Dinoroseobacter shibae: Dshi_3477
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Entry
Dshi_3477 CDS
T00612
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00362
Benzoate degradation
dsh01100
Metabolic pathways
dsh01120
Microbial metabolism in diverse environments
dsh01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Dshi_3477 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
Dshi_3477 (pcaH)
Enzymes [BR:
dsh01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Dshi_3477 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ABV95210
RoseoBase:
Dshi_3477
UniProt:
A8LPE5
LinkDB
All DBs
Position
complement(3660122..3660859)
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AA seq
245 aa
AA seq
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MTDAPKPGGYFPRDRGWHPPALSPAYKTTVKRAPSLAPLSFPTSLGEETGPVFGHETLGP
LDGDLIHNFAGLENPAIGPRIVVHGRVLDERARPVPGALIEIWQANAGGRYRHRNESYLA
PLDPHFGGCGRVISREDGSYEFRTVMPGPYPWPNGMNDWRPAHIHLSIFGPAFAQRLVTQ
MYFEGDPLIWLCPIVGAIPSRAAIESLIAPVDSARNIPMDARAYKFDIVLRGRRQTMFEN
RKDGM
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgcaccgaaacccggcgggtacttcccgcgcgaccggggctggcatccgccc
gcgctcagccccgcgtacaagaccacggtgaaacgggcgcccagcttggcgcccctgtct
ttccccaccagcctcggcgaagagaccggtccggtattcgggcatgagacgctcggcccg
ctcgacggcgatctgatccacaacttcgcgggtcttgagaatcccgccatcgggccgcgc
atcgtggttcatggccgggtgctggacgagcgcgcgcgcccggtgcctggggcgctgatc
gagatctggcaggccaatgcaggcggacgctaccgccaccggaacgaaagctacctcgcc
ccgttggacccgcatttcggcggatgtgggcgcgtgatttcgcgcgaggatgggtcctac
gagtttcggacggtgatgcccggaccctacccttggcccaatggtatgaacgactggcgc
ccggcccatatccatctgtcgatcttcgggcccgcattcgcccagcggctggtgacacag
atgtatttcgagggcgatccgctgatctggctgtgcccgatcgtgggtgccattccctcg
cgggcagcgatcgagagcctgatcgcgccggtcgacagcgcccggaacatccccatggac
gcgcgcgcctacaagttcgacatcgtgctgcgcgggcgacgccagaccatgttcgaaaac
cggaaggacgggatgtga
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