttgacatgaaagat
gtgatggtcctgaatgatatcatcgaacaggccgctggtcggcacagtcgggcaagcgat
cgcggtgtctccgtttactatttcccaacagaggacgatgacgaggatgggccgacgttc
aaagacaaggcactcgaagtgatcctcaaaggcatcgatgtgttttgtgtgtgggactgt
tgctgggtttggttgaaatttcaggagtgggtatcgctcatcgtcttcgatcccttcgtc
gagctcttcatcacgctgtgcattgtggtcaacacgatgttcatggcgatggatcaccac
gatatgaacaaggagatggagcgcgtgctcaagagtggcaactatttcttcacggccacc
tttgccatcgaggccaccatgaagctgatggccatgagccccaagtactatttccaggag
ggctggaacatcttcgacttcatcatcgtggccctatcgctgctggaactcggactggag
ggtgtccagggtctgtccgtcttgcgttcctttcgattgctgcgtgtatttaaactggcc
aagtcttggccaacacttaatttactcatttcgattatgggacgtaccatgggcgctttg
ggtaatctgacatttgtactttgcattatcatcttcatctttgcggtgatgggaatgcaa
ctgttcggaaagaattatcatgatcacaaggaccgctttccggatggcgatctgccgcgc
tggaacttcaccgactttatgcacagtttcatgatcgtgttccgggtgctatgcggagaa
tggatcgagtccatgtgggactgcatgtacgtgggcgacgtctcgtgcattcccttcttc
ttggccaccgttgtcatcggcaatcttgtggtacttaaccttttcttagccttgcttttg
tccaattttggctcatctagcttatcagcgccgactgccgataacgatacgaataaaata
gccgaggccttcaatcgaattggccgatttaaaagttgggttaagcgtaatattgctgat
tgtttcaagttaatacgtaacaaattgacaaatcaaataagtgatcaaccatcaggtgag
aggaccaaccagatcagttggatttggagcgaagagcatggtgacaacgaactggagctg
ggccacgacgagatcctcgccgacggcctcatcaaaaaggggatcaaggagcagacgcaa
ctggaggtggccatcggggatggcatggagttcacgatacacggcgacatgaagaacaac
aagccgaagaaatccaaatatctaaataacgcaacgatgattggcaactcaattaaccac
caagacaatagactggaacacgagctaaaccatagaggtttgtccttacaggacgacgac
actgccagcattaactcatatggtagccataagaatcgaccattcaaggacgagagccac
aagggcagcgccgagacgatggagggcgaggagaagcgcgacgccagcaaggaggattta
ggtctcgacgaggaactggacgaggagggcgaatgcgaggagggcccgctcgacggtgat
atcattattcatgcacacgacgaggatatactcgatgaatatccagctgattgctgcccc
gattcgtactataagaaatttccgatcttagccggtgacgatgactcgccgttctggcaa
ggatggggcaatttacgactgaaaacttttcaattaattgaaaataaatattttgaaaca
gctgttatcactatgattttaatgagtagcttagctttggcattagaagatgtacatctg
ccacaaagacccatactgcaggatattttatactatatggacagaatatttacggttata
ttcttcttggaaatgttaatcaagtggttggcgctcggcttcaaagtgtacttcaccaac
gcgtggtgttggctggatttcgtgattgtcatggtatcgcttatcaacttcgttgcttca
cttgttggagctggtggtattcaagccttcaagactatgcgaacgttaagagcactgaga
ccactacgtgccatgtcccgtatgcagggcatgagggtcgtcgttaatgcgctggtacaa
gctataccgtccatcttcaatgtgctattggtgtgtctaatattttggctaatttttgcc
ataatgggtgtacagctttttgctggaaaatattttaagtgcgaggacatgaatggcacg
aagctcagccacgagatcataccaaatcgcaatgcctgcgagagcgagaactacacgtgg
gtgaattcagcaatgaatttcgatcatgtaggtaacgcgtatctgtgccttttccaagtg
gccaccttcaaaggctggatacaaatcatgaacgatgctatcgattcacgagaggtggac
aagcaaccaattcgtgaaacgaacatctacatgtatttatatttcgtattcttcatcata
tttggatcatttttcacactcaatctgttcattggtgttatcattgataattttaatgag
caaaagaaaaaagcaggtggatcattagaaatgttcatgacagaagatcagaaaaagtac
tataatgctatgaaaaagatgggctctaaaaaaccattaaaagccattccaagaccaagg
tggcgaccacaagcaatagtctttgaaatagtaaccgataagaaattcgatataatcatt
atgttattcattggtctgaacatgttcaccatgaccctcgatcgttacgatgcgtcggac
acgtataacgcggtcctagactatctcaatgcgatattcgtagttattttcagttccgaa
tgtctattaaaaatattcgctttacgatatcactattttattgagccatggaatttattt
gatgtagtagttgtcattttatccatcttaggtctcgtacttagcgatattatcgagaag
tacttcgtgtcgccgaccctgctccgagtggtgcgtgtggcgaaagtgggccgtgtcctt
cgactggtcaagggagccaagggcattcggacactgctcttcgcgttggccatgtcgctg
ccggccctgttcaacatctgcctgctgctgttcctggtcatgttcatcttcgccatcttc
ggcatgtcgttcttcatgcacgtgaaggagaagagcggcatcaacgacgtctacaacttc
aagacctttggccagagcatgatcctgctctttcagatgtcgacgtcagccggttgggat
ggtgtactggacgccattatcaatgaggaagcatgcgatccacccgacaacgacaaaggc
tatccgggcaattgtggttcagcgaccgttggaataacgtttctcctctcatacctagtt
ataagctttttgatagttattaatatgtacattgctgtcattctcgagaactatagtcag
gccaccgaggacgtgcaagagggtctaaccgacgacgactacgacatgtactatgagatc
tggcagcaattcgatccggagggcacccagtacatacgctatgatcagctgtccgaattc
ctggacgtactggagcccccgctgcagatccacaaaccgaacaagtacaagatcatatcg
atggacatacccatctgtcgcggtgacctcatgtactgcgtcgacatcctcgacgccctt
acgaaagacttctttgcgcggaagggcaatccgatagaggagacgggtgagatcggtgag
atagcggcccgcccggatacggagggctacgagcccgtctcatcaacgctgtggcgtcag
cgtgaggagtactgcgcccggctaatccagcacgcctggcgaaagcacaaggcgcgcggc
gagggaggtgggtccttcgagccggatacggatcatggcgatggcggtgatccggatgcc
ggggacccggcgcccgatgaaccaacggacggcgatgcgcccgctggtggtgatggtagt
gttaacggtactgcagaaggagctgccgatgccgacgagagtaatgtaaatagtccgggt
gaggatgcagcggcagcagcagcagcagcagcggcggcggcgggcacgacgacggcggga
agtcccggagcgggtagcgccgggcgacagaccgccgttctcgtggagagcgacgggttc
gtgacgaagaacggccacaaggtggtcatccactcgcgatcgccgagcatcacgtcgcgc
acggcggatgtctga
DBGET
integrated database retrieval system
