Desulfocapsa sulfexigens: UWK_01089
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Entry
UWK_01089 CDS
T02473
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dsf
Desulfocapsa sulfexigens
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsf03032
]
UWK_01089
03400 DNA repair and recombination proteins [BR:
dsf03400
]
UWK_01089
Enzymes [BR:
dsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UWK_01089
DNA replication proteins [BR:
dsf03032
]
Prokaryotic type
DNA Topoisomerases
UWK_01089
DNA repair and recombination proteins [BR:
dsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UWK_01089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
DUF2691
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AGF77661
UniProt:
M1PMI9
LinkDB
All DBs
Position
1230642..1233056
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AA seq
804 aa
AA seq
DB search
MTEENKDYGAEQIKVLDGLEAVRKRPSMYIGNTAETGLHHLIWEVVDNSIDEALAGHCGR
IYVTIHQDNSVTVEDDGRGIPVAHHPTENMSALELVMTTLHAGGKFDHSSYKVSGGLHGV
GVSVVNALSVKAVAKIKRDGKIHRQEYSYGERIGDLEVIGTTDKTGTSITFQPDPDIFKE
TVVYNYETVNTRLRELAFLNKNVRIYLKDERTGAEDKFHAEGGISEYVEYLNRKRTPINA
VPIFISGEKDNVEVEIAFQYFDGYSERLFSFVNNINTREGGTHVSGFRRSLTKCINRYAS
DDIVPKNMKEKMGGDDVREGLTCVISVRVPDPQFEGQTKTKLGNSEVTSIVDSICTDKLT
LFLEQNPQEAKKILTKAVEAARAREAAKRARELSRKKGSTALFMAGKLAECQEKDPAKRE
IFIVEGDSAGGSAKQGRDRSIQAILPLRGKIMNVEKARFEKILGSEEIKQLIGALGCGIG
REEFDKEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMLPLVEGGFIYIGQPPLYRLGR
GKKEQYFLEEEDLNAHLFNEASQILKIKAQNGADEFIENENLINILKKLSVFNQVVIYLG
RMNIWEDLLYYLLDQDVHSADQFSDEEFVKNIINGLSPEKHIIGNIRPCRWRPSCYEVDI
AIKGQAQIMMTLGPQLPLINEFRTALGLFNDIKSLLRCPFTVLRGVQGSDDKEISVKNWS
EMIKTVRNETFKGSHLQRYKGLGEMNPEQLWDTTMNPQNRSLVKVTIGDAEQADDIFTTL
MGDKVEPRREFIQNHALEVSDLDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaagaaaacaaagattacggtgctgaacaaattaaagttcttgatggtctggaa
gctgttcgaaaaagaccttcaatgtatattggtaatacggctgaaacaggtctccatcat
ctaatatgggaagttgtagataatagtattgatgaggcccttgcaggccattgtggacgt
atttacgtaaccatccatcaggataacagtgtaacagttgaagacgatggtcgtggaatt
cctgtagctcatcatcctactgagaatatgtctgcactggaactggttatgaccacactc
catgcaggaggaaagtttgatcattccagttataaggtttctggtggacttcatggtgta
ggtgtttctgtcgtaaatgcactttctgttaaagcagtggcaaaaattaaacgtgatgga
aaaatccatcgtcaggaatacagttatggtgaacgcataggtgacctcgaagttattggt
acaacagataaaactggaacttctattacttttcagccagatcctgatatttttaaagaa
actgttgtttataattatgaaacggtaaatacccgtcttcgggaacttgcttttctgaat
aaaaatgttcgtatatatcttaaagatgaacgtaccggcgctgaggataagtttcatgct
gaaggcggtataagtgaatatgttgaatatctgaacagaaaacgaacccctataaatgct
gtccccattttcatatccggcgaaaaagacaatgtggaggttgaaatagcttttcagtat
tttgatggctactcagagcgccttttttcttttgtaaataatataaatacccgagaaggt
ggaacacacgtttccggttttagaagatcacttactaaatgtataaatcgttatgcaagt
gatgatatcgtcccaaaaaacatgaaagaaaagatgggtggcgatgatgttcgagaaggc
ttaacttgtgttatttccgtccgagtgccggatccacagtttgaaggacagaccaaaacg
aaattaggtaattccgaagtaacttctatcgtagattcaatctgcacagataaactcact
ctttttctcgaacaaaacccacaggaagcaaaaaaaattctcacaaaggctgtagaagct
gcacgagccagagaagcggcaaaaagagcaagagaactttcccggaaaaaaggatcaacc
gctctttttatggcaggaaaacttgcagagtgtcaggaaaaagatccagcaaagcgtgaa
atatttatagtagagggagattcagctgggggttctgcaaaacaggggcgtgacagatcc
attcaagccattcttcctcttcgtggcaaaattatgaatgttgaaaaggcgcgatttgaa
aagattcttggttctgaagagataaaacaacttattggagcccttggttgcggcattggt
agggaagaatttgataaagaaaaacttcgttatcataagataataattatgacggatgct
gatgtagatggagcacatattcgtacccttctacttaccttcttttacagacaaatgctg
ccgctcgttgaaggcggatttatctatattgggcaaccacctctttatcgtttagggcgt
gggaaaaaagaacagtattttcttgaggaggaagacctcaacgctcatctcttcaatgaa
gccagtcaaattttaaaaattaaggctcaaaatggagctgacgaatttattgagaacgaa
aatcttattaacatactgaagaaactttcagtttttaatcaggtagtaatctatctgggt
agaatgaatatatgggaagacctcctttattatcttctagatcaggatgtacattccgct
gatcagttcagtgatgaagaatttgttaaaaatattataaatggactctctcctgaaaaa
cacataataggtaacattcgtccgtgccgctggcgaccaagttgttacgaggttgatatt
gctattaaaggtcaggcacagattatgatgaccctggggccacaactccctcttattaat
gaatttcgtacggctcttggcctttttaatgatattaaatctttacttcgttgtcctttt
acagtgttaagaggtgttcagggttctgatgataaagaaatatcagttaaaaactggagt
gaaatgataaagactgttcgtaatgaaacctttaaaggaagtcatctacagcgatacaaa
ggtttaggtgaaatgaatcctgaacagctctgggataccacaatgaatccccagaataga
agtttagtcaaagtaactattggagatgcagaacaggctgatgatattttcaccaccctc
atgggagacaaggtggaaccacgcagagaatttattcaaaatcatgctttagaagtttcc
gacctggatatctga
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