Drosophila sechellia: 6619074
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Entry
6619074 CDS
T01064
Name
(RefSeq) LOW QUALITY PROTEIN: aprataxin-like protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
dse
Drosophila sechellia
Pathway
dse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
6619074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dse03400
]
6619074
Enzymes [BR:
dse01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
6619074
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
6619074
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
6619074
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
6619074
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
6619074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
OrsD
zf-C2H2_ZFHX3
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
6619074
NCBI-ProteinID:
XP_002043314
UniProt:
B4IHV4
LinkDB
All DBs
Position
3R:complement(9216194..9218801)
Genome browser
AA seq
611 aa
AA seq
DB search
MSWSNALAKEILKPESLIISSEVAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLPLL
EELHLLAKNVVEVKGVQWQDFNVGFHAEPSMQRLHLHVISRDFVSTSLKTKKHWNSFNTE
LFVPYTKLYAQLDTENRISRLPKSLKDELLAKPLICNQCEFAAKNLPSLKGHLVGHLQDP
KSVCQRTTSADXGTSSFPQKEEESAGLLSYCFDFGNFHGYKKEMEADKLAYFRDELKRKL
NDKRNFLIESDRAVVIKADYPKSQYHFRVVAKEEFRDITQLTEEHLPLLDHMMDLANQII
EKQKHLESRNFLIGFKVNTFWNRLNLHVISDDFYSMAMKRLSHWNSFNSELFMPFQIAYM
MLSVQGSIESISEQSYNKLRNKMPLRCNQCEFVTNMLLDLKAHLYQHWRLKEDERDQKKK
VDKIMKMISETKLDEAEAKPELLPEEPIQTQPVAAIAQYPNENPGKPLTPQQQQAQNSYD
KYINGPPVNMMNQKNPNNPFRNTPHFDRQPQKPPQPRFGPRGPMAPRTGPRFPHKQQHNR
FRAPGFNECRQPHPLYHSGRQQFPNAASVSGGQAGPPGQQQGARPKWNLSKIFNPQNRQN
AVQAQPTNSSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtcaaatgcactagccaaagaaatcttgaaaccagaaagtttgatcatttcc
tcagaagtcgcagtggtcattgccgacaagtttcccaaggcacagcaccactacctggtg
ctgccattggccgacattcccagcatctttcacttgaaccgtagccatctgccgctcttg
gaggagctgcatctgctggccaagaatgttgtggaagtgaaaggagtccagtggcaggat
ttcaacgtaggattccacgcggaacctagcatgcaaaggctccacctgcacgtcatctcc
agggactttgtatcaacaagcttgaagaccaagaagcattggaactcattcaacacagag
ctgtttgtgccctacacaaagctttacgcccagctggatacggagaataggatttcgcga
ctcccgaaatcactgaaagacgagctgctggccaagccactcatttgtaatcagtgcgag
tttgcagcgaaaaatttaccatcactcaaggggcatctggtggggcaccttcaagatccg
aaatcagtttgccagcgaaccactagcgccgactagggaaccagttcattcccacagaaa
gaagaagagtcagctgggctgctttcatattgctttgatttcgggaatttccacggatac
aaaaaggaaatggaggcggataaattggcatatttccgagatgagctgaagcgcaagcta
aatgataagaggaacttccttatcgagagtgaccgggcggttgtcattaaagcggactat
cctaaatcgcaataccactttagggtggtggccaaggaagagttcagggatataactcag
ttaaccgaagaacacctgcccttgctggatcacatgatggatctggcgaatcaaatcatc
gagaagcagaagcacctggagtcgcgtaattttctcatcggtttcaaagtcaacaccttc
tggaatcgtctaaatctccatgttatttctgacgacttctattccatggccatgaaacgt
ctaagtcactggaatagcttcaattcggaactattcatgccctttcaaattgcgtacatg
atgctcagtgttcagggatccattgaatccatttcggagcagtcatacaataagttgcga
aataagatgccattgcgatgcaaccagtgcgaatttgttactaatatgctgctggatctg
aaagctcacttgtatcagcactggcggctcaaggaagacgagcgcgatcagaagaaaaaa
gtcgataaaataatgaaaatgatatctgagaccaaactggatgaggcggaggcaaaaccg
gagctgctgcctgaagaacctattcaaactcagcccgttgctgctatcgcccagtatccc
aatgaaaatccaggcaagcccttaacgccgcaacagcagcaggcccagaatagttacgac
aaatacattaacgggcctcctgtgaacatgatgaatcagaagaatcccaacaatccgttc
cggaacactccgcactttgatagacaaccacagaaaccgccgcagccccgttttgggcca
cgtggaccaatggctcctcggactggtccgcgctttccgcataagcaacagcacaacaga
ttcagggctccaggattcaacgaatgtcgccagcctcatccactgtaccattcaggtcgt
cagcaatttccgaatgctgcatcagtcagtggtggtcaagctgggccgccaggtcagcaa
cagggagctagaccgaaatggaatctaagtaagatattcaatccacagaaccgccagaat
gcagtccaagcccagccaacaaattcatcatcttag
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integrated database retrieval system
