Dinoroseobacter shibae: Dshi_1809
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Entry
Dshi_1809 CDS
T00612
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dshi_1809 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_1809 (uvrA)
DNA repair and recombination proteins [BR:
dsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dshi_1809 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dshi_1809 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
BCA_ABC_TP_C
DUF4350
nSTAND1
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
AAA_23
nSTAND3
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABV93551
RoseoBase:
Dshi_1809
UniProt:
A8LMK6
LinkDB
All DBs
Position
complement(1883361..1886222)
Genome browser
AA seq
953 aa
AA seq
DB search
MPELKKIEVRGAREHNLKSIDVDIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGT
PYSPATGLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIIRDRKGEYRKEFLELRKQGFQRV
KVDGAFHDLDSPPTLDKKFRHDIDVVVDRIVVKEGIETRLADSFRTALDLADGIAILETA
PTEGEPERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPACDGLGVELFFDERLVVP
DATLTLANGALAPWRKGKSPYFLQTINAIAKHYEFDPKTPWKALPEKVQEVFLRGSGEEE
ITFRYDEGGRVYQVSRAFEGVIPNMERRYRETDSSWIREEFERYQNNRSCGTCGGYRLRP
EALAVKIAGLHVGEVVQMSIREAHDWCRTVPEHLSVQKNEIARAILKEIRERLGFLNNVG
LEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNL
RDQGNTVIVVEHDEEAVREADYVFDIGPGAGVHGGQVVAHGTPAQIMANPASITGDYLAG
RREIPVPATRRKGNKKKVTVRKATGNNLQDLTVDFPLGKFVCVTGVSGGGKSTLTIETLF
KTASMRLNGARQTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFA
GLPEARTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKGKRYNRETL
EVTFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQ
RVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVVIEHNLDVIK
TADWLIDIGPEGGDGGGTLVATGTPEQVAEVAESHTGRYLKPMLAGAKRVAAE
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgaagaagatcgaggtgcgcggcgcgcgcgagcacaacctcaaatccatc
gacgtggacattccccgcgaccggctggtcgtgatcaccgggctgtcgggctcgggcaag
tcgtcgcttgccttcgacacgatctatgccgagggccagcgccgctatgtcgagagcctc
agcgcctatgcgcgccagttcctcgacatgatgcagaagcccgatgtggatcacatctcg
ggcctgagcccggcgatctcgatcgagcagaagacgacctcgaagaacccgcgctccacc
gtcggtacggtgacggaaatctacgactacatgcggctgctcttcgcgcgggtcggcaca
ccctacagccccgccaccggtctgcccatcgaagcacagcaggtgcaggacatggtggac
cgggtgatggcgatggaggaggggacgcgcgcctacctgctggccccgatcatccgcgac
cgcaagggcgaataccgcaaggaattcctggagctgcgcaagcaggggttccagcgggtg
aaggtcgacggcgcattccacgacctcgacagcccgcccacgctggacaagaaattccgc
cacgatatcgacgtggtggtggaccggatcgttgtgaaggaggggatcgagacccggctg
gccgacagcttccgcaccgcactcgaccttgccgacgggatcgcgatcctggagaccgcc
ccgacggagggggagccggagcggcacacgttctcggaaaaattcgcctgtccggtgtcg
ggcttcaccattccggaaatcgagccgcggttgttttcgttcaacgcgcccttcggggcc
tgcccggcctgcgacgggttgggcgtcgagctgttcttcgacgagcgcctcgtggtgccg
gatgccacgctgacgctggccaacggggcgctggcgccctggcgcaagggcaagtcgccc
tatttcctgcagaccatcaacgccatcgccaagcattacgaattcgaccccaagaccccg
tggaaggccctgcccgaaaaggtgcaggaggtgttcctgcgcggctccggcgaggaagag
atcaccttccgctatgacgagggcggccgggtctatcaggtcagccgtgccttcgagggg
gtgatccccaacatggagcggcgctaccgcgaaaccgacagcagttggatccgggaggag
ttcgagcgctatcagaacaaccgctcctgcgggacctgcggcggctatcgcctgcggccc
gaggcgctggcggtgaagattgccgggctccatgtgggcgaggtggtgcagatgtcgatc
cgggaggcgcatgactggtgccggaccgtgccggagcacctgagcgtgcagaagaacgag
atcgcccgcgctatcctcaaggagatccgcgaacggctcggctttctcaacaatgtgggt
ctcgaatacctcacgctcagccgcaatgccgggaccctgtcgggaggcgagagccagcgc
atccggctggcgagccagatcggatcggggctgaccggggtgctctatgtgctcgacgag
ccgtccatcgggctgcaccagcgcgataatgaccggctgctgacgactctgaagaacctg
cgcgaccagggcaatacggtgatcgtggtcgagcatgacgaggaggccgtgcgggaggcc
gattacgttttcgacatcggccccggcgcgggggtgcatggcggccaggtggtggcccat
ggcacgccggcccagatcatggccaacccggcctcgatcaccggcgattacctcgccggg
cggcgcgagatcccggtgcccgccacccgccgcaagggtaacaagaaaaaggtcacggtg
cgcaaggccacgggcaacaacctgcaggacctgacggtggatttccccctgggcaagttc
gtctgcgtgaccggcgtgtcggggggcggcaagtccaccctgaccatcgagaccctgttc
aagaccgcgtccatgcggctgaacggggcgcgccagacgccggcaccctgcgagacgatc
aaggggttggagcatctcgacaaggtcatcgatatcgaccagcggcccatcgggcgcacg
ccgcggtcgaacccggcgacctacacgggcgcgttcacgccgatccgcgactggttcgcc
gggctgcccgaggccaggacgcgcggctacaagccggggcggttttccttcaacgtgaag
ggcgggcgctgcgaggcgtgccaaggcgacggggtgatcaagatcgagatgcactttttg
ccggatgtctatgtcgaatgcgagacctgcaagggcaagcggtacaaccgcgagaccctg
gaggtgacattcaagggcaagtccatcgccgatgtgctggacatgacggtcgaggatgcg
caggagttcttcaaggcggtgccgtcgatccgcgagaagatggatgcgctgatgcgcgtc
gggctcggctatatcaaggtgggccagcaggcgacgaccctctcgggcggcgaggcgcag
cgcgtcaagctcagcaaggagttggccaagcggtccacgggccggacgctctatatcctg
gacgagccgaccacggggctgcatttcgaggatgtccgcaagctgctggaggtgctgcac
gagttggtggagcagggcaacaccgtggtggtgatcgagcacaacctcgatgtgatcaag
accgccgactggctgatcgatatcggccccgaaggcggggacgggggcggcacgctggtg
gccacgggcacgccggagcaggtggccgaggtcgccgagagccacacgggccgctacctc
aagcccatgctcgcgggcgccaagcgggtcgcggcggaatag
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